RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 SLC25A47Q6Q0C1 308 aa10.38□□□□□ -0.75
HDAC3-204ENST00000469207 RFPL4BQ6ZWI9 263 aa10.38□□□□□ -0.75
HDAC3-204ENST00000469207 PATL1Q86TB9 770 aaKnown RBP10.38□□□□□ -0.75
HDAC3-204ENST00000469207 BCL6BQ8N143 479 aaPredicted RBP10.38□□□□□ -0.75
HDAC3-204ENST00000469207 BPIFB2Q8N4F0 458 aa10.38□□□□□ -0.75
HDAC3-204ENST00000469207 DPP10Q8N608 796 aa10.38□□□□□ -0.75
HDAC3-204ENST00000469207 SIGLECL1Q8N7X8 197 aa10.38□□□□□ -0.75
HDAC3-204ENST00000469207 SGMS2Q8NHU3 365 aa10.38□□□□□ -0.75
HDAC3-204ENST00000469207 ABHD4Q8TB40 342 aa10.38□□□□□ -0.75
HDAC3-204ENST00000469207 KLF14Q8TD94 323 aaPredicted RBP10.38□□□□□ -0.75
HDAC3-204ENST00000469207 DVL3Q92997 716 aaPredicted RBP10.38□□□□□ -0.75
HDAC3-204ENST00000469207 SGTBQ96EQ0 304 aa10.38□□□□□ -0.75
HDAC3-204ENST00000469207 ELMOD3Q96FG2 381 aa10.38□□□□□ -0.75
HDAC3-204ENST00000469207 TIMD4Q96H15 378 aa10.38□□□□□ -0.75
HDAC3-204ENST00000469207 MPP4Q96JB8 637 aa10.38□□□□□ -0.75
HDAC3-204ENST00000469207 RBM4Q9BWF3 364 aaKnown RBP10.38□□□□□ -0.75
HDAC3-204ENST00000469207 SUCNR1Q9BXA5 334 aa10.38□□□□□ -0.75
HDAC3-204ENST00000469207 PCDHAC1Q9H158 963 aa10.38□□□□□ -0.75
HDAC3-204ENST00000469207 WNT5BQ9H1J7 359 aa10.38□□□□□ -0.75
HDAC3-204ENST00000469207 C1orf198Q9H425 327 aa10.38□□□□□ -0.75
HDAC3-204ENST00000469207 POFUT1Q9H488 388 aa10.38□□□□□ -0.75
HDAC3-204ENST00000469207 NPHS2Q9NP85 383 aa10.38□□□□□ -0.75
HDAC3-204ENST00000469207 CCNB1IP1Q9NPC3 277 aa10.38□□□□□ -0.75
HDAC3-204ENST00000469207 INIPQ9NRY2 104 aa10.38□□□□□ -0.75
HDAC3-204ENST00000469207 EGFL7Q9UHF1 273 aa10.38□□□□□ -0.75
HDAC3-204ENST00000469207 KLHL21Q9UJP4 597 aa10.38□□□□□ -0.75
HDAC3-204ENST00000469207 CMYA5Q8N3K9 4069 aa10.37□□□□□ -0.75
HDAC3-204ENST00000469207 ENTPD5O75356 428 aa10.37□□□□□ -0.75
HDAC3-204ENST00000469207 FSHBP01225 129 aa10.37□□□□□ -0.75
HDAC3-204ENST00000469207 SBK2P0C263 348 aa10.37□□□□□ -0.75
HDAC3-204ENST00000469207 PCGF2P35227 344 aa10.37□□□□□ -0.75
HDAC3-204ENST00000469207 ZNF133P52736 654 aaPredicted RBP10.37□□□□□ -0.75
HDAC3-204ENST00000469207 MRPS34P82930 218 aaKnown RBP10.37□□□□□ -0.75
HDAC3-204ENST00000469207 TOP3AQ13472 1001 aaPredicted RBP10.37□□□□□ -0.75
HDAC3-204ENST00000469207 NFYCQ13952 458 aa10.37□□□□□ -0.75
HDAC3-204ENST00000469207 MOGQ16653 247 aa10.37□□□□□ -0.75
HDAC3-204ENST00000469207 NRN1LQ496H8 165 aa10.37□□□□□ -0.75
HDAC3-204ENST00000469207 RABL3Q5HYI8 236 aa10.37□□□□□ -0.75
HDAC3-204ENST00000469207 OTPQ5XKR4 325 aa10.37□□□□□ -0.75
HDAC3-204ENST00000469207 DPPA2Q7Z7J5 298 aa10.37□□□□□ -0.75
HDAC3-204ENST00000469207 IGFN1Q86VF2 1251 aa10.37□□□□□ -0.75
HDAC3-204ENST00000469207 JAZF1Q86VZ6 243 aa10.37□□□□□ -0.75
HDAC3-204ENST00000469207 JMJD8Q96S16 334 aa10.37□□□□□ -0.75
HDAC3-204ENST00000469207 SLC19A3Q9BZV2 496 aa10.37□□□□□ -0.75
HDAC3-204ENST00000469207 KCNN2Q9H2S1 579 aa10.37□□□□□ -0.75
HDAC3-204ENST00000469207 EIF3KQ9UBQ5 218 aaKnown RBP10.37□□□□□ -0.75
HDAC3-204ENST00000469207 RIMS3Q9UJD0 308 aa10.37□□□□□ -0.75
HDAC3-204ENST00000469207 MEGF8Q7Z7M0 2845 aa10.37□□□□□ -0.75
HDAC3-204ENST00000469207 J3QLI3 93 aa10.36□□□□□ -0.75
HDAC3-204ENST00000469207 FBP2O00757 339 aa10.36□□□□□ -0.75
HDAC3-204ENST00000469207 ANGPT2O15123 496 aa10.36□□□□□ -0.75
HDAC3-204ENST00000469207 TMPRSS2O15393 492 aa10.36□□□□□ -0.75
HDAC3-204ENST00000469207 MT-ND5P03915 603 aa10.36□□□□□ -0.75
HDAC3-204ENST00000469207 TSPAN19P0C672 248 aa10.36□□□□□ -0.75
HDAC3-204ENST00000469207 GDI2P50395 445 aaKnown RBP10.36□□□□□ -0.75
HDAC3-204ENST00000469207 TAS2R41P59536 307 aa10.36□□□□□ -0.75
HDAC3-204ENST00000469207 PPP1CBP62140 327 aa10.36□□□□□ -0.75
HDAC3-204ENST00000469207 CD47Q08722 323 aa10.36□□□□□ -0.75
HDAC3-204ENST00000469207 VMACQ2NL98 169 aa10.36□□□□□ -0.75
HDAC3-204ENST00000469207 MMEL1Q495T6 779 aa10.36□□□□□ -0.75
HDAC3-204ENST00000469207 TTMPQ5BVD1 217 aa10.36□□□□□ -0.75
HDAC3-204ENST00000469207 FAM209AQ5JX71 171 aa10.36□□□□□ -0.75
HDAC3-204ENST00000469207 AGBL2Q5U5Z8 902 aa10.36□□□□□ -0.75
HDAC3-204ENST00000469207 FAM27BQ5VT28 67 aa10.36□□□□□ -0.75
HDAC3-204ENST00000469207 MBNL2Q5VZF2 373 aaKnown RBP10.36□□□□□ -0.75
HDAC3-204ENST00000469207 NANOGP8Q6NSW7 305 aa10.36□□□□□ -0.75
HDAC3-204ENST00000469207 ZNF774Q6NX45 483 aa10.36□□□□□ -0.75
HDAC3-204ENST00000469207 MICU2Q8IYU8 434 aa10.36□□□□□ -0.75
HDAC3-204ENST00000469207 DEFB108BQ8NET1 73 aa10.36□□□□□ -0.75
HDAC3-204ENST00000469207 TMEM239Q8WW34 195 aa10.36□□□□□ -0.75
HDAC3-204ENST00000469207 LRRC58Q96CX6 371 aa10.36□□□□□ -0.75
HDAC3-204ENST00000469207 ZMYND19Q96E35 227 aaPredicted RBP10.36□□□□□ -0.75
HDAC3-204ENST00000469207 C1orf147Q96MC9 270 aaPredicted RBP10.36□□□□□ -0.75
HDAC3-204ENST00000469207 ZNF48Q96MX3 618 aaPredicted RBP10.36□□□□□ -0.75
HDAC3-204ENST00000469207 OR2H1Q9GZK4 316 aa10.36□□□□□ -0.75
HDAC3-204ENST00000469207 DDX28Q9NUL7 540 aaKnown RBP10.36□□□□□ -0.75
HDAC3-204ENST00000469207 ZNF69Q9UC07 566 aa10.36□□□□□ -0.75
HDAC3-204ENST00000469207 NPTNQ9Y639 398 aa10.36□□□□□ -0.75
HDAC3-204ENST00000469207 PLSCR5A0PG75 271 aa10.35□□□□□ -0.75
HDAC3-204ENST00000469207 LIMS1P48059 325 aa10.35□□□□□ -0.75
HDAC3-204ENST00000469207 DAP3P51398 398 aaKnown RBP10.35□□□□□ -0.75
HDAC3-204ENST00000469207 PSG7Q13046 419 aa10.35□□□□□ -0.75
HDAC3-204ENST00000469207 KLF17Q5JT82 389 aaPredicted RBP10.35□□□□□ -0.75
HDAC3-204ENST00000469207 CCDC80Q76M96 950 aa10.35□□□□□ -0.75
HDAC3-204ENST00000469207 TEX29Q8N6K0 151 aa10.35□□□□□ -0.75
HDAC3-204ENST00000469207 ST7LQ8TDW4 575 aa10.35□□□□□ -0.75
HDAC3-204ENST00000469207 DYDC1Q8WWB3 177 aa10.35□□□□□ -0.75
HDAC3-204ENST00000469207 C4orf45Q96LM5 186 aa10.35□□□□□ -0.75
HDAC3-204ENST00000469207 TXNIPQ9H3M7 391 aa10.35□□□□□ -0.75
HDAC3-204ENST00000469207 RABEP2Q9H5N1 569 aa10.35□□□□□ -0.75
HDAC3-204ENST00000469207 PKD1L1Q8TDX9 2849 aa10.35□□□□□ -0.75
HDAC3-204ENST00000469207 MGAM2Q2M2H8 2515 aa10.35□□□□□ -0.75
HDAC3-204ENST00000469207 IGHV3OR16-10A0A075B7F0 116 aa10.34□□□□□ -0.75
HDAC3-204ENST00000469207 A0A1W2PPL8 197 aa10.34□□□□□ -0.75
HDAC3-204ENST00000469207 CENPBD1B2RD01 187 aa10.34□□□□□ -0.75
HDAC3-204ENST00000469207 H7C1C5 153 aa10.34□□□□□ -0.75
HDAC3-204ENST00000469207 ZNF205O95201 554 aa10.34□□□□□ -0.75
HDAC3-204ENST00000469207 IGHV2-70P01814 119 aa10.34□□□□□ -0.75
HDAC3-204ENST00000469207 HKR1P10072 659 aa10.34□□□□□ -0.75
HDAC3-204ENST00000469207 FPR2P25090 351 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms