RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 MPV17P39210 176 aa10.62□□□□□ -0.71
SKA3-206ENST00000475251 DAP3P51398 398 aaKnown RBP10.62□□□□□ -0.71
SKA3-206ENST00000475251 BTG1P62324 171 aa10.62□□□□□ -0.71
SKA3-206ENST00000475251 MRPS34P82930 218 aaKnown RBP10.62□□□□□ -0.71
SKA3-206ENST00000475251 HIST3H3Q16695 136 aa10.62□□□□□ -0.71
SKA3-206ENST00000475251 MTX3Q5HYI7 312 aa10.62□□□□□ -0.71
SKA3-206ENST00000475251 C10orf128Q5T292 105 aa10.62□□□□□ -0.71
SKA3-206ENST00000475251 LRIF1Q5T3J3 769 aa10.62□□□□□ -0.71
SKA3-206ENST00000475251 FAM205BPQ63HN1 556 aa10.62□□□□□ -0.71
SKA3-206ENST00000475251 SLC2A7Q6PXP3 512 aa10.62□□□□□ -0.71
SKA3-206ENST00000475251 ARL9Q6T311 187 aa10.62□□□□□ -0.71
SKA3-206ENST00000475251 LRRN1Q6UXK5 716 aa10.62□□□□□ -0.71
SKA3-206ENST00000475251 NANOGNBQ7Z5D8 188 aa10.62□□□□□ -0.71
SKA3-206ENST00000475251 LRRC28Q86X40 367 aaPredicted RBP10.62□□□□□ -0.71
SKA3-206ENST00000475251 ZNF101Q8IZC7 436 aa10.62□□□□□ -0.71
SKA3-206ENST00000475251 OR9I1Q8NGQ6 314 aa10.62□□□□□ -0.71
SKA3-206ENST00000475251 OR4F5Q8NH21 305 aa10.62□□□□□ -0.71
SKA3-206ENST00000475251 ABHD4Q8TB40 342 aa10.62□□□□□ -0.71
SKA3-206ENST00000475251 THOC1Q96FV9 657 aaKnown RBP10.62□□□□□ -0.71
SKA3-206ENST00000475251 MPP4Q96JB8 637 aa10.62□□□□□ -0.71
SKA3-206ENST00000475251 POM121L2Q96KW2 1035 aa10.62□□□□□ -0.71
SKA3-206ENST00000475251 ZNF347Q96SE7 839 aa10.62□□□□□ -0.71
SKA3-206ENST00000475251 CCT8L2Q96SF2 557 aa10.62□□□□□ -0.71
SKA3-206ENST00000475251 RSPO3Q9BXY4 272 aaPredicted RBP10.62□□□□□ -0.71
SKA3-206ENST00000475251 OR2J1Q9GZK6 312 aa10.62□□□□□ -0.71
SKA3-206ENST00000475251 SMURF2Q9HAU4 748 aa10.62□□□□□ -0.71
SKA3-206ENST00000475251 ELOVL3Q9HB03 270 aa10.62□□□□□ -0.71
SKA3-206ENST00000475251 NPHS2Q9NP85 383 aa10.62□□□□□ -0.71
SKA3-206ENST00000475251 ARMCX1Q9P291 453 aa10.62□□□□□ -0.71
SKA3-206ENST00000475251 ANGPT4Q9Y264 503 aa10.62□□□□□ -0.71
SKA3-206ENST00000475251 ARHGAP32A7KAX9 2087 aa10.61□□□□□ -0.71
SKA3-206ENST00000475251 EVPLLA8MZ36 301 aa10.61□□□□□ -0.71
SKA3-206ENST00000475251 TIMM23O14925 209 aa10.61□□□□□ -0.71
SKA3-206ENST00000475251 SURF4O15260 269 aa10.61□□□□□ -0.71
SKA3-206ENST00000475251 TIMM8AO60220 97 aaPredicted RBP10.61□□□□□ -0.71
SKA3-206ENST00000475251 TPST2O60704 377 aa10.61□□□□□ -0.71
SKA3-206ENST00000475251 ICMTO60725 284 aa10.61□□□□□ -0.71
SKA3-206ENST00000475251 TGDSO95455 350 aa10.61□□□□□ -0.71
SKA3-206ENST00000475251 ASAH2BP0C7U1 165 aa10.61□□□□□ -0.71
SKA3-206ENST00000475251 ZNF32P17041 273 aa10.61□□□□□ -0.71
SKA3-206ENST00000475251 TUBG1P23258 451 aa10.61□□□□□ -0.71
SKA3-206ENST00000475251 WNT5AP41221 380 aa10.61□□□□□ -0.71
SKA3-206ENST00000475251 ZNF133P52736 654 aaPredicted RBP10.61□□□□□ -0.71
SKA3-206ENST00000475251 STX1BP61266 288 aa10.61□□□□□ -0.71
SKA3-206ENST00000475251 PPP1CBP62140 327 aa10.61□□□□□ -0.71
SKA3-206ENST00000475251 PAX8Q06710 450 aa10.61□□□□□ -0.71
SKA3-206ENST00000475251 ZNF283Q8N7M2 679 aa10.61□□□□□ -0.71
SKA3-206ENST00000475251 WFDC12Q8WWY7 111 aa10.61□□□□□ -0.71
SKA3-206ENST00000475251 SAMD8Q96LT4 415 aa10.61□□□□□ -0.71
SKA3-206ENST00000475251 SEPHS2Q99611 448 aa10.61□□□□□ -0.71
SKA3-206ENST00000475251 MRPL13Q9BYD1 178 aaKnown RBP10.61□□□□□ -0.71
SKA3-206ENST00000475251 TUBG2Q9NRH3 451 aa10.61□□□□□ -0.71
SKA3-206ENST00000475251 KLHL21Q9UJP4 597 aa10.61□□□□□ -0.71
SKA3-206ENST00000475251 ZNF281Q9Y2X9 895 aa10.61□□□□□ -0.71
SKA3-206ENST00000475251 GMEB1Q9Y692 573 aa10.61□□□□□ -0.71
SKA3-206ENST00000475251 F5H0A9 414 aaPredicted RBP10.6□□□□□ -0.71
SKA3-206ENST00000475251 BLOC1S5-TXNDC5H3BN57 136 aa10.6□□□□□ -0.71
SKA3-206ENST00000475251 IFNL4K9M1U5 179 aa10.6□□□□□ -0.71
SKA3-206ENST00000475251 SNNO75324 88 aaPredicted RBP10.6□□□□□ -0.71
SKA3-206ENST00000475251 GPANK1O95872 356 aa10.6□□□□□ -0.71
SKA3-206ENST00000475251 ACADSP16219 412 aa10.6□□□□□ -0.71
SKA3-206ENST00000475251 HOXB9P17482 250 aaPredicted RBP10.6□□□□□ -0.71
SKA3-206ENST00000475251 GSTM3P21266 225 aa10.6□□□□□ -0.71
SKA3-206ENST00000475251 AQP1P29972 269 aa10.6□□□□□ -0.71
SKA3-206ENST00000475251 MDH2P40926 338 aaKnown RBP10.6□□□□□ -0.71
SKA3-206ENST00000475251 GUCA1AP43080 201 aaPredicted RBP10.6□□□□□ -0.71
SKA3-206ENST00000475251 BPIFB3P59826 476 aa10.6□□□□□ -0.71
SKA3-206ENST00000475251 PCBD1P61457 104 aa10.6□□□□□ -0.71
SKA3-206ENST00000475251 VSNL1P62760 191 aa10.6□□□□□ -0.71
SKA3-206ENST00000475251 CDK5R2Q13319 367 aa10.6□□□□□ -0.71
SKA3-206ENST00000475251 TAF11Q15544 211 aa10.6□□□□□ -0.71
SKA3-206ENST00000475251 ENTPD8Q5MY95 495 aa10.6□□□□□ -0.71
SKA3-206ENST00000475251 BRICD5Q6PL45 260 aa10.6□□□□□ -0.71
SKA3-206ENST00000475251 NPEPL1Q8NDH3 523 aa10.6□□□□□ -0.71
SKA3-206ENST00000475251 VANGL1Q8TAA9 524 aaPredicted RBP10.6□□□□□ -0.71
SKA3-206ENST00000475251 ADAMTS16Q8TE57 1224 aa10.6□□□□□ -0.71
SKA3-206ENST00000475251 AENQ8WTP8 325 aaKnown RBP10.6□□□□□ -0.71
SKA3-206ENST00000475251 UPRTQ96BW1 309 aa10.6□□□□□ -0.71
SKA3-206ENST00000475251 MAGEB18Q96M61 343 aa10.6□□□□□ -0.71
SKA3-206ENST00000475251 ARHGDIGQ99819 225 aa10.6□□□□□ -0.71
SKA3-206ENST00000475251 MSL2Q9HCI7 577 aa10.6□□□□□ -0.71
SKA3-206ENST00000475251 MAN2C1Q9NTJ4 1040 aa10.6□□□□□ -0.71
SKA3-206ENST00000475251 SLC25A37Q9NYZ2 338 aa10.6□□□□□ -0.71
SKA3-206ENST00000475251 NDRG4Q9ULP0 352 aaKnown RBP10.6□□□□□ -0.71
SKA3-206ENST00000475251 PPP1R3CQ9UQK1 317 aa10.6□□□□□ -0.71
SKA3-206ENST00000475251 LOC100509620A0A075B734 347 aa10.59□□□□□ -0.71
SKA3-206ENST00000475251 TRAV40A0A0B4J280 105 aa10.59□□□□□ -0.71
SKA3-206ENST00000475251 TRAPPC13A5PLN9 417 aa10.59□□□□□ -0.71
SKA3-206ENST00000475251 CPSF4LA6NMK7 179 aaKnown RBP10.59□□□□□ -0.71
SKA3-206ENST00000475251 M0R3H8 397 aa10.59□□□□□ -0.71
SKA3-206ENST00000475251 KPNA4O00629 521 aaPredicted RBP10.59□□□□□ -0.71
SKA3-206ENST00000475251 TRMUO75648 421 aaKnown RBP10.59□□□□□ -0.71
SKA3-206ENST00000475251 PLATP00750 562 aa10.59□□□□□ -0.71
SKA3-206ENST00000475251 IGHV4-38-2P0DP08 117 aa10.59□□□□□ -0.71
SKA3-206ENST00000475251 GPX2P18283 190 aa10.59□□□□□ -0.71
SKA3-206ENST00000475251 OMGP23515 440 aa10.59□□□□□ -0.71
SKA3-206ENST00000475251 RAG2P55895 527 aa10.59□□□□□ -0.71
SKA3-206ENST00000475251 SEC61A1P61619 476 aaKnown RBP10.59□□□□□ -0.71
SKA3-206ENST00000475251 PSG4Q00888 419 aa10.59□□□□□ -0.71
SKA3-206ENST00000475251 NPTX1Q15818 432 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms