RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 RNH1P13489 461 aaKnown RBP3.3□□□□□ -1.88
COL9A1-206ENST00000470652 SFTPDP35247 375 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 SOAT1P35610 550 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 XKP51811 444 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 NCBP2P52298 156 aaKnown RBP eCLIP3.3□□□□□ -1.88
COL9A1-206ENST00000470652 POLR2JP52435 117 aaKnown RBP3.3□□□□□ -1.88
COL9A1-206ENST00000470652 EMP2P54851 167 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 CLDN8P56748 225 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 MTPNP58546 118 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 RELAQ04206 551 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 FUT5Q11128 374 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 FAM53BQ14153 422 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 RCAN2Q14206 197 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 NSDHLQ15738 373 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 MAPK11Q15759 364 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 CLPPQ16740 277 aaPredicted RBP3.3□□□□□ -1.88
COL9A1-206ENST00000470652 NDUFA9Q16795 377 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 NDUFAF6Q330K2 333 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 LACTB2Q53H82 288 aaPredicted RBP3.3□□□□□ -1.88
COL9A1-206ENST00000470652 SFT2D3Q587I9 215 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.3□□□□□ -1.88
COL9A1-206ENST00000470652 CPTPQ5TA50 214 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 FHL5Q5TD97 284 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 SLC30A6Q6NXT4 461 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 SLC48A1Q6P1K1 146 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 C16orf54Q6UWD8 224 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 C6orf89Q6UWU4 347 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 DLEU7Q6UYE1 221 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 NPSR1Q6W5P4 371 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 RNF165Q6ZSG1 346 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 SPATA19Q7Z5L4 167 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 COMTD1Q86VU5 262 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 CDC20BQ86Y33 519 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 C9orf40Q8IXQ3 194 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 TBC1D19Q8N5T2 526 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 NFAM1Q8NET5 270 aaPredicted RBP3.3□□□□□ -1.88
COL9A1-206ENST00000470652 TTLQ8NG68 377 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 OR52R1Q8NGF1 315 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 OR4A15Q8NGL6 344 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 C11orf45Q8TAV5 145 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 STARD8Q92502 1023 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 MAL2Q969L2 176 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 NCLNQ969V3 563 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 AMDHD1Q96NU7 426 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 OR52E6Q96RD3 313 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 HES7Q9BYE0 225 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 KRTAP4-3Q9BYR4 195 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 NLNQ9BYT8 704 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 OR8D2Q9GZM6 311 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 FN3KQ9H479 309 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 RNF121Q9H920 327 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 GPN1Q9HCN4 374 aaPredicted RBP3.3□□□□□ -1.88
COL9A1-206ENST00000470652 LYRM4Q9HD34 91 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 ADAP2Q9NPF8 381 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 MIEF1Q9NQG6 463 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 MAT2BQ9NZL9 334 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 ZNF282Q9UDV7 671 aaPredicted RBP3.3□□□□□ -1.88
COL9A1-206ENST00000470652 ATP6V1HQ9UI12 483 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 FBXL4Q9UKA2 621 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.3□□□□□ -1.88
COL9A1-206ENST00000470652 EIF3LQ9Y262 564 aaKnown RBP3.3□□□□□ -1.88
COL9A1-206ENST00000470652 MPDZO75970 2070 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 KIAA1549Q9HCM3 1950 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 USP24Q9UPU5 2620 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 TPRP12270 2363 aaKnown RBP3.3□□□□□ -1.88
COL9A1-206ENST00000470652 PIEZO2Q9H5I5 2752 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 IGLV3-12A0A075B6K2 115 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 IGHV1-45A0A0A0MS14 117 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 TRBV11-1A0A0K0K1C0 115 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 RNF103-CHMP3A0A140T963 221 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 CLDN24A6NM45 220 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 A8MUI8 341 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 A8MXE2 369 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 A8MXK9 166 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 CCL24O00175 119 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 WWP2O00308 870 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 UPK1AO00322 258 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 NME4O00746 187 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 MRASO14807 208 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 NVLO15381 856 aaKnown RBP3.29□□□□□ -1.88
COL9A1-206ENST00000470652 CFLARO15519 480 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 GMFGO60234 142 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 CYTIPO60759 359 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 CTNSO60931 367 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 GPR75O95800 540 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 ALPPP05187 535 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 PRPS2P11908 318 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 IDO1P14902 403 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 NCK1P16333 377 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 TNNI3P19429 210 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 PTNP21246 168 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 PTPN4P29074 926 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 AQP1P29972 269 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 SERPINB1P30740 379 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 S100A3P33764 101 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 HPCAL1P37235 193 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 CAPGP40121 348 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 RFX3P48380 749 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 NUDT2P50583 147 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 CRYBA2P53672 197 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms