RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 ZMYND11Q15326 602 aa8.08□□□□□ -1.12
MCF2L-223ENST00000473345 DUSP7Q16829 419 aa8.08□□□□□ -1.12
MCF2L-223ENST00000473345 HFEQ30201 348 aa8.08□□□□□ -1.12
MCF2L-223ENST00000473345 LRIF1Q5T3J3 769 aa8.08□□□□□ -1.12
MCF2L-223ENST00000473345 NXNQ6DKJ4 435 aa8.08□□□□□ -1.12
MCF2L-223ENST00000473345 PTOV1Q86YD1 416 aa8.08□□□□□ -1.12
MCF2L-223ENST00000473345 C10orf53Q8N6V4 93 aa8.08□□□□□ -1.12
MCF2L-223ENST00000473345 KIR3DL3Q8N743 410 aa8.08□□□□□ -1.12
MCF2L-223ENST00000473345 SYT14Q8NB59 555 aa8.08□□□□□ -1.12
MCF2L-223ENST00000473345 OR6T1Q8NGN1 323 aa8.08□□□□□ -1.12
MCF2L-223ENST00000473345 KLF14Q8TD94 323 aaPredicted RBP8.08□□□□□ -1.12
MCF2L-223ENST00000473345 TSPEARQ8WU66 669 aa8.08□□□□□ -1.12
MCF2L-223ENST00000473345 C11orf40Q8WZ69 217 aa8.08□□□□□ -1.12
MCF2L-223ENST00000473345 RAB1CQ92928 201 aa8.08□□□□□ -1.12
MCF2L-223ENST00000473345 POP5Q969H6 163 aaKnown RBP8.08□□□□□ -1.12
MCF2L-223ENST00000473345 SLC7A6OSQ96CW6 309 aaPredicted RBP8.08□□□□□ -1.12
MCF2L-223ENST00000473345 SLC25A44Q96H78 314 aaPredicted RBP8.08□□□□□ -1.12
MCF2L-223ENST00000473345 NSL1Q96IY1 281 aa8.08□□□□□ -1.12
MCF2L-223ENST00000473345 ITCHQ96J02 903 aa8.08□□□□□ -1.12
MCF2L-223ENST00000473345 ZBTB18Q99592 522 aa8.08□□□□□ -1.12
MCF2L-223ENST00000473345 ARHGDIGQ99819 225 aa8.08□□□□□ -1.12
MCF2L-223ENST00000473345 ZNF426Q9BUY5 554 aa8.08□□□□□ -1.12
MCF2L-223ENST00000473345 WNT5BQ9H1J7 359 aa8.08□□□□□ -1.12
MCF2L-223ENST00000473345 DECR2Q9NUI1 292 aa8.08□□□□□ -1.12
MCF2L-223ENST00000473345 SLCO1C1Q9NYB5 712 aa8.08□□□□□ -1.12
MCF2L-223ENST00000473345 ZIM2Q9NZV7 527 aa8.08□□□□□ -1.12
MCF2L-223ENST00000473345 TESQ9UGI8 421 aaKnown RBP8.08□□□□□ -1.12
MCF2L-223ENST00000473345 CPSF4LA6NMK7 179 aaKnown RBP8.07□□□□□ -1.12
MCF2L-223ENST00000473345 CLDN34H7C241 214 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 TRMUO75648 421 aaKnown RBP8.07□□□□□ -1.12
MCF2L-223ENST00000473345 ZNF205O95201 554 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 ANP32DO95626 131 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 PLATP00750 562 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 IGHMP01871 453 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 F13BP05160 661 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 ADH4P08319 380 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 SBK2P0C263 348 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 FUT1P19526 365 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 CCNOP22674 350 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 CALB2P22676 271 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 GATA3P23771 443 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 ZNF133P52736 654 aaPredicted RBP8.07□□□□□ -1.12
MCF2L-223ENST00000473345 PCBP3P57721 371 aaKnown RBP8.07□□□□□ -1.12
MCF2L-223ENST00000473345 NCALDP61601 193 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 IL13RA1P78552 427 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 CDK6Q00534 326 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 PSG4Q00888 419 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 FADDQ13158 208 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 ARMCX4Q5H9R4 360 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 FAM209AQ5JX71 171 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 GCNT6Q5T4J0 391 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 MBNL2Q5VZF2 373 aaKnown RBP8.07□□□□□ -1.12
MCF2L-223ENST00000473345 OTPQ5XKR4 325 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 HIST2H2BDQ6DRA6 164 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 ZNF774Q6NX45 483 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 MSANTD1Q6ZTZ1 278 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 ASRGL1Q7L266 308 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 SLC16A14Q7RTX9 510 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 C1QL4Q86Z23 238 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 RBM15BQ8NDT2 890 aaKnown RBP8.07□□□□□ -1.12
MCF2L-223ENST00000473345 MOSPD2Q8NHP6 518 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 RP9Q8TA86 221 aaKnown RBP8.07□□□□□ -1.12
MCF2L-223ENST00000473345 SNX33Q8WV41 574 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 ASB10Q8WXI3 467 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 HDAC2Q92769 488 aaKnown RBP8.07□□□□□ -1.12
MCF2L-223ENST00000473345 ZNF566Q969W8 418 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 TMIGD2Q96BF3 282 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 ELMOD3Q96FG2 381 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 MCHR1Q99705 422 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 BCL2L14Q9BZR8 327 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 SLITRK2Q9H156 845 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 C1orf21Q9H246 121 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 RNF121Q9H920 327 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 CACYBPQ9HB71 228 aaKnown RBP8.07□□□□□ -1.12
MCF2L-223ENST00000473345 PATZ1Q9HBE1 687 aaKnown RBP8.07□□□□□ -1.12
MCF2L-223ENST00000473345 TAGLN3Q9UI15 199 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 NPTNQ9Y639 398 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 AUP1Q9Y679 476 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 CAPN7Q9Y6W3 813 aa8.07□□□□□ -1.12
MCF2L-223ENST00000473345 TMEM247A6NEH6 219 aa8.06□□□□□ -1.12
MCF2L-223ENST00000473345 A8MXK9 166 aa8.06□□□□□ -1.12
MCF2L-223ENST00000473345 HOXA3O43365 443 aaPredicted RBP8.06□□□□□ -1.12
MCF2L-223ENST00000473345 RNF13O43567 381 aa8.06□□□□□ -1.12
MCF2L-223ENST00000473345 FOXH1O75593 365 aa8.06□□□□□ -1.12
MCF2L-223ENST00000473345 MT-ATP6P00846 226 aa8.06□□□□□ -1.12
MCF2L-223ENST00000473345 CD55P08174 381 aa8.06□□□□□ -1.12
MCF2L-223ENST00000473345 COX4I1P13073 169 aa8.06□□□□□ -1.12
MCF2L-223ENST00000473345 CD247P20963 164 aa8.06□□□□□ -1.12
MCF2L-223ENST00000473345 STOMP27105 288 aa8.06□□□□□ -1.12
MCF2L-223ENST00000473345 UGT2B15P54855 530 aa8.06□□□□□ -1.12
MCF2L-223ENST00000473345 ERVK-25P63136 954 aa8.06□□□□□ -1.12
MCF2L-223ENST00000473345 TEKQ02763 1124 aa8.06□□□□□ -1.12
MCF2L-223ENST00000473345 RPL18Q07020 188 aaKnown RBP8.06□□□□□ -1.12
MCF2L-223ENST00000473345 PSG7Q13046 419 aa8.06□□□□□ -1.12
MCF2L-223ENST00000473345 SCARB2Q14108 478 aa8.06□□□□□ -1.12
MCF2L-223ENST00000473345 OCLNQ16625 522 aa8.06□□□□□ -1.12
MCF2L-223ENST00000473345 TBC1D28Q2M2D7 210 aa8.06□□□□□ -1.12
MCF2L-223ENST00000473345 DEFB112Q30KQ8 113 aa8.06□□□□□ -1.12
MCF2L-223ENST00000473345 MMEL1Q495T6 779 aa8.06□□□□□ -1.12
MCF2L-223ENST00000473345 ENTPD8Q5MY95 495 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms