RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 LRRC66Q68CR7 880 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 BTNL3Q6UXE8 466 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 STRADAQ7RTN6 431 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 ERASQ7Z444 233 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 BIVMQ86UB2 503 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 OOSP2Q86WS3 158 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 UMODL1-AS1Q8N2C9 162 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 DNAAF3Q8N9W5 541 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 TMEM35BQ8NCS4 154 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 GIPC3Q8TF64 312 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 CA5BP1Q8WTZ4 195 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 FAM172AQ8WUF8 416 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 SELENOMQ8WWX9 145 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 RXFP2Q8WXD0 754 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 N4BP2L2Q92802 583 aaPredicted RBP2.25□□□□□ -2.05
XRN1-206ENST00000467077 COX14Q96I36 57 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 SMIM14Q96QK8 99 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 CRACR2AQ9BSW2 395 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 TMEM121Q9BTD3 319 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 RAB33BQ9H082 229 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 LRRC19Q9H756 370 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 ISG20L2Q9H9L3 353 aaKnown RBP2.25□□□□□ -2.05
XRN1-206ENST00000467077 SLC40A1Q9NP59 571 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 MEPEQ9NQ76 525 aaPredicted RBP2.25□□□□□ -2.05
XRN1-206ENST00000467077 GPATCH2LQ9NWQ4 482 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 RMND1Q9NWS8 449 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 HRASLS2Q9NWW9 162 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 TAS2R3Q9NYW6 316 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 DPM3Q9P2X0 92 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 SLC23A2Q9UGH3 650 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 FOXJ3Q9UPW0 622 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 NEU3Q9UQ49 428 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 MGAT4BQ9UQ53 548 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 MEMO1Q9Y316 297 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 PHF3Q92576 2039 aaKnown RBP2.25□□□□□ -2.05
XRN1-206ENST00000467077 ARHGAP21Q5T5U3 1957 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 GTF3C1Q12789 2109 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 PCNX1Q96RV3 2341 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 CHD3Q12873 2000 aaKnown RBP2.24□□□□□ -2.05
XRN1-206ENST00000467077 RTTNQ86VV8 2226 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 IGLV8-61A0A075B6I0 122 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 TRBV7-9A0A0J9YWB2 115 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 A0A0U1RQV5 110 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 C1orf232A0A0U1RR37 186 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 GSAPA4D1B5 854 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 RGSL1A5PLK6 1076 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 OR6C74A6NCV1 312 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 E7EQ34 232 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 F8WDY8 70 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 SLC17A2O00624 439 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 VPS26AO75436 327 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 B3GALNT1O75752 331 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 KLF7O75840 302 aaPredicted RBP2.24□□□□□ -2.05
XRN1-206ENST00000467077 SERF1AO75920 110 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 SLC25A14O95258 325 aaPredicted RBP2.24□□□□□ -2.05
XRN1-206ENST00000467077 ACTL6AO96019 429 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 IGFBP1P08833 259 aaPredicted RBP2.24□□□□□ -2.05
XRN1-206ENST00000467077 GSTT2P0CG29 244 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 GSTT2BP0CG30 244 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 PNMA6AP0CW24 399 aaPredicted RBP2.24□□□□□ -2.05
XRN1-206ENST00000467077 CPN1P15169 458 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 ZNF30P17039 623 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 ZNF7P17097 686 aaPredicted RBP2.24□□□□□ -2.05
XRN1-206ENST00000467077 CDH5P33151 784 aaPredicted RBP2.24□□□□□ -2.05
XRN1-206ENST00000467077 KPNA2P52292 529 aaKnown RBP2.24□□□□□ -2.05
XRN1-206ENST00000467077 STC1P52823 247 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 MTTPP55157 894 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 MAXP61244 160 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 DCDP81605 110 aaKnown RBP2.24□□□□□ -2.05
XRN1-206ENST00000467077 HTD2P86397 168 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 HSF2Q03933 536 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 XRCC4Q13426 336 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 IL18R1Q13478 541 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 PNOCQ13519 176 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 UBE2V2Q15819 145 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 SHISA6Q6ZSJ9 500 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 NCCRP1Q6ZVX7 275 aaPredicted RBP2.24□□□□□ -2.05
XRN1-206ENST00000467077 ARCQ7LC44 396 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 MISPQ8IVT2 679 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 BBS5Q8N3I7 341 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 C14orf178Q8N769 122 aaPredicted RBP2.24□□□□□ -2.05
XRN1-206ENST00000467077 OR2Y1Q8NGV0 311 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 JOSD2Q8TAC2 188 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 PIH1D2Q8WWB5 315 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 NTAN1Q96AB6 310 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 TADA1Q96BN2 335 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 VSTM2LQ96N03 204 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 TTC25Q96NG3 672 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 TECTBQ96PL2 329 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 PSKH2Q96QS6 385 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 SPATA16Q9BXB7 569 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 HCAR1Q9BXC0 346 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 OR2AG1Q9H205 316 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 SAMSN1Q9NSI8 373 aaKnown RBP2.24□□□□□ -2.05
XRN1-206ENST00000467077 IMP3Q9NV31 184 aaKnown RBP2.24□□□□□ -2.05
XRN1-206ENST00000467077 C1orf123Q9NWV4 160 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 DHCR7Q9UBM7 475 aaKnown RBP2.24□□□□□ -2.05
XRN1-206ENST00000467077 ATP6V1HQ9UI12 483 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 DNAJC12Q9UKB3 198 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 PSMD13Q9UNM6 376 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms