RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 PLEKHG7Q6ZR37 379 aa11.25□□□□□ -0.61
TRAF4-208ENST00000469529 HIST2H3AQ71DI3 136 aa11.25□□□□□ -0.61
TRAF4-208ENST00000469529 P4HA3Q7Z4N8 544 aa11.25□□□□□ -0.61
TRAF4-208ENST00000469529 SYT9Q86SS6 491 aa11.25□□□□□ -0.61
TRAF4-208ENST00000469529 LHFPL3Q86UP9 236 aa11.25□□□□□ -0.61
TRAF4-208ENST00000469529 GPR137CQ8N3F9 429 aa11.25□□□□□ -0.61
TRAF4-208ENST00000469529 KLHL36Q8N4N3 616 aa11.25□□□□□ -0.61
TRAF4-208ENST00000469529 OR5M9Q8NGP3 310 aa11.25□□□□□ -0.61
TRAF4-208ENST00000469529 APH1AQ96BI3 265 aa11.25□□□□□ -0.61
TRAF4-208ENST00000469529 TRIB1Q96RU8 372 aa11.25□□□□□ -0.61
TRAF4-208ENST00000469529 MGLLQ99685 303 aa11.25□□□□□ -0.61
TRAF4-208ENST00000469529 ULBP2Q9BZM5 246 aa11.25□□□□□ -0.61
TRAF4-208ENST00000469529 TP63Q9H3D4 680 aaPredicted RBP11.25□□□□□ -0.61
TRAF4-208ENST00000469529 GPR35Q9HC97 309 aa11.25□□□□□ -0.61
TRAF4-208ENST00000469529 POLE4Q9NR33 117 aa11.25□□□□□ -0.61
TRAF4-208ENST00000469529 ASF1BQ9NVP2 202 aa11.25□□□□□ -0.61
TRAF4-208ENST00000469529 BABAM2Q9NXR7 383 aa11.25□□□□□ -0.61
TRAF4-208ENST00000469529 CYB5R1Q9UHQ9 305 aa11.25□□□□□ -0.61
TRAF4-208ENST00000469529 FAM171A2A8MVW0 826 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 ZNF670-ZNF695F2Z2N8 137 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 ZNF701M0R085 212 aaPredicted RBP11.24□□□□□ -0.61
TRAF4-208ENST00000469529 PRRG2O14669 202 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 MYL12BO14950 172 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 SELENOFO60613 162 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 ZNF254O75437 659 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 INMTO95050 263 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 MT-ND5P03915 603 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 LCKP06239 509 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 TACSTD2P09758 323 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 CD53P19397 219 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 DCTDP32321 178 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 KIR2DL2P43627 348 aaPredicted RBP11.24□□□□□ -0.61
TRAF4-208ENST00000469529 GP2P55259 537 aaKnown RBP11.24□□□□□ -0.61
TRAF4-208ENST00000469529 RBPJQ06330 500 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 RAB39AQ14964 217 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 NEDD8Q15843 81 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 TIGD6Q17RP2 521 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 CCDC58Q4VC31 144 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 C1orf185Q5T7R7 199 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 TSPO2Q5TGU0 170 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 CARD17Q5XLA6 110 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 FBXW9Q5XUX1 488 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 SLC18B1Q6NT16 456 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 SEM1Q6ZVN7 128 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 DPY19L4Q7Z388 723 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 ABHD12BQ7Z5M8 362 aaPredicted RBP11.24□□□□□ -0.61
TRAF4-208ENST00000469529 GPR141Q7Z602 305 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 DOLPP1Q86YN1 238 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 ERI1Q8IV48 349 aaKnown RBP11.24□□□□□ -0.61
TRAF4-208ENST00000469529 OR10H4Q8NGA5 316 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 OR6K3Q8NGY3 331 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 C11orf40Q8WZ69 217 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 NABP1Q96AH0 204 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 ZNF775Q96BV0 537 aaPredicted RBP11.24□□□□□ -0.61
TRAF4-208ENST00000469529 OR5M11Q96RB7 305 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 ALG8Q9BVK2 526 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 FAM192AQ9GZU8 254 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 NELFAQ9H3P2 528 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 LUZP4Q9P127 313 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 MALT1Q9UDY8 824 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 EMC9Q9Y3B6 208 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 FAM215AQ9Y5M1 114 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 DNAJC13O75165 2243 aa11.24□□□□□ -0.61
TRAF4-208ENST00000469529 ARPC4-TTLL3A0A0A6YYG9 625 aa11.23□□□□□ -0.61
TRAF4-208ENST00000469529 TVP23AA6NH52 213 aa11.23□□□□□ -0.61
TRAF4-208ENST00000469529 APOL3O95236 402 aa11.23□□□□□ -0.61
TRAF4-208ENST00000469529 IL18BPO95998 194 aa11.23□□□□□ -0.61
TRAF4-208ENST00000469529 HLA-DQA2P01906 255 aa11.23□□□□□ -0.61
TRAF4-208ENST00000469529 MRPL3P09001 348 aaKnown RBP11.23□□□□□ -0.61
TRAF4-208ENST00000469529 CST2P09228 141 aa11.23□□□□□ -0.61
TRAF4-208ENST00000469529 ABOP16442 354 aa11.23□□□□□ -0.61
TRAF4-208ENST00000469529 MSR1P21757 451 aa11.23□□□□□ -0.61
TRAF4-208ENST00000469529 CTSSP25774 331 aa11.23□□□□□ -0.61
TRAF4-208ENST00000469529 NAA10P41227 235 aaPredicted RBP11.23□□□□□ -0.61
TRAF4-208ENST00000469529 TGM4P49221 684 aa11.23□□□□□ -0.61
TRAF4-208ENST00000469529 SH3BGRP55822 239 aaPredicted RBP11.23□□□□□ -0.61
TRAF4-208ENST00000469529 TAS2R43P59537 309 aa11.23□□□□□ -0.61
TRAF4-208ENST00000469529 ADAM8P78325 824 aa11.23□□□□□ -0.61
TRAF4-208ENST00000469529 TLE1Q04724 770 aa11.23□□□□□ -0.61
TRAF4-208ENST00000469529 DBPQ10586 325 aaPredicted RBP11.23□□□□□ -0.61
TRAF4-208ENST00000469529 C1QTNF12Q5T7M4 302 aa11.23□□□□□ -0.61
TRAF4-208ENST00000469529 ZNF585AQ6P3V2 769 aa11.23□□□□□ -0.61
TRAF4-208ENST00000469529 FDX2Q6P4F2 183 aa11.23□□□□□ -0.61
TRAF4-208ENST00000469529 KCTD18Q6PI47 426 aaPredicted RBP11.23□□□□□ -0.61
TRAF4-208ENST00000469529 LYPD4Q6UWN0 246 aa11.23□□□□□ -0.61
TRAF4-208ENST00000469529 GFRALQ6UXV0 394 aa11.23□□□□□ -0.61
TRAF4-208ENST00000469529 RPTNQ6XPR3 784 aa11.23□□□□□ -0.61
TRAF4-208ENST00000469529 NUFIP2Q7Z417 695 aaKnown RBP11.23□□□□□ -0.61
TRAF4-208ENST00000469529 ATCAYQ86WG3 371 aa11.23□□□□□ -0.61
TRAF4-208ENST00000469529 ZNF100Q8IYN0 542 aa11.23□□□□□ -0.61
TRAF4-208ENST00000469529 C9orf106Q8NAJ2 232 aa11.23□□□□□ -0.61
TRAF4-208ENST00000469529 ST6GALNAC3Q8NDV1 305 aa11.23□□□□□ -0.61
TRAF4-208ENST00000469529 NSMAFQ92636 917 aa11.23□□□□□ -0.61
TRAF4-208ENST00000469529 TMIGD2Q96BF3 282 aa11.23□□□□□ -0.61
TRAF4-208ENST00000469529 DGCR14Q96DF8 476 aaKnown RBP11.23□□□□□ -0.61
TRAF4-208ENST00000469529 BCL7BQ9BQE9 202 aa11.23□□□□□ -0.61
TRAF4-208ENST00000469529 TTYH2Q9BSA4 534 aa11.23□□□□□ -0.61
TRAF4-208ENST00000469529 RERGLQ9H628 205 aa11.23□□□□□ -0.61
TRAF4-208ENST00000469529 CRLF2Q9HC73 371 aa11.23□□□□□ -0.61
TRAF4-208ENST00000469529 SLC7A10Q9NS82 523 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms