RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 TIGD4Q8IY51 512 aa9.77□□□□□ -0.85
VCP-204ENST00000466100 OR6K6Q8NGW6 343 aa9.77□□□□□ -0.85
VCP-204ENST00000466100 C11orf40Q8WZ69 217 aa9.77□□□□□ -0.85
VCP-204ENST00000466100 BCL2L2Q92843 193 aaPredicted RBP9.77□□□□□ -0.85
VCP-204ENST00000466100 OTULINQ96BN8 352 aa9.77□□□□□ -0.85
VCP-204ENST00000466100 ZMYND19Q96E35 227 aaPredicted RBP9.77□□□□□ -0.85
VCP-204ENST00000466100 Q9H521 79 aa9.77□□□□□ -0.85
VCP-204ENST00000466100 RERGLQ9H628 205 aa9.77□□□□□ -0.85
VCP-204ENST00000466100 CLN6Q9NWW5 311 aa9.77□□□□□ -0.85
VCP-204ENST00000466100 GALNT8Q9NY28 637 aa9.77□□□□□ -0.85
VCP-204ENST00000466100 ZNF224Q9NZL3 707 aa9.77□□□□□ -0.85
VCP-204ENST00000466100 WARS2Q9UGM6 360 aaKnown RBP9.77□□□□□ -0.85
VCP-204ENST00000466100 COMMD3-BMI1R4GMX3 469 aa9.77□□□□□ -0.85
VCP-204ENST00000466100 PTPN13Q12923 2485 aa9.77□□□□□ -0.85
VCP-204ENST00000466100 NKX2-6A6NCS4 301 aa9.76□□□□□ -0.85
VCP-204ENST00000466100 ZNF503-AS2A6NEH8 195 aa9.76□□□□□ -0.85
VCP-204ENST00000466100 TVP23AA6NH52 213 aa9.76□□□□□ -0.85
VCP-204ENST00000466100 DBTP11182 482 aaKnown RBP9.76□□□□□ -0.85
VCP-204ENST00000466100 B4GALT1P15291 398 aa9.76□□□□□ -0.85
VCP-204ENST00000466100 MSR1P21757 451 aa9.76□□□□□ -0.85
VCP-204ENST00000466100 FMO3P31513 532 aa9.76□□□□□ -0.85
VCP-204ENST00000466100 CENPAP49450 140 aa9.76□□□□□ -0.85
VCP-204ENST00000466100 BLVRAP53004 296 aa9.76□□□□□ -0.85
VCP-204ENST00000466100 LSM6P62312 80 aaKnown RBP9.76□□□□□ -0.85
VCP-204ENST00000466100 FAM27E3Q08E93 113 aa9.76□□□□□ -0.85
VCP-204ENST00000466100 TSC22D1Q15714 1073 aa9.76□□□□□ -0.85
VCP-204ENST00000466100 MEP1BQ16820 701 aa9.76□□□□□ -0.85
VCP-204ENST00000466100 TBRG1Q3YBR2 411 aa9.76□□□□□ -0.85
VCP-204ENST00000466100 C6orf141Q5SZD1 244 aa9.76□□□□□ -0.85
VCP-204ENST00000466100 LCN1P1Q5VSP4 162 aa9.76□□□□□ -0.85
VCP-204ENST00000466100 FAM27BQ5VT28 67 aa9.76□□□□□ -0.85
VCP-204ENST00000466100 OTPQ5XKR4 325 aa9.76□□□□□ -0.85
VCP-204ENST00000466100 ANKRD16Q6P6B7 361 aa9.76□□□□□ -0.85
VCP-204ENST00000466100 XKRXQ6PP77 449 aa9.76□□□□□ -0.85
VCP-204ENST00000466100 KLHL24Q6TFL4 600 aa9.76□□□□□ -0.85
VCP-204ENST00000466100 UGT2A3Q6UWM9 527 aa9.76□□□□□ -0.85
VCP-204ENST00000466100 ZNF813Q6ZN06 617 aa9.76□□□□□ -0.85
VCP-204ENST00000466100 SLC22A24Q8N4F4 322 aa9.76□□□□□ -0.85
VCP-204ENST00000466100 ZNF511Q8NB15 262 aa9.76□□□□□ -0.85
VCP-204ENST00000466100 CA5BP1Q8WTZ4 195 aa9.76□□□□□ -0.85
VCP-204ENST00000466100 RFKQ969G6 155 aa9.76□□□□□ -0.85
VCP-204ENST00000466100 Q96MT0 163 aa9.76□□□□□ -0.85
VCP-204ENST00000466100 RHNO1Q9BSD3 238 aa9.76□□□□□ -0.85
VCP-204ENST00000466100 WDR76Q9H967 626 aa9.76□□□□□ -0.85
VCP-204ENST00000466100 SIAEQ9HAT2 523 aa9.76□□□□□ -0.85
VCP-204ENST00000466100 ADGRL4Q9HBW9 690 aa9.76□□□□□ -0.85
VCP-204ENST00000466100 EMC7Q9NPA0 242 aa9.76□□□□□ -0.85
VCP-204ENST00000466100 PLCXD1Q9NUJ7 323 aa9.76□□□□□ -0.85
VCP-204ENST00000466100 MRPS18AQ9NVS2 196 aaKnown RBP9.76□□□□□ -0.85
VCP-204ENST00000466100 ELOVL5Q9NYP7 299 aa9.76□□□□□ -0.85
VCP-204ENST00000466100 CADP27708 2225 aa9.76□□□□□ -0.85
VCP-204ENST00000466100 PLCE1Q9P212 2302 aa9.76□□□□□ -0.85
VCP-204ENST00000466100 CELSR2Q9HCU4 2923 aa9.75□□□□□ -0.85
VCP-204ENST00000466100 J3QKU1 62 aa9.75□□□□□ -0.85
VCP-204ENST00000466100 J3QRE1 110 aa9.75□□□□□ -0.85
VCP-204ENST00000466100 SLC1A7O00341 560 aa9.75□□□□□ -0.85
VCP-204ENST00000466100 SELENOFO60613 162 aa9.75□□□□□ -0.85
VCP-204ENST00000466100 RAD51DO75771 328 aa9.75□□□□□ -0.85
VCP-204ENST00000466100 CLDN14O95500 239 aa9.75□□□□□ -0.85
VCP-204ENST00000466100 CST2P09228 141 aa9.75□□□□□ -0.85
VCP-204ENST00000466100 NPR2P20594 1047 aa9.75□□□□□ -0.85
VCP-204ENST00000466100 UGT2B10P36537 528 aa9.75□□□□□ -0.85
VCP-204ENST00000466100 MTNR1AP48039 350 aa9.75□□□□□ -0.85
VCP-204ENST00000466100 CXCR4P61073 352 aa9.75□□□□□ -0.85
VCP-204ENST00000466100 RPS7P62081 194 aaKnown RBP9.75□□□□□ -0.85
VCP-204ENST00000466100 TGFBR3Q03167 851 aa9.75□□□□□ -0.85
VCP-204ENST00000466100 HIKESHIQ53FT3 197 aa9.75□□□□□ -0.85
VCP-204ENST00000466100 TEX30Q5JUR7 227 aa9.75□□□□□ -0.85
VCP-204ENST00000466100 BHLHA15Q7RTS1 189 aaPredicted RBP9.75□□□□□ -0.85
VCP-204ENST00000466100 SKA3Q8IX90 412 aa9.75□□□□□ -0.85
VCP-204ENST00000466100 C17orf78Q8N4C9 275 aa9.75□□□□□ -0.85
VCP-204ENST00000466100 WDR31Q8NA23 367 aa9.75□□□□□ -0.85
VCP-204ENST00000466100 FGFBP3Q8TAT2 258 aa9.75□□□□□ -0.85
VCP-204ENST00000466100 RNASE6Q93091 150 aaKnown RBP9.75□□□□□ -0.85
VCP-204ENST00000466100 LGALS12Q96DT0 336 aa9.75□□□□□ -0.85
VCP-204ENST00000466100 FBXO17Q96EF6 278 aa9.75□□□□□ -0.85
VCP-204ENST00000466100 RNFT2Q96EX2 444 aa9.75□□□□□ -0.85
VCP-204ENST00000466100 SH3GL3Q99963 347 aa9.75□□□□□ -0.85
VCP-204ENST00000466100 ZNF416Q9BWM5 594 aa9.75□□□□□ -0.85
VCP-204ENST00000466100 OR10A4Q9H209 315 aa9.75□□□□□ -0.85
VCP-204ENST00000466100 SEC61A2Q9H9S3 476 aa9.75□□□□□ -0.85
VCP-204ENST00000466100 AMBNQ9NP70 447 aa9.75□□□□□ -0.85
VCP-204ENST00000466100 FKBP14Q9NWM8 211 aa9.75□□□□□ -0.85
VCP-204ENST00000466100 H2AFY2Q9P0M6 372 aaPredicted RBP9.75□□□□□ -0.85
VCP-204ENST00000466100 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.75□□□□□ -0.85
VCP-204ENST00000466100 LHFPL6Q9Y693 200 aa9.75□□□□□ -0.85
VCP-204ENST00000466100 ICE1Q9Y2F5 2266 aa9.75□□□□□ -0.85
VCP-204ENST00000466100 HEATR1Q9H583 2144 aaKnown RBP9.74□□□□□ -0.85
VCP-204ENST00000466100 A0A096LPE4 126 aa9.74□□□□□ -0.85
VCP-204ENST00000466100 ARPC4-TTLL3A0A0A6YYG9 625 aa9.74□□□□□ -0.85
VCP-204ENST00000466100 A0A1W2PPZ6 126 aa9.74□□□□□ -0.85
VCP-204ENST00000466100 OR5H1A6NKK0 313 aa9.74□□□□□ -0.85
VCP-204ENST00000466100 XPNPEP2O43895 674 aa9.74□□□□□ -0.85
VCP-204ENST00000466100 APOL3O95236 402 aa9.74□□□□□ -0.85
VCP-204ENST00000466100 ADRA2AP08913 450 aa9.74□□□□□ -0.85
VCP-204ENST00000466100 MRPL3P09001 348 aaKnown RBP9.74□□□□□ -0.85
VCP-204ENST00000466100 MMP7P09237 267 aaPredicted RBP9.74□□□□□ -0.85
VCP-204ENST00000466100 SBK2P0C263 348 aa9.74□□□□□ -0.85
VCP-204ENST00000466100 CCDC159P0C7I6 412 aa9.74□□□□□ -0.85
VCP-204ENST00000466100 OR8G3PP0DMU2 310 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms