RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 IFITM5A6NNB3 132 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 H3BSH0 61 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 GPR171O14626 319 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 CBR3O75828 277 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 P04436 131 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 ZNF43P17038 809 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 CAMK2DQ13557 499 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 THEM4Q5T1C6 240 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 STAC2Q6ZMT1 411 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 DCXRQ7Z4W1 244 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 LINC00346Q8IVM7 164 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 ESX1Q8N693 406 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 IL17RDQ8NFM7 739 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 OR10AC1Q8NH08 325 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 NTNG2Q96CW9 530 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 MRPL13Q9BYD1 178 aaKnown RBP13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 KLHL13Q9P2N7 655 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 A0A1W2PNU3 283 aaPredicted RBP13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 ANKRD61A6NGH8 418 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 AQP7P3A6NL99 342 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 ZNF814B7Z6K7 855 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 AIPO00170 330 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 ZIC3O60481 467 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 AQP8O94778 261 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 PNPP00491 289 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 IGHG1P01857 330 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 RAF1P04049 648 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 SERPINA7P05543 415 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 PRKAR1AP10644 381 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 TOMM20Q15388 145 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 PYHIN1Q6K0P9 492 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 MZT2BQ6NZ67 158 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 DHRS13Q6UX07 377 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 HDDC2Q7Z4H3 204 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 RAB43Q86YS6 212 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 OR10H5Q8NGA6 315 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 OR51A4Q8NGJ6 313 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 TSEN15Q8WW01 171 aaKnown RBP13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 TMEM106AQ96A25 262 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 SLC25A44Q96H78 314 aaPredicted RBP13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 TMEM41AQ96HV5 264 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 WACQ9BTA9 647 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 SLC22A13Q9Y226 551 aa13.72□□□□□ -0.21
RPUSD3-215ENST00000475470 TRAF3IP2O43734 574 aaPredicted RBP13.71□□□□□ -0.21
RPUSD3-215ENST00000475470 PMS2P2O95744 297 aa13.71□□□□□ -0.21
RPUSD3-215ENST00000475470 WNT11O96014 354 aa13.71□□□□□ -0.21
RPUSD3-215ENST00000475470 HRGP04196 525 aa13.71□□□□□ -0.21
RPUSD3-215ENST00000475470 EIF3IQ13347 325 aaKnown RBP13.71□□□□□ -0.21
RPUSD3-215ENST00000475470 PCK2Q16822 640 aa13.71□□□□□ -0.21
RPUSD3-215ENST00000475470 ACER2Q5QJU3 275 aa13.71□□□□□ -0.21
RPUSD3-215ENST00000475470 ZNF57Q68EA5 555 aaPredicted RBP13.71□□□□□ -0.21
RPUSD3-215ENST00000475470 NOXO1Q8NFA2 376 aa13.71□□□□□ -0.21
RPUSD3-215ENST00000475470 ENKURQ8TC29 256 aa13.71□□□□□ -0.21
RPUSD3-215ENST00000475470 LGALS14Q8TCE9 139 aa13.71□□□□□ -0.21
RPUSD3-215ENST00000475470 TRBV5-7A0A0A0MS05 114 aa13.71□□□□□ -0.22
RPUSD3-215ENST00000475470 OR2M5A3KFT3 312 aa13.71□□□□□ -0.22
RPUSD3-215ENST00000475470 SLC43A1O75387 559 aa13.71□□□□□ -0.22
RPUSD3-215ENST00000475470 PGA4P0DJD7 388 aa13.71□□□□□ -0.22
RPUSD3-215ENST00000475470 PGA3P0DJD8 388 aa13.71□□□□□ -0.22
RPUSD3-215ENST00000475470 DLSTP36957 453 aa13.71□□□□□ -0.22
RPUSD3-215ENST00000475470 DNASE1L1P49184 302 aa13.71□□□□□ -0.22
RPUSD3-215ENST00000475470 ZNF239Q16600 458 aaKnown RBP13.71□□□□□ -0.22
RPUSD3-215ENST00000475470 CARD17Q5XLA6 110 aa13.71□□□□□ -0.22
RPUSD3-215ENST00000475470 H3F3CQ6NXT2 135 aa13.71□□□□□ -0.22
RPUSD3-215ENST00000475470 OR6X1Q8NH79 312 aa13.71□□□□□ -0.22
RPUSD3-215ENST00000475470 ADAMTS14Q8WXS8 1223 aa13.71□□□□□ -0.22
RPUSD3-215ENST00000475470 C11orf40Q8WZ69 217 aa13.71□□□□□ -0.22
RPUSD3-215ENST00000475470 THRSPQ92748 146 aa13.71□□□□□ -0.22
RPUSD3-215ENST00000475470 THAP7Q9BT49 309 aaPredicted RBP13.71□□□□□ -0.22
RPUSD3-215ENST00000475470 MMP28Q9H239 520 aa13.71□□□□□ -0.22
RPUSD3-215ENST00000475470 SDK2Q58EX2 2172 aa13.7□□□□□ -0.22
RPUSD3-215ENST00000475470 A0A1W2PPL8 197 aa13.7□□□□□ -0.22
RPUSD3-215ENST00000475470 ZNF726A6NNF4 738 aa13.7□□□□□ -0.22
RPUSD3-215ENST00000475470 TFECO14948 347 aaPredicted RBP13.7□□□□□ -0.22
RPUSD3-215ENST00000475470 RAD1O60671 282 aa13.7□□□□□ -0.22
RPUSD3-215ENST00000475470 RAMP1O60894 148 aa13.7□□□□□ -0.22
RPUSD3-215ENST00000475470 TMEM127O75204 238 aa13.7□□□□□ -0.22
RPUSD3-215ENST00000475470 LAP3P28838 519 aa13.7□□□□□ -0.22
RPUSD3-215ENST00000475470 MAP2K3P46734 347 aa13.7□□□□□ -0.22
RPUSD3-215ENST00000475470 MFGE8Q08431 387 aaPredicted RBP13.7□□□□□ -0.22
RPUSD3-215ENST00000475470 SPEM2Q0P670 501 aa13.7□□□□□ -0.22
RPUSD3-215ENST00000475470 UBE2NLQ5JXB2 153 aa13.7□□□□□ -0.22
RPUSD3-215ENST00000475470 CORO6Q6QEF8 472 aa13.7□□□□□ -0.22
RPUSD3-215ENST00000475470 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.7□□□□□ -0.22
RPUSD3-215ENST00000475470 ST7LQ8TDW4 575 aa13.7□□□□□ -0.22
RPUSD3-215ENST00000475470 RFT1Q96AA3 541 aa13.7□□□□□ -0.22
RPUSD3-215ENST00000475470 ABHD1Q96SE0 405 aa13.7□□□□□ -0.22
RPUSD3-215ENST00000475470 LOC102725191A0A1B0GVB3 256 aa13.7□□□□□ -0.22
RPUSD3-215ENST00000475470 LYRM1O43325 122 aa13.7□□□□□ -0.22
RPUSD3-215ENST00000475470 GALR2O43603 387 aaPredicted RBP13.7□□□□□ -0.22
RPUSD3-215ENST00000475470 MAS1P04201 325 aa13.7□□□□□ -0.22
RPUSD3-215ENST00000475470 KLK2P20151 261 aa13.7□□□□□ -0.22
RPUSD3-215ENST00000475470 TPTEP56180 551 aa13.7□□□□□ -0.22
RPUSD3-215ENST00000475470 PITPNAQ00169 270 aa13.7□□□□□ -0.22
RPUSD3-215ENST00000475470 AKAP14Q86UN6 197 aa13.7□□□□□ -0.22
RPUSD3-215ENST00000475470 CATSPERDQ86XM0 798 aa13.7□□□□□ -0.22
RPUSD3-215ENST00000475470 PPP1R14AQ96A00 147 aa13.7□□□□□ -0.22
RPUSD3-215ENST00000475470 CMTM3Q96MX0 182 aa13.7□□□□□ -0.22
RPUSD3-215ENST00000475470 PIGQQ9BRB3 760 aa13.7□□□□□ -0.22
RPUSD3-215ENST00000475470 GPR87Q9BY21 358 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms