RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 SLC22A3O75751 556 aa15.9■□□□□ 0.14
NCKIPSD-209ENST00000470006 CH25HO95992 272 aa15.9■□□□□ 0.14
NCKIPSD-209ENST00000470006 UMPSP11172 480 aa15.9■□□□□ 0.14
NCKIPSD-209ENST00000470006 RPS2P15880 293 aaKnown RBP15.9■□□□□ 0.14
NCKIPSD-209ENST00000470006 ARHGDIAP52565 204 aa15.9■□□□□ 0.14
NCKIPSD-209ENST00000470006 NRN1LQ496H8 165 aa15.9■□□□□ 0.14
NCKIPSD-209ENST00000470006 TTMPQ5BVD1 217 aa15.9■□□□□ 0.14
NCKIPSD-209ENST00000470006 NXNQ6DKJ4 435 aa15.9■□□□□ 0.14
NCKIPSD-209ENST00000470006 ZER1Q7Z7L7 766 aa15.9■□□□□ 0.14
NCKIPSD-209ENST00000470006 RANBP3LQ86VV4 465 aaPredicted RBP15.9■□□□□ 0.14
NCKIPSD-209ENST00000470006 C1orf174Q8IYL3 243 aa15.9■□□□□ 0.14
NCKIPSD-209ENST00000470006 NFKBIDQ8NI38 313 aa15.9■□□□□ 0.14
NCKIPSD-209ENST00000470006 RAB40AQ8WXH6 277 aa15.9■□□□□ 0.14
NCKIPSD-209ENST00000470006 POM121L2Q96KW2 1035 aa15.9■□□□□ 0.14
NCKIPSD-209ENST00000470006 SAMD8Q96LT4 415 aa15.9■□□□□ 0.14
NCKIPSD-209ENST00000470006 SORT1Q99523 831 aa15.9■□□□□ 0.14
NCKIPSD-209ENST00000470006 NANSQ9NR45 359 aa15.9■□□□□ 0.14
NCKIPSD-209ENST00000470006 TAS2R5Q9NYW4 299 aa15.9■□□□□ 0.14
NCKIPSD-209ENST00000470006 ASH2LQ9UBL3 628 aa15.9■□□□□ 0.14
NCKIPSD-209ENST00000470006 KLHL21Q9UJP4 597 aa15.9■□□□□ 0.14
NCKIPSD-209ENST00000470006 LOC100509620A0A075B734 347 aa15.89■□□□□ 0.13
NCKIPSD-209ENST00000470006 IGHV2-70DA0A0C4DH43 119 aa15.89■□□□□ 0.13
NCKIPSD-209ENST00000470006 MCIDASD6RGH6 385 aa15.89■□□□□ 0.13
NCKIPSD-209ENST00000470006 WNT2P09544 360 aa15.89■□□□□ 0.13
NCKIPSD-209ENST00000470006 ZNF32P17041 273 aa15.89■□□□□ 0.13
NCKIPSD-209ENST00000470006 ETV4P43268 484 aa15.89■□□□□ 0.13
NCKIPSD-209ENST00000470006 CDK5R2Q13319 367 aa15.89■□□□□ 0.13
NCKIPSD-209ENST00000470006 TAF11Q15544 211 aa15.89■□□□□ 0.13
NCKIPSD-209ENST00000470006 SGCAQ16586 387 aa15.89■□□□□ 0.13
NCKIPSD-209ENST00000470006 GPR157Q5UAW9 335 aa15.89■□□□□ 0.13
NCKIPSD-209ENST00000470006 DHRS4L2Q6PKH6 230 aa15.89■□□□□ 0.13
NCKIPSD-209ENST00000470006 ZNF620Q6ZNG0 422 aa15.89■□□□□ 0.13
NCKIPSD-209ENST00000470006 RFPL4BQ6ZWI9 263 aa15.89■□□□□ 0.13
NCKIPSD-209ENST00000470006 POU5F2Q8N7G0 328 aa15.89■□□□□ 0.13
NCKIPSD-209ENST00000470006 PLEKHA8Q96JA3 519 aa15.89■□□□□ 0.13
NCKIPSD-209ENST00000470006 SIAEQ9HAT2 523 aa15.89■□□□□ 0.13
NCKIPSD-209ENST00000470006 NOX4Q9NPH5 578 aa15.89■□□□□ 0.13
NCKIPSD-209ENST00000470006 CLIC1O00299 241 aa15.88■□□□□ 0.13
NCKIPSD-209ENST00000470006 SDHDO14521 159 aa15.88■□□□□ 0.13
NCKIPSD-209ENST00000470006 PIN1P1O15428 100 aa15.88■□□□□ 0.13
NCKIPSD-209ENST00000470006 ZNF205O95201 554 aa15.88■□□□□ 0.13
NCKIPSD-209ENST00000470006 EPHA3P29320 983 aa15.88■□□□□ 0.13
NCKIPSD-209ENST00000470006 CDAP32320 146 aa15.88■□□□□ 0.13
NCKIPSD-209ENST00000470006 Q6YL49 198 aa15.88■□□□□ 0.13
NCKIPSD-209ENST00000470006 ITLN1Q8WWA0 313 aa15.88■□□□□ 0.13
NCKIPSD-209ENST00000470006 RSPO3Q9BXY4 272 aaPredicted RBP15.88■□□□□ 0.13
NCKIPSD-209ENST00000470006 WDR55Q9H6Y2 383 aaPredicted RBP15.88■□□□□ 0.13
NCKIPSD-209ENST00000470006 ELOVL3Q9HB03 270 aa15.88■□□□□ 0.13
NCKIPSD-209ENST00000470006 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.88■□□□□ 0.13
NCKIPSD-209ENST00000470006 LGALS13Q9UHV8 139 aa15.88■□□□□ 0.13
NCKIPSD-209ENST00000470006 C3orf80F5H4A9 247 aa15.87■□□□□ 0.13
NCKIPSD-209ENST00000470006 BLOC1S5-TXNDC5H3BN57 136 aa15.87■□□□□ 0.13
NCKIPSD-209ENST00000470006 KPNA4O00629 521 aaPredicted RBP15.87■□□□□ 0.13
NCKIPSD-209ENST00000470006 SURF4O15260 269 aa15.87■□□□□ 0.13
NCKIPSD-209ENST00000470006 TYROBPO43914 113 aa15.87■□□□□ 0.13
NCKIPSD-209ENST00000470006 MGRN1O60291 552 aa15.87■□□□□ 0.13
NCKIPSD-209ENST00000470006 BGNP21810 368 aa15.87■□□□□ 0.13
NCKIPSD-209ENST00000470006 ERVK-25P63136 954 aa15.87■□□□□ 0.13
NCKIPSD-209ENST00000470006 FADDQ13158 208 aa15.87■□□□□ 0.13
NCKIPSD-209ENST00000470006 STX3Q13277 289 aa15.87■□□□□ 0.13
NCKIPSD-209ENST00000470006 ZNF74Q16587 644 aa15.87■□□□□ 0.13
NCKIPSD-209ENST00000470006 SWT1Q5T5J6 900 aaKnown RBP15.87■□□□□ 0.13
NCKIPSD-209ENST00000470006 HHATQ5VTY9 493 aa15.87■□□□□ 0.13
NCKIPSD-209ENST00000470006 REEP3Q6NUK4 255 aa15.87■□□□□ 0.13
NCKIPSD-209ENST00000470006 ALDH16A1Q8IZ83 802 aa15.87■□□□□ 0.13
NCKIPSD-209ENST00000470006 NOXO1Q8NFA2 376 aa15.87■□□□□ 0.13
NCKIPSD-209ENST00000470006 FAM71F1Q96KD3 344 aaPredicted RBP15.87■□□□□ 0.13
NCKIPSD-209ENST00000470006 A0A1W2PRG6 482 aa15.86■□□□□ 0.13
NCKIPSD-209ENST00000470006 PRORSD1PA6NEY8 169 aa15.86■□□□□ 0.13
NCKIPSD-209ENST00000470006 H3BSA7 217 aa15.86■□□□□ 0.13
NCKIPSD-209ENST00000470006 BIRC5O15392 142 aa15.86■□□□□ 0.13
NCKIPSD-209ENST00000470006 TPST2O60704 377 aa15.86■□□□□ 0.13
NCKIPSD-209ENST00000470006 PRB2P02812 416 aaPredicted RBP15.86■□□□□ 0.13
NCKIPSD-209ENST00000470006 MELTFP08582 738 aa15.86■□□□□ 0.13
NCKIPSD-209ENST00000470006 IDO1P14902 403 aa15.86■□□□□ 0.13
NCKIPSD-209ENST00000470006 PSG4Q00888 419 aa15.86■□□□□ 0.13
NCKIPSD-209ENST00000470006 PAX2Q02962 417 aa15.86■□□□□ 0.13
NCKIPSD-209ENST00000470006 PSG7Q13046 419 aa15.86■□□□□ 0.13
NCKIPSD-209ENST00000470006 C2orf68Q2NKX9 166 aa15.86■□□□□ 0.13
NCKIPSD-209ENST00000470006 RUNDC3AQ59EK9 446 aa15.86■□□□□ 0.13
NCKIPSD-209ENST00000470006 GCNT6Q5T4J0 391 aa15.86■□□□□ 0.13
NCKIPSD-209ENST00000470006 RUSC1-AS1Q66K80 236 aa15.86■□□□□ 0.13
NCKIPSD-209ENST00000470006 SLC27A4Q6P1M0 643 aa15.86■□□□□ 0.13
NCKIPSD-209ENST00000470006 TTC33Q6PID6 262 aaPredicted RBP15.86■□□□□ 0.13
NCKIPSD-209ENST00000470006 ARL9Q6T311 187 aa15.86■□□□□ 0.13
NCKIPSD-209ENST00000470006 NANOGNBQ7Z5D8 188 aa15.86■□□□□ 0.13
NCKIPSD-209ENST00000470006 KLBQ86Z14 1044 aa15.86■□□□□ 0.13
NCKIPSD-209ENST00000470006 TMEM86BQ8N661 226 aa15.86■□□□□ 0.13
NCKIPSD-209ENST00000470006 LINC01006Q8NI28 216 aa15.86■□□□□ 0.13
NCKIPSD-209ENST00000470006 NSMAFQ92636 917 aa15.86■□□□□ 0.13
NCKIPSD-209ENST00000470006 C4orf45Q96LM5 186 aa15.86■□□□□ 0.13
NCKIPSD-209ENST00000470006 SIGLEC11Q96RL6 698 aa15.86■□□□□ 0.13
NCKIPSD-209ENST00000470006 ZNF607Q96SK3 696 aa15.86■□□□□ 0.13
NCKIPSD-209ENST00000470006 MCHR1Q99705 422 aa15.86■□□□□ 0.13
NCKIPSD-209ENST00000470006 NUDT16L1Q9BRJ7 211 aaKnown RBP15.86■□□□□ 0.13
NCKIPSD-209ENST00000470006 PRDM13Q9H4Q3 707 aa15.86■□□□□ 0.13
NCKIPSD-209ENST00000470006 KIF17Q9P2E2 1029 aa15.86■□□□□ 0.13
NCKIPSD-209ENST00000470006 MIOXQ9UGB7 285 aa15.86■□□□□ 0.13
NCKIPSD-209ENST00000470006 KIR2DS1A0A191URI9 304 aa15.85■□□□□ 0.13
NCKIPSD-209ENST00000470006 G3V4G9 280 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms