RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 CCDC168Q8NDH2 2452 aa17.13■□□□□ 0.33
HDAC7-220ENST00000471235 IGLV1-36A0A0B4J1U3 117 aa17.13■□□□□ 0.33
HDAC7-220ENST00000471235 OR6C68A6NDL8 312 aa17.13■□□□□ 0.33
HDAC7-220ENST00000471235 H3BN98 237 aa17.13■□□□□ 0.33
HDAC7-220ENST00000471235 H3BNX3 289 aa17.13■□□□□ 0.33
HDAC7-220ENST00000471235 DCTN6O00399 190 aa17.13■□□□□ 0.33
HDAC7-220ENST00000471235 CST2P09228 141 aa17.13■□□□□ 0.33
HDAC7-220ENST00000471235 LAP3P28838 519 aa17.13■□□□□ 0.33
HDAC7-220ENST00000471235 GABPB1Q06547 395 aaPredicted RBP17.13■□□□□ 0.33
HDAC7-220ENST00000471235 DBPQ10586 325 aaPredicted RBP17.13■□□□□ 0.33
HDAC7-220ENST00000471235 ENDOGQ14249 297 aaKnown RBP17.13■□□□□ 0.33
HDAC7-220ENST00000471235 PGGHGQ32M88 737 aa17.13■□□□□ 0.33
HDAC7-220ENST00000471235 DNM1P34Q6PK57 102 aa17.13■□□□□ 0.33
HDAC7-220ENST00000471235 IQCF1Q8N6M8 205 aa17.13■□□□□ 0.33
HDAC7-220ENST00000471235 NPEPL1Q8NDH3 523 aa17.13■□□□□ 0.33
HDAC7-220ENST00000471235 OR2T33Q8NG76 320 aa17.13■□□□□ 0.33
HDAC7-220ENST00000471235 MBD6Q96DN6 1003 aa17.13■□□□□ 0.33
HDAC7-220ENST00000471235 FBXO17Q96EF6 278 aa17.13■□□□□ 0.33
HDAC7-220ENST00000471235 BDH2Q9BUT1 245 aa17.13■□□□□ 0.33
HDAC7-220ENST00000471235 GABARAPL1Q9H0R8 117 aa17.13■□□□□ 0.33
HDAC7-220ENST00000471235 EMC7Q9NPA0 242 aa17.13■□□□□ 0.33
HDAC7-220ENST00000471235 CCNB1IP1Q9NPC3 277 aa17.13■□□□□ 0.33
HDAC7-220ENST00000471235 RPRD1BQ9NQG5 326 aaKnown RBP17.13■□□□□ 0.33
HDAC7-220ENST00000471235 COA3Q9Y2R0 106 aaPredicted RBP17.13■□□□□ 0.33
HDAC7-220ENST00000471235 CHD3Q12873 2000 aaKnown RBP17.13■□□□□ 0.33
HDAC7-220ENST00000471235 SOD3P08294 240 aa17.12■□□□□ 0.33
HDAC7-220ENST00000471235 DANCRP0C864 163 aa17.12■□□□□ 0.33
HDAC7-220ENST00000471235 OSMP13725 252 aa17.12■□□□□ 0.33
HDAC7-220ENST00000471235 ZNF23P17027 643 aa17.12■□□□□ 0.33
HDAC7-220ENST00000471235 ZNF32P17041 273 aa17.12■□□□□ 0.33
HDAC7-220ENST00000471235 CRABP1P29762 137 aa17.12■□□□□ 0.33
HDAC7-220ENST00000471235 ZFP1Q6P2D0 407 aa17.12■□□□□ 0.33
HDAC7-220ENST00000471235 UGT2A3Q6UWM9 527 aa17.12■□□□□ 0.33
HDAC7-220ENST00000471235 HIPK1Q86Z02 1210 aa17.12■□□□□ 0.33
HDAC7-220ENST00000471235 GLB1L2Q8IW92 636 aa17.12■□□□□ 0.33
HDAC7-220ENST00000471235 SLC37A3Q8NCC5 494 aa17.12■□□□□ 0.33
HDAC7-220ENST00000471235 SMAP2Q8WU79 429 aaPredicted RBP17.12■□□□□ 0.33
HDAC7-220ENST00000471235 DNAJC9Q8WXX5 260 aa17.12■□□□□ 0.33
HDAC7-220ENST00000471235 DHRS9Q9BPW9 319 aa17.12■□□□□ 0.33
HDAC7-220ENST00000471235 ZNF416Q9BWM5 594 aa17.12■□□□□ 0.33
HDAC7-220ENST00000471235 RACGAP1Q9H0H5 632 aa17.12■□□□□ 0.33
HDAC7-220ENST00000471235 KCNN2Q9H2S1 579 aa17.12■□□□□ 0.33
HDAC7-220ENST00000471235 ITGB1BP2Q9UKP3 347 aa17.12■□□□□ 0.33
HDAC7-220ENST00000471235 B9D1Q9UPM9 204 aa17.12■□□□□ 0.33
HDAC7-220ENST00000471235 AKAP9Q99996 3911 aa17.12■□□□□ 0.33
HDAC7-220ENST00000471235 ARID1AO14497 2285 aa17.11■□□□□ 0.33
HDAC7-220ENST00000471235 GPANK1O95872 356 aa17.11■□□□□ 0.33
HDAC7-220ENST00000471235 SERPINA5P05154 406 aa17.11■□□□□ 0.33
HDAC7-220ENST00000471235 GAAP10253 952 aa17.11■□□□□ 0.33
HDAC7-220ENST00000471235 GRK5P34947 590 aa17.11■□□□□ 0.33
HDAC7-220ENST00000471235 GUCA1AP43080 201 aaPredicted RBP17.11■□□□□ 0.33
HDAC7-220ENST00000471235 DAPP51397 102 aa17.11■□□□□ 0.33
HDAC7-220ENST00000471235 HGFACQ04756 655 aa17.11■□□□□ 0.33
HDAC7-220ENST00000471235 DEFB113Q30KQ7 82 aa17.11■□□□□ 0.33
HDAC7-220ENST00000471235 PABPC1L2AQ5JQF8 200 aa17.11■□□□□ 0.33
HDAC7-220ENST00000471235 ZNF362Q5T0B9 420 aaPredicted RBP17.11■□□□□ 0.33
HDAC7-220ENST00000471235 OTPQ5XKR4 325 aa17.11■□□□□ 0.33
HDAC7-220ENST00000471235 OR6V1Q8N148 313 aa17.11■□□□□ 0.33
HDAC7-220ENST00000471235 CYB561A3Q8NBI2 242 aa17.11■□□□□ 0.33
HDAC7-220ENST00000471235 IL17RDQ8NFM7 739 aa17.11■□□□□ 0.33
HDAC7-220ENST00000471235 CENPNQ96H22 339 aaPredicted RBP17.11■□□□□ 0.33
HDAC7-220ENST00000471235 DDOQ99489 341 aa17.11■□□□□ 0.33
HDAC7-220ENST00000471235 SEMA6AQ9H2E6 1030 aa17.11■□□□□ 0.33
HDAC7-220ENST00000471235 KLHL21Q9UJP4 597 aa17.11■□□□□ 0.33
HDAC7-220ENST00000471235 FKBP7Q9Y680 259 aa17.11■□□□□ 0.33
HDAC7-220ENST00000471235 G3V2T6 193 aa17.1■□□□□ 0.33
HDAC7-220ENST00000471235 MPZL1O95297 269 aa17.1■□□□□ 0.33
HDAC7-220ENST00000471235 ZNF35P13682 527 aa17.1■□□□□ 0.33
HDAC7-220ENST00000471235 POU1F1P28069 291 aa17.1■□□□□ 0.33
HDAC7-220ENST00000471235 HSF2Q03933 536 aa17.1■□□□□ 0.33
HDAC7-220ENST00000471235 CRMP1Q14194 572 aa17.1■□□□□ 0.33
HDAC7-220ENST00000471235 DTX2Q86UW9 622 aa17.1■□□□□ 0.33
HDAC7-220ENST00000471235 ZBTB46Q86UZ6 589 aa17.1■□□□□ 0.33
HDAC7-220ENST00000471235 SVOPLQ8N434 492 aa17.1■□□□□ 0.33
HDAC7-220ENST00000471235 SLC30A7Q8NEW0 376 aa17.1■□□□□ 0.33
HDAC7-220ENST00000471235 AKR7LQ8NHP1 331 aa17.1■□□□□ 0.33
HDAC7-220ENST00000471235 TMEM171Q8WVE6 324 aa17.1■□□□□ 0.33
HDAC7-220ENST00000471235 C11orf40Q8WZ69 217 aa17.1■□□□□ 0.33
HDAC7-220ENST00000471235 PIGTQ969N2 578 aa17.1■□□□□ 0.33
HDAC7-220ENST00000471235 PKP2Q99959 881 aa17.1■□□□□ 0.33
HDAC7-220ENST00000471235 SRA1Q9HD15 236 aaKnown RBP17.1■□□□□ 0.33
HDAC7-220ENST00000471235 PAPOLBQ9NRJ5 636 aaKnown RBP17.1■□□□□ 0.33
HDAC7-220ENST00000471235 BEX4Q9NWD9 120 aaPredicted RBP17.1■□□□□ 0.33
HDAC7-220ENST00000471235 LAMP3Q9UQV4 416 aa17.1■□□□□ 0.33
HDAC7-220ENST00000471235 USF3Q68DE3 2245 aa17.09■□□□□ 0.33
HDAC7-220ENST00000471235 CREBBPQ92793 2442 aa17.09■□□□□ 0.33
HDAC7-220ENST00000471235 C12orf71A8MTZ7 269 aa17.09■□□□□ 0.33
HDAC7-220ENST00000471235 CENPAP49450 140 aa17.09■□□□□ 0.33
HDAC7-220ENST00000471235 FABP6P51161 128 aa17.09■□□□□ 0.33
HDAC7-220ENST00000471235 ART1P52961 327 aa17.09■□□□□ 0.33
HDAC7-220ENST00000471235 PSG4Q00888 419 aa17.09■□□□□ 0.33
HDAC7-220ENST00000471235 KCNMB1Q16558 191 aa17.09■□□□□ 0.33
HDAC7-220ENST00000471235 ZNF544Q6NX49 715 aa17.09■□□□□ 0.33
HDAC7-220ENST00000471235 SLC27A4Q6P1M0 643 aa17.09■□□□□ 0.33
HDAC7-220ENST00000471235 ZDHHC13Q8IUH4 622 aa17.09■□□□□ 0.33
HDAC7-220ENST00000471235 PARP8Q8N3A8 854 aa17.09■□□□□ 0.33
HDAC7-220ENST00000471235 NUP37Q8NFH4 326 aa17.09■□□□□ 0.33
HDAC7-220ENST00000471235 OR4F15Q8NGB8 312 aa17.09■□□□□ 0.33
HDAC7-220ENST00000471235 FOXC2Q99958 501 aa17.09■□□□□ 0.33
HDAC7-220ENST00000471235 TRAF4Q9BUZ4 470 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms