RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 CNTNAP3BQ96NU0 1288 aa11.77□□□□□ -0.52
CCNL1-216ENST00000475298 VRK1Q99986 396 aaPredicted RBP11.77□□□□□ -0.52
CCNL1-216ENST00000475298 MFRPQ9BY79 579 aa11.77□□□□□ -0.52
CCNL1-216ENST00000475298 CHST6Q9GZX3 395 aa11.77□□□□□ -0.52
CCNL1-216ENST00000475298 POLE3Q9NRF9 147 aa11.77□□□□□ -0.52
CCNL1-216ENST00000475298 FOXJ3Q9UPW0 622 aa11.77□□□□□ -0.52
CCNL1-216ENST00000475298 SLC35A3Q9Y2D2 325 aa11.77□□□□□ -0.52
CCNL1-216ENST00000475298 ZNF337Q9Y3M9 751 aa11.77□□□□□ -0.52
CCNL1-216ENST00000475298 HS3ST3A1Q9Y663 406 aa11.77□□□□□ -0.52
CCNL1-216ENST00000475298 SLC22A31A6NKX4 558 aa11.77□□□□□ -0.53
CCNL1-216ENST00000475298 AK1P00568 194 aa11.77□□□□□ -0.53
CCNL1-216ENST00000475298 CD79AP11912 226 aa11.77□□□□□ -0.53
CCNL1-216ENST00000475298 CTSEP14091 401 aa11.77□□□□□ -0.53
CCNL1-216ENST00000475298 NDUFB7P17568 137 aa11.77□□□□□ -0.53
CCNL1-216ENST00000475298 SLC2A5P22732 501 aa11.77□□□□□ -0.53
CCNL1-216ENST00000475298 LAP3P28838 519 aa11.77□□□□□ -0.53
CCNL1-216ENST00000475298 AGTR1P30556 359 aa11.77□□□□□ -0.53
CCNL1-216ENST00000475298 CDNFQ49AH0 187 aa11.77□□□□□ -0.53
CCNL1-216ENST00000475298 KIRREL2Q6UWL6 708 aa11.77□□□□□ -0.53
CCNL1-216ENST00000475298 ARHGEF39Q8N4T4 335 aa11.77□□□□□ -0.53
CCNL1-216ENST00000475298 ARRDC1Q8N5I2 433 aa11.77□□□□□ -0.53
CCNL1-216ENST00000475298 FAM160A2Q8N612 972 aaPredicted RBP11.77□□□□□ -0.53
CCNL1-216ENST00000475298 C15orf54Q8N8G6 183 aa11.77□□□□□ -0.53
CCNL1-216ENST00000475298 OR4K13Q8NH42 304 aa11.77□□□□□ -0.53
CCNL1-216ENST00000475298 SMPDL3BQ92485 455 aa11.77□□□□□ -0.53
CCNL1-216ENST00000475298 C14orf79Q96F83 325 aa11.77□□□□□ -0.53
CCNL1-216ENST00000475298 RHOVQ96L33 236 aa11.77□□□□□ -0.53
CCNL1-216ENST00000475298 ALX4Q9H161 411 aaPredicted RBP11.77□□□□□ -0.53
CCNL1-216ENST00000475298 C8orf33Q9H7E9 229 aaPredicted RBP11.77□□□□□ -0.53
CCNL1-216ENST00000475298 TMEM138Q9NPI0 162 aa11.77□□□□□ -0.53
CCNL1-216ENST00000475298 ST6GALNAC2Q9UJ37 374 aa11.77□□□□□ -0.53
CCNL1-216ENST00000475298 COL4A2P08572 1712 aa11.77□□□□□ -0.53
CCNL1-216ENST00000475298 KIR2DS5A0A0G2JLQ3 304 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 A0A0G2JNG1 304 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 SPTY2D1-AS1A0A0U1RR47 76 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 A0A1B0GWJ7 208 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 SHISA7A6NL88 538 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 PRAMEF26H0Y7S4 382 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 KIR2DS3K7RE56 304 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 OR2F2O95006 317 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 CD8AP01732 235 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 ANXA2P07355 339 aaKnown RBP11.76□□□□□ -0.53
CCNL1-216ENST00000475298 HGFACQ04756 655 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 OR2F1Q13607 317 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 KIR2DS5Q14953 304 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 PON3Q15166 354 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 ARMC6Q6NXE6 501 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 ETV3LQ6ZN32 361 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 FCRLAQ7L513 359 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 SLC43A2Q8N370 569 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 RCBTB1Q8NDN9 531 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 OR52E2Q8NGJ4 325 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 RLN3Q8WXF3 142 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 ASB13Q8WXK3 278 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 ZMYND19Q96E35 227 aaPredicted RBP11.76□□□□□ -0.53
CCNL1-216ENST00000475298 CLCC1Q96S66 551 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 GPR174Q9BXC1 333 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 TREM1Q9NP99 234 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 LRIT1Q9P2V4 623 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 ATXN7L1Q9ULK2 861 aaPredicted RBP11.76□□□□□ -0.53
CCNL1-216ENST00000475298 MMP17Q9ULZ9 603 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 ADAM18Q9Y3Q7 739 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 CACNA1IQ9P0X4 2223 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.76□□□□□ -0.53
CCNL1-216ENST00000475298 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.76□□□□□ -0.53
CCNL1-216ENST00000475298 FAM221BA6H8Z2 402 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 FADS1O60427 444 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 NQO2P16083 231 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 MAOAP21397 527 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 SDHAP31040 664 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 PYCR1P32322 319 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 RPS11P62280 158 aaKnown RBP eCLIP11.76□□□□□ -0.53
CCNL1-216ENST00000475298 GFOD2Q3B7J2 385 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 TP53I3Q53FA7 332 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 GLT8D1Q68CQ7 371 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 CDPF1Q6NVV7 123 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 SSX9Q7RTT3 188 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 SLC29A4Q7RTT9 530 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 OVCH1Q7RTY7 1134 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.76□□□□□ -0.53
CCNL1-216ENST00000475298 LRRTM1Q86UE6 522 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 ZNF561Q8N587 486 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 C19orf47Q8N9M1 422 aaKnown RBP11.76□□□□□ -0.53
CCNL1-216ENST00000475298 TCTEX1D2Q8WW35 142 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 TMEM68Q96MH6 324 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 VSTM2LQ96N03 204 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 LMF1Q96S06 567 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 RSRP1Q9BUV0 290 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 ZNF426Q9BUY5 554 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 SEMA6CQ9H3T2 930 aa11.76□□□□□ -0.53
CCNL1-216ENST00000475298 RCC2Q9P258 522 aaKnown RBP11.76□□□□□ -0.53
CCNL1-216ENST00000475298 OR5H14A6NHG9 310 aa11.75□□□□□ -0.53
CCNL1-216ENST00000475298 RHPN2P1A8MT19 583 aa11.75□□□□□ -0.53
CCNL1-216ENST00000475298 MCIDASD6RGH6 385 aa11.75□□□□□ -0.53
CCNL1-216ENST00000475298 TERTO14746 1132 aaKnown RBP11.75□□□□□ -0.53
CCNL1-216ENST00000475298 SLC31A2O15432 143 aa11.75□□□□□ -0.53
CCNL1-216ENST00000475298 FOXS1O43638 330 aa11.75□□□□□ -0.53
CCNL1-216ENST00000475298 HIST1H1CP16403 213 aaKnown RBP11.75□□□□□ -0.53
CCNL1-216ENST00000475298 MNDAP41218 407 aa11.75□□□□□ -0.53
CCNL1-216ENST00000475298 NAA10P41227 235 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms