RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 WNT5BQ9H1J7 359 aa20.84■□□□□ 0.93
PTCH1-210ENST00000468211 KCNN2Q9H2S1 579 aa20.84■□□□□ 0.93
PTCH1-210ENST00000468211 ARGLU1Q9NWB6 273 aaPredicted RBP20.84■□□□□ 0.93
PTCH1-210ENST00000468211 CMTM6Q9NX76 183 aa20.84■□□□□ 0.93
PTCH1-210ENST00000468211 TENM1Q9UKZ4 2725 aa20.84■□□□□ 0.93
PTCH1-210ENST00000468211 IGHV1-69-2A0A0G2JMI3 117 aa20.83■□□□□ 0.93
PTCH1-210ENST00000468211 C5orf49A4QMS7 147 aa20.83■□□□□ 0.93
PTCH1-210ENST00000468211 J3KTA2 159 aa20.83■□□□□ 0.93
PTCH1-210ENST00000468211 VENTXO95231 258 aa20.83■□□□□ 0.93
PTCH1-210ENST00000468211 LAP3P28838 519 aa20.83■□□□□ 0.93
PTCH1-210ENST00000468211 RPL27P61353 136 aaKnown RBP20.83■□□□□ 0.93
PTCH1-210ENST00000468211 ST3GAL3Q11203 375 aa20.83■□□□□ 0.93
PTCH1-210ENST00000468211 MAPRE2Q15555 327 aa20.83■□□□□ 0.93
PTCH1-210ENST00000468211 THEM4Q5T1C6 240 aa20.83■□□□□ 0.93
PTCH1-210ENST00000468211 C1orf229Q6ZS94 237 aaPredicted RBP20.83■□□□□ 0.93
PTCH1-210ENST00000468211 POU5F2Q8N7G0 328 aa20.83■□□□□ 0.93
PTCH1-210ENST00000468211 OR51F2Q8NH61 342 aa20.83■□□□□ 0.93
PTCH1-210ENST00000468211 IPCEF1Q8WWN9 437 aaPredicted RBP20.83■□□□□ 0.93
PTCH1-210ENST00000468211 OCEL1Q9H607 264 aa20.83■□□□□ 0.93
PTCH1-210ENST00000468211 ZNF665Q9H7R5 613 aa20.83■□□□□ 0.93
PTCH1-210ENST00000468211 GID8Q9NWU2 228 aa20.83■□□□□ 0.93
PTCH1-210ENST00000468211 TRAV27A0A087WT01 109 aa20.82■□□□□ 0.92
PTCH1-210ENST00000468211 ELOVL7A1L3X0 281 aa20.82■□□□□ 0.92
PTCH1-210ENST00000468211 FFAR1O14842 300 aa20.82■□□□□ 0.92
PTCH1-210ENST00000468211 AVPP01185 164 aa20.82■□□□□ 0.92
PTCH1-210ENST00000468211 IGHMP01871 453 aa20.82■□□□□ 0.92
PTCH1-210ENST00000468211 DRD4P21917 467 aa20.82■□□□□ 0.92
PTCH1-210ENST00000468211 CTXN1P60606 82 aa20.82■□□□□ 0.92
PTCH1-210ENST00000468211 HNRNPA0Q13151 305 aaKnown RBP20.82■□□□□ 0.92
PTCH1-210ENST00000468211 THSD4Q6ZMP0 1018 aa20.82■□□□□ 0.92
PTCH1-210ENST00000468211 RFPL4BQ6ZWI9 263 aa20.82■□□□□ 0.92
PTCH1-210ENST00000468211 NRMQ8IXM6 262 aa20.82■□□□□ 0.92
PTCH1-210ENST00000468211 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP20.82■□□□□ 0.92
PTCH1-210ENST00000468211 PCYOX1LQ8NBM8 494 aa20.82■□□□□ 0.92
PTCH1-210ENST00000468211 OR51A7Q8NH64 312 aa20.82■□□□□ 0.92
PTCH1-210ENST00000468211 SLC25A40Q8TBP6 338 aa20.82■□□□□ 0.92
PTCH1-210ENST00000468211 RCN3Q96D15 328 aa20.82■□□□□ 0.92
PTCH1-210ENST00000468211 ALG12Q9BV10 488 aa20.82■□□□□ 0.92
PTCH1-210ENST00000468211 OR2H1Q9GZK4 316 aa20.82■□□□□ 0.92
PTCH1-210ENST00000468211 ARMCX1Q9P291 453 aa20.82■□□□□ 0.92
PTCH1-210ENST00000468211 GRIP1Q9Y3R0 1128 aa20.82■□□□□ 0.92
PTCH1-210ENST00000468211 TPD52L2O43399 206 aaKnown RBP20.81■□□□□ 0.92
PTCH1-210ENST00000468211 DEAF1O75398 565 aaPredicted RBP20.81■□□□□ 0.92
PTCH1-210ENST00000468211 NGFP01138 241 aa20.81■□□□□ 0.92
PTCH1-210ENST00000468211 IGHV1-46P01743 117 aa20.81■□□□□ 0.92
PTCH1-210ENST00000468211 SCG5P05408 212 aa20.81■□□□□ 0.92
PTCH1-210ENST00000468211 GDI2P50395 445 aaKnown RBP20.81■□□□□ 0.92
PTCH1-210ENST00000468211 ZNF81P51508 661 aa20.81■□□□□ 0.92
PTCH1-210ENST00000468211 MMP15P51511 669 aa20.81■□□□□ 0.92
PTCH1-210ENST00000468211 TAF11Q15544 211 aa20.81■□□□□ 0.92
PTCH1-210ENST00000468211 SPRNQ5BIV9 151 aa20.81■□□□□ 0.92
PTCH1-210ENST00000468211 FOXL2NBQ6ZUU3 175 aa20.81■□□□□ 0.92
PTCH1-210ENST00000468211 OR2J1Q9GZK6 312 aa20.81■□□□□ 0.92
PTCH1-210ENST00000468211 G6PC2Q9NQR9 355 aa20.81■□□□□ 0.92
PTCH1-210ENST00000468211 DECR2Q9NUI1 292 aa20.81■□□□□ 0.92
PTCH1-210ENST00000468211 MRGBPQ9NV56 204 aa20.81■□□□□ 0.92
PTCH1-210ENST00000468211 WIPI2Q9Y4P8 454 aa20.81■□□□□ 0.92
PTCH1-210ENST00000468211 ZSCAN5BA6NJL1 495 aa20.8■□□□□ 0.92
PTCH1-210ENST00000468211 HAX1O00165 279 aa20.8■□□□□ 0.92
PTCH1-210ENST00000468211 SPRY3O43610 288 aa20.8■□□□□ 0.92
PTCH1-210ENST00000468211 ENDOGQ14249 297 aaKnown RBP20.8■□□□□ 0.92
PTCH1-210ENST00000468211 ZNF718Q3SXZ3 478 aa20.8■□□□□ 0.92
PTCH1-210ENST00000468211 ZNF774Q6NX45 483 aa20.8■□□□□ 0.92
PTCH1-210ENST00000468211 FAHD2BQ6P2I3 314 aaPredicted RBP20.8■□□□□ 0.92
PTCH1-210ENST00000468211 SLC15A3Q8IY34 581 aa20.8■□□□□ 0.92
PTCH1-210ENST00000468211 OFCC1Q8IZS5 231 aa20.8■□□□□ 0.92
PTCH1-210ENST00000468211 SEMA6DQ8NFY4 1073 aa20.8■□□□□ 0.92
PTCH1-210ENST00000468211 OR13C2Q8NGS9 318 aa20.8■□□□□ 0.92
PTCH1-210ENST00000468211 KLF14Q8TD94 323 aaPredicted RBP20.8■□□□□ 0.92
PTCH1-210ENST00000468211 FAHD2AQ96GK7 314 aa20.8■□□□□ 0.92
PTCH1-210ENST00000468211 RBP7Q96R05 134 aa20.8■□□□□ 0.92
PTCH1-210ENST00000468211 SAP30LQ9HAJ7 183 aa20.8■□□□□ 0.92
PTCH1-210ENST00000468211 EIF3KQ9UBQ5 218 aaKnown RBP20.8■□□□□ 0.92
PTCH1-210ENST00000468211 CAPN7Q9Y6W3 813 aa20.8■□□□□ 0.92
PTCH1-210ENST00000468211 TRAV20A0A0B4J274 112 aa20.79■□□□□ 0.92
PTCH1-210ENST00000468211 H7C1C5 153 aa20.79■□□□□ 0.92
PTCH1-210ENST00000468211 PLPP2O43688 288 aa20.79■□□□□ 0.92
PTCH1-210ENST00000468211 RGS9O75916 674 aaPredicted RBP20.79■□□□□ 0.92
PTCH1-210ENST00000468211 CST2P09228 141 aa20.79■□□□□ 0.92
PTCH1-210ENST00000468211 RBMXP38159 391 aaKnown RBP20.79■□□□□ 0.92
PTCH1-210ENST00000468211 LCN6P62502 163 aa20.79■□□□□ 0.92
PTCH1-210ENST00000468211 PRKCDQ05655 676 aa20.79■□□□□ 0.92
PTCH1-210ENST00000468211 MOGQ16653 247 aa20.79■□□□□ 0.92
PTCH1-210ENST00000468211 TBPL2Q6SJ96 375 aa20.79■□□□□ 0.92
PTCH1-210ENST00000468211 DYSFO75923 2080 aa20.78■□□□□ 0.92
PTCH1-210ENST00000468211 A0A1W2PPL8 197 aa20.78■□□□□ 0.92
PTCH1-210ENST00000468211 EFCAB9A8MZ26 197 aa20.78■□□□□ 0.92
PTCH1-210ENST00000468211 PRSS23O95084 383 aa20.78■□□□□ 0.92
PTCH1-210ENST00000468211 MPZL1O95297 269 aa20.78■□□□□ 0.92
PTCH1-210ENST00000468211 NR2C1P13056 603 aa20.78■□□□□ 0.92
PTCH1-210ENST00000468211 ZNF26P17031 533 aaPredicted RBP20.78■□□□□ 0.92
PTCH1-210ENST00000468211 GCH1P30793 250 aa20.78■□□□□ 0.92
PTCH1-210ENST00000468211 PPP1CBP62140 327 aa20.78■□□□□ 0.92
PTCH1-210ENST00000468211 TEKQ02763 1124 aa20.78■□□□□ 0.92
PTCH1-210ENST00000468211 TRAM2Q15035 370 aa20.78■□□□□ 0.92
PTCH1-210ENST00000468211 MBNL2Q5VZF2 373 aaKnown RBP20.78■□□□□ 0.92
PTCH1-210ENST00000468211 ACSM5Q6NUN0 579 aa20.78■□□□□ 0.92
PTCH1-210ENST00000468211 ABHD4Q8TB40 342 aa20.78■□□□□ 0.92
PTCH1-210ENST00000468211 FNDC11Q9BVV2 318 aa20.78■□□□□ 0.92
PTCH1-210ENST00000468211 TIMM10BQ9Y5J6 103 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms