RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 TIA1P31483 386 aaKnown RBP eCLIP4.38□□□□□ -1.71
NPHP3-206ENST00000474871 NUMBP49757 651 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 TAS2R39P59534 338 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 RAB5BP61020 215 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 NCS1P62166 190 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.38□□□□□ -1.71
NPHP3-206ENST00000474871 HSPB2Q16082 182 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 TDRG1Q3Y452 100 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 ARL13AQ5H913 290 aaPredicted RBP4.38□□□□□ -1.71
NPHP3-206ENST00000474871 SAMD13Q5VXD3 122 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 LAIR1Q6GTX8 287 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 PARS2Q7L3T8 475 aaKnown RBP4.38□□□□□ -1.71
NPHP3-206ENST00000474871 MAVSQ7Z434 540 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 C8orf59Q8N0T1 100 aaPredicted RBP4.38□□□□□ -1.71
NPHP3-206ENST00000474871 RNF148Q8N7C7 305 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 NODALQ96S42 347 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 SOSTQ9BQB4 213 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 TLNRD1Q9H1K6 362 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 FLRT1Q9NZU1 646 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 MED11Q9P086 117 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 CHST2Q9Y4C5 530 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 RALGAPA2Q2PPJ7 1873 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 FAM90A27PA6NNH2 459 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 CORTO00230 105 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 MAN2B1O00754 1011 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 MSTNO14793 375 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 OXTP01178 125 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 FSHRP23945 695 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 RPA3P35244 121 aaPredicted RBP4.38□□□□□ -1.71
NPHP3-206ENST00000474871 MNDAP41218 407 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 MTNR1BP49286 362 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 ATP5IP56385 69 aaPredicted RBP4.38□□□□□ -1.71
NPHP3-206ENST00000474871 ADIGQ0VDE8 80 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 DOC2BQ14184 412 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 CYP51A1Q16850 503 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 FAM71E1Q6IPT2 247 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 C16orf46Q6P387 395 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 AHSA2Q719I0 299 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 MRPL41Q8IXM3 137 aaKnown RBP4.38□□□□□ -1.71
NPHP3-206ENST00000474871 CCDC90BQ9GZT6 254 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 GPR27Q9NS67 375 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 POMT2Q9UKY4 750 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 ENPP4Q9Y6X5 453 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 PDCD11Q14690 1871 aaKnown RBP4.38□□□□□ -1.71
NPHP3-206ENST00000474871 A0A1B0GW55 424 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 SERINC4A6NH21 518 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 FAM90A20PA6NIJ5 464 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 LIPT2A6NK58 231 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 ZNF561-AS1K7EIQ3 104 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 ZNF195O14628 629 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 OR2F2O95006 317 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 NUDT14O95848 222 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 VIPP01282 170 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 DUX4L2P0CJ85 424 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 DUX4L3P0CJ86 424 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 DUX4L4P0CJ87 422 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 DUX4L5P0CJ88 424 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 DUX4L6P0CJ89 424 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 DUX4L7P0CJ90 424 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 CCL5P13501 91 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 IDSP22304 550 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 CHI3L1P36222 383 aaPredicted RBP4.38□□□□□ -1.71
NPHP3-206ENST00000474871 RPS7P62081 194 aaKnown RBP4.38□□□□□ -1.71
NPHP3-206ENST00000474871 CRYZQ08257 329 aaKnown RBP4.38□□□□□ -1.71
NPHP3-206ENST00000474871 NEDD8Q15843 81 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 TFDP3Q5H9I0 405 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 ZNF766Q5HY98 468 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 ENPP6Q6UWR7 440 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 WDR82Q6UXN9 313 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 RNF130Q86XS8 419 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 OR2AK2Q8NG84 335 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 RXFP2Q8WXD0 754 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 POP5Q969H6 163 aaKnown RBP4.38□□□□□ -1.71
NPHP3-206ENST00000474871 ESAMQ96AP7 390 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 WRAP53Q9BUR4 548 aaKnown RBP4.38□□□□□ -1.71
NPHP3-206ENST00000474871 ADI1Q9BV57 179 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 PRRG4Q9BZD6 226 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 ZNF581Q9P0T4 197 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 HCN3Q9P1Z3 774 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 DUX4Q9UBX2 424 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 KAT6AQ92794 2004 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 MGAMO43451 1857 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 ANKRD20A5PA0PJZ0 165 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 SEC14L6B5MCN3 397 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 SH3BGRLO75368 114 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 OR4A8P0C604 315 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 MAGEA3P43357 314 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 PPOXP50336 477 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 PPP3R1P63098 170 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 PDGFRLQ15198 375 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 SIGLEC15Q6ZMC9 328 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 FAM220AQ7Z4H9 259 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 ZCCHC9Q8N567 271 aaKnown RBP4.38□□□□□ -1.71
NPHP3-206ENST00000474871 C11orf42Q8N5U0 333 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 ZNF555Q8NEP9 628 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 C1orf54Q8WWF1 131 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 SORCS1Q8WY21 1168 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 SRSF8Q9BRL6 282 aaKnown RBP4.38□□□□□ -1.71
NPHP3-206ENST00000474871 SELENOIQ9C0D9 397 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 SLC32A1Q9H598 525 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms