RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 ZNF177Q13360 481 aaPredicted RBP3.84□□□□□ -1.79
VPS50-210ENST00000471188 EIF4EBP2Q13542 120 aaPredicted RBP3.84□□□□□ -1.79
VPS50-210ENST00000471188 COL9A2Q14055 689 aaPredicted RBP3.84□□□□□ -1.79
VPS50-210ENST00000471188 CRMP1Q14194 572 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 TOMM34Q15785 309 aaPredicted RBP3.84□□□□□ -1.79
VPS50-210ENST00000471188 DUSP5Q16690 384 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 ISXQ2M1V0 245 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 MIDNQ504T8 468 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 SOHLH1Q5JUK2 328 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 ATPAF1Q5TC12 328 aaPredicted RBP3.84□□□□□ -1.79
VPS50-210ENST00000471188 RPL7L1Q6DKI1 246 aaKnown RBP3.84□□□□□ -1.79
VPS50-210ENST00000471188 HEPN1Q6WQI6 88 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 ZNF574Q6ZN55 896 aaPredicted RBP3.84□□□□□ -1.79
VPS50-210ENST00000471188 MBOAT2Q6ZWT7 520 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 VRK2Q86Y07 508 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 C2orf73Q8N5S3 287 aaPredicted RBP3.84□□□□□ -1.79
VPS50-210ENST00000471188 TEX19Q8NA77 164 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 TMEM104Q8NE00 496 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 OR13C9Q8NGT0 318 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 OR6K6Q8NGW6 343 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 HPSE2Q8WWQ2 592 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 FBXO32Q969P5 355 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 NEURL3Q96EH8 262 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 MVB12AQ96EY5 273 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 LMF1Q96S06 567 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 CCNL2Q96S94 520 aaPredicted RBP3.84□□□□□ -1.79
VPS50-210ENST00000471188 MCHR1Q99705 422 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 SLC6A7Q99884 636 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 SLC25A21Q9BQT8 299 aaPredicted RBP3.84□□□□□ -1.79
VPS50-210ENST00000471188 R3HDMLQ9H3Y0 253 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 EPHX3Q9H6B9 360 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 SAGE1Q9NXZ1 904 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 IL36AQ9UHA7 158 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 TRPV2Q9Y5S1 764 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 SLCO1B1Q9Y6L6 691 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 CEP350Q5VT06 3117 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 TEX13DA0A0J9YY54 714 aaPredicted RBP3.84□□□□□ -1.79
VPS50-210ENST00000471188 A0A1B0GVT2 93 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 ZNF736B4DX44 427 aaPredicted RBP3.84□□□□□ -1.79
VPS50-210ENST00000471188 MAN2B1O00754 1011 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 GEMIN2O14893 280 aaKnown RBP3.84□□□□□ -1.79
VPS50-210ENST00000471188 GMFGO60234 142 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 ALOX12BO75342 701 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 ERAL1O75616 437 aaKnown RBP3.84□□□□□ -1.79
VPS50-210ENST00000471188 ADAP1O75689 374 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 APBB3O95704 486 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 SLC16A8O95907 504 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 FCGR3AP08637 254 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 IGFALSP35858 605 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 TAS2R19P59542 299 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 ZNF280AP59817 542 aaPredicted RBP3.84□□□□□ -1.79
VPS50-210ENST00000471188 CD81P60033 236 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 ACTBP60709 375 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 RPS23P62266 143 aaKnown RBP3.84□□□□□ -1.79
VPS50-210ENST00000471188 RAB1AP62820 205 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 ACTG1P63261 375 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 ACTC1P68032 377 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 ACTA1P68133 377 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 PPP1R1AQ13522 171 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 TNFAIP1Q13829 316 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 NR0B2Q15466 257 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 CCSMST1Q4G0I0 132 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 NCR3LG1Q68D85 454 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 FAM71E1Q6IPT2 247 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 DRAM2Q6UX65 266 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 TMPPEQ6ZT21 453 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 DEFB132Q7Z7B7 95 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 MRGPREQ86SM8 312 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 KLHDC9Q8NEP7 349 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 SLC25A43Q8WUT9 341 aaPredicted RBP3.84□□□□□ -1.79
VPS50-210ENST00000471188 LCN9Q8WX39 176 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 OR5P2Q8WZ92 322 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 NKD1Q969G9 470 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 R3HDM4Q96D70 268 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 MALSU1Q96EH3 234 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 RRNAD1Q96FB5 475 aaKnown RBP3.84□□□□□ -1.79
VPS50-210ENST00000471188 ZNF426Q9BUY5 554 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 MAGEH1Q9H213 219 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 KCNK15Q9H427 330 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 PDFQ9HBH1 243 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 INPP5EQ9NRR6 644 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 PRODH2Q9UF12 536 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 ST6GALNAC2Q9UJ37 374 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 KCNE5Q9UJ90 142 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 ADAMTS5Q9UNA0 930 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 GTF2A1LQ9UNN4 478 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 DOCK4Q8N1I0 1966 aa3.84□□□□□ -1.8
VPS50-210ENST00000471188 ZSWIM8A7E2V4 1837 aa3.84□□□□□ -1.8
VPS50-210ENST00000471188 TBC1D3DA0A087WVF3 549 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 ELOA3CA0A087WX78 387 aaPredicted RBP3.83□□□□□ -1.8
VPS50-210ENST00000471188 TBC1D3IA0A087WXS9 549 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 TBC1D3EA0A087X179 549 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 TBC1D3KA0A087X1G2 549 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 SLC5A10A0PJK1 596 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 TSPAN11A1L157 253 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 TBC1D3FA6NER0 549 aaPredicted RBP3.83□□□□□ -1.8
VPS50-210ENST00000471188 CBY3A6NI87 242 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 TBC1D3LB9A6J9 549 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 MKRN2OSH3BPM6 223 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 EIF1AYO14602 144 aaKnown RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms