RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 SEMA6AQ9H2E6 1030 aa8.46□□□□□ -1.06
HDAC3-203ENST00000467533 CCNB1IP1Q9NPC3 277 aa8.46□□□□□ -1.06
HDAC3-203ENST00000467533 KLHL14Q9P2G3 628 aa8.46□□□□□ -1.06
HDAC3-203ENST00000467533 IL19Q9UHD0 177 aa8.46□□□□□ -1.06
HDAC3-203ENST00000467533 ZNF443Q9Y2A4 671 aaPredicted RBP8.46□□□□□ -1.06
HDAC3-203ENST00000467533 C11orf98E9PRG8 122 aa8.45□□□□□ -1.06
HDAC3-203ENST00000467533 IFNL4K9M1U5 179 aa8.45□□□□□ -1.06
HDAC3-203ENST00000467533 ZSCAN12O43309 604 aa8.45□□□□□ -1.06
HDAC3-203ENST00000467533 C1QCP02747 245 aa8.45□□□□□ -1.06
HDAC3-203ENST00000467533 MMP7P09237 267 aaPredicted RBP8.45□□□□□ -1.06
HDAC3-203ENST00000467533 CRATP43155 626 aa8.45□□□□□ -1.06
HDAC3-203ENST00000467533 GDI2P50395 445 aaKnown RBP8.45□□□□□ -1.06
HDAC3-203ENST00000467533 KRTAP10-11P60412 298 aa8.45□□□□□ -1.06
HDAC3-203ENST00000467533 HOXC5Q00444 222 aa8.45□□□□□ -1.06
HDAC3-203ENST00000467533 RNF220Q5VTB9 566 aa8.45□□□□□ -1.06
HDAC3-203ENST00000467533 LRRC34Q8IZ02 419 aa8.45□□□□□ -1.06
HDAC3-203ENST00000467533 CLIP4Q8N3C7 705 aa8.45□□□□□ -1.06
HDAC3-203ENST00000467533 SCAIQ8N9R8 606 aa8.45□□□□□ -1.06
HDAC3-203ENST00000467533 SPATA4Q8NEY3 305 aa8.45□□□□□ -1.06
HDAC3-203ENST00000467533 AGR3Q8TD06 166 aa8.45□□□□□ -1.06
HDAC3-203ENST00000467533 ZNF566Q969W8 418 aa8.45□□□□□ -1.06
HDAC3-203ENST00000467533 POM121L2Q96KW2 1035 aa8.45□□□□□ -1.06
HDAC3-203ENST00000467533 CACYBPQ9HB71 228 aaKnown RBP8.45□□□□□ -1.06
HDAC3-203ENST00000467533 GCM1Q9NP62 436 aa8.45□□□□□ -1.06
HDAC3-203ENST00000467533 ZDHHC18Q9NUE0 388 aa8.45□□□□□ -1.06
HDAC3-203ENST00000467533 CAB39Q9Y376 341 aaPredicted RBP8.45□□□□□ -1.06
HDAC3-203ENST00000467533 A0A087WUV0 522 aaPredicted RBP8.44□□□□□ -1.06
HDAC3-203ENST00000467533 GLRA3O75311 464 aa8.44□□□□□ -1.06
HDAC3-203ENST00000467533 PROCP04070 461 aa8.44□□□□□ -1.06
HDAC3-203ENST00000467533 LIPFP07098 398 aa8.44□□□□□ -1.06
HDAC3-203ENST00000467533 NHLRC4P0CG21 123 aaPredicted RBP8.44□□□□□ -1.06
HDAC3-203ENST00000467533 G6PDP11413 515 aa8.44□□□□□ -1.06
HDAC3-203ENST00000467533 SLC6A2P23975 617 aa8.44□□□□□ -1.06
HDAC3-203ENST00000467533 ZNF84P51523 738 aa8.44□□□□□ -1.06
HDAC3-203ENST00000467533 ARHGDIAP52565 204 aa8.44□□□□□ -1.06
HDAC3-203ENST00000467533 COX10Q12887 443 aa8.44□□□□□ -1.06
HDAC3-203ENST00000467533 PSG7Q13046 419 aa8.44□□□□□ -1.06
HDAC3-203ENST00000467533 DCTN2Q13561 401 aaKnown RBP8.44□□□□□ -1.06
HDAC3-203ENST00000467533 MELKQ14680 651 aa8.44□□□□□ -1.06
HDAC3-203ENST00000467533 C6orf136Q5SQH8 315 aa8.44□□□□□ -1.06
HDAC3-203ENST00000467533 CD276Q5ZPR3 534 aa8.44□□□□□ -1.06
HDAC3-203ENST00000467533 LYPD2Q6UXB3 125 aa8.44□□□□□ -1.06
HDAC3-203ENST00000467533 Q6ZR03 302 aa8.44□□□□□ -1.06
HDAC3-203ENST00000467533 PXKQ7Z7A4 578 aa8.44□□□□□ -1.06
HDAC3-203ENST00000467533 NDUFA11Q86Y39 141 aa8.44□□□□□ -1.06
HDAC3-203ENST00000467533 PIP4P2Q8N4L2 257 aa8.44□□□□□ -1.06
HDAC3-203ENST00000467533 C10orf53Q8N6V4 93 aa8.44□□□□□ -1.06
HDAC3-203ENST00000467533 PNLDC1Q8NA58 520 aaKnown RBP8.44□□□□□ -1.06
HDAC3-203ENST00000467533 ACMSDQ8TDX5 336 aa8.44□□□□□ -1.06
HDAC3-203ENST00000467533 C10orf82Q8WW14 230 aa8.44□□□□□ -1.06
HDAC3-203ENST00000467533 SLC41A3Q96GZ6 507 aa8.44□□□□□ -1.06
HDAC3-203ENST00000467533 CLPTM1LQ96KA5 538 aa8.44□□□□□ -1.06
HDAC3-203ENST00000467533 SIRPDQ9H106 197 aa8.44□□□□□ -1.06
HDAC3-203ENST00000467533 KCNN2Q9H2S1 579 aa8.44□□□□□ -1.06
HDAC3-203ENST00000467533 ARMC7Q9H6L4 198 aa8.44□□□□□ -1.06
HDAC3-203ENST00000467533 CNTD2Q9H8S5 307 aa8.44□□□□□ -1.06
HDAC3-203ENST00000467533 MAN2C1Q9NTJ4 1040 aa8.44□□□□□ -1.06
HDAC3-203ENST00000467533 DCDC2Q9UHG0 476 aa8.44□□□□□ -1.06
HDAC3-203ENST00000467533 IGKV1D-42A0A075B6H8 117 aa8.43□□□□□ -1.06
HDAC3-203ENST00000467533 LOC100509620A0A075B734 347 aa8.43□□□□□ -1.06
HDAC3-203ENST00000467533 LRRC30A6NM36 301 aa8.43□□□□□ -1.06
HDAC3-203ENST00000467533 OPN1SWP03999 348 aa8.43□□□□□ -1.06
HDAC3-203ENST00000467533 F13BP05160 661 aa8.43□□□□□ -1.06
HDAC3-203ENST00000467533 QDPRP09417 244 aa8.43□□□□□ -1.06
HDAC3-203ENST00000467533 CD28P10747 220 aa8.43□□□□□ -1.06
HDAC3-203ENST00000467533 GSTM3P21266 225 aa8.43□□□□□ -1.06
HDAC3-203ENST00000467533 NPY4RP50391 375 aa8.43□□□□□ -1.06
HDAC3-203ENST00000467533 CLDN8P56748 225 aa8.43□□□□□ -1.06
HDAC3-203ENST00000467533 GNG11P61952 73 aa8.43□□□□□ -1.06
HDAC3-203ENST00000467533 SLC35A2P78381 396 aa8.43□□□□□ -1.06
HDAC3-203ENST00000467533 FAM201AQ5SY85 155 aa8.43□□□□□ -1.06
HDAC3-203ENST00000467533 ANXA8L1Q5VT79 327 aa8.43□□□□□ -1.06
HDAC3-203ENST00000467533 LRFN4Q6PJG9 635 aa8.43□□□□□ -1.06
HDAC3-203ENST00000467533 NHLRC1Q6VVB1 395 aa8.43□□□□□ -1.06
HDAC3-203ENST00000467533 DCDC5Q6ZRR9 648 aa8.43□□□□□ -1.06
HDAC3-203ENST00000467533 SLC35D2Q76EJ3 337 aa8.43□□□□□ -1.06
HDAC3-203ENST00000467533 HOMEZQ8IX15 550 aa8.43□□□□□ -1.06
HDAC3-203ENST00000467533 C1orf87Q8N0U7 546 aa8.43□□□□□ -1.06
HDAC3-203ENST00000467533 OR8J2Q8NGG1 315 aa8.43□□□□□ -1.06
HDAC3-203ENST00000467533 OR6X1Q8NH79 312 aa8.43□□□□□ -1.06
HDAC3-203ENST00000467533 OR5R1Q8NH85 324 aa8.43□□□□□ -1.06
HDAC3-203ENST00000467533 AKR7LQ8NHP1 331 aa8.43□□□□□ -1.06
HDAC3-203ENST00000467533 MUC7Q8TAX7 377 aa8.43□□□□□ -1.06
HDAC3-203ENST00000467533 C3orf30Q96M34 536 aa8.43□□□□□ -1.06
HDAC3-203ENST00000467533 EPYCQ99645 322 aa8.43□□□□□ -1.06
HDAC3-203ENST00000467533 SPATA9Q9BWV2 254 aa8.43□□□□□ -1.06
HDAC3-203ENST00000467533 MMADHCQ9H3L0 296 aaPredicted RBP8.43□□□□□ -1.06
HDAC3-203ENST00000467533 ELOVL3Q9HB03 270 aa8.43□□□□□ -1.06
HDAC3-203ENST00000467533 C12orf10Q9HB07 376 aa8.43□□□□□ -1.06
HDAC3-203ENST00000467533 MRPL39Q9NYK5 338 aaKnown RBP8.43□□□□□ -1.06
HDAC3-203ENST00000467533 P2RX2Q9UBL9 471 aa8.43□□□□□ -1.06
HDAC3-203ENST00000467533 TBK1Q9UHD2 729 aa8.43□□□□□ -1.06
HDAC3-203ENST00000467533 IGHV3-64DA0A0J9YX35 117 aa8.42□□□□□ -1.06
HDAC3-203ENST00000467533 PRSS51A0A1B0GVH4 220 aa8.42□□□□□ -1.06
HDAC3-203ENST00000467533 LRRN3E7EW58 273 aa8.42□□□□□ -1.06
HDAC3-203ENST00000467533 PLPP3O14495 311 aa8.42□□□□□ -1.06
HDAC3-203ENST00000467533 OR6A2O95222 327 aa8.42□□□□□ -1.06
HDAC3-203ENST00000467533 PAHP00439 452 aa8.42□□□□□ -1.06
HDAC3-203ENST00000467533 BGLAPP02818 100 aa8.42□□□□□ -1.06
HDAC3-203ENST00000467533 BCHEP06276 602 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms