RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 RASD2Q96D21 266 aa12.29□□□□□ -0.44
HDAC6-215ENST00000465457 Q96M85 177 aa12.29□□□□□ -0.44
HDAC6-215ENST00000465457 TSPAN32Q96QS1 320 aa12.29□□□□□ -0.44
HDAC6-215ENST00000465457 ZNF649Q9BS31 505 aa12.29□□□□□ -0.44
HDAC6-215ENST00000465457 WDR12Q9GZL7 423 aaKnown RBP12.29□□□□□ -0.44
HDAC6-215ENST00000465457 ZDHHC11Q9H8X9 412 aa12.29□□□□□ -0.44
HDAC6-215ENST00000465457 PLGRKTQ9HBL7 147 aa12.29□□□□□ -0.44
HDAC6-215ENST00000465457 HMG20AQ9NP66 347 aa12.29□□□□□ -0.44
HDAC6-215ENST00000465457 TAS2R5Q9NYW4 299 aa12.29□□□□□ -0.44
HDAC6-215ENST00000465457 VDAC3Q9Y277 283 aa12.29□□□□□ -0.44
HDAC6-215ENST00000465457 GSTK1Q9Y2Q3 226 aa12.29□□□□□ -0.44
HDAC6-215ENST00000465457 HDGFL3Q9Y3E1 203 aa12.29□□□□□ -0.44
HDAC6-215ENST00000465457 A0A1W2PNV4 684 aa12.28□□□□□ -0.44
HDAC6-215ENST00000465457 OR6C68A6NDL8 312 aa12.28□□□□□ -0.44
HDAC6-215ENST00000465457 C17orf51A8MQB3 221 aa12.28□□□□□ -0.44
HDAC6-215ENST00000465457 PHYHO14832 338 aa12.28□□□□□ -0.44
HDAC6-215ENST00000465457 P04436 131 aa12.28□□□□□ -0.44
HDAC6-215ENST00000465457 HLA-DPB1P04440 258 aa12.28□□□□□ -0.44
HDAC6-215ENST00000465457 F13BP05160 661 aa12.28□□□□□ -0.44
HDAC6-215ENST00000465457 FGF9P31371 208 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-215ENST00000465457 DSCR4P56555 118 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-215ENST00000465457 PUDPQ08623 228 aa12.28□□□□□ -0.44
HDAC6-215ENST00000465457 ZNF829Q3KNS6 432 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-215ENST00000465457 SLC25A35Q3KQZ1 300 aa12.28□□□□□ -0.44
HDAC6-215ENST00000465457 ZNF404Q494X3 552 aa12.28□□□□□ -0.44
HDAC6-215ENST00000465457 GLYR1Q49A26 553 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-215ENST00000465457 BICRALQ6AI39 1079 aa12.28□□□□□ -0.44
HDAC6-215ENST00000465457 OR5M10Q6IEU7 315 aa12.28□□□□□ -0.44
HDAC6-215ENST00000465457 DNM1P34Q6PK57 102 aa12.28□□□□□ -0.44
HDAC6-215ENST00000465457 CD200R1LQ6Q8B3 271 aa12.28□□□□□ -0.44
HDAC6-215ENST00000465457 SEM1Q6ZVN7 128 aa12.28□□□□□ -0.44
HDAC6-215ENST00000465457 SLC35F2Q8IXU6 374 aa12.28□□□□□ -0.44
HDAC6-215ENST00000465457 GTPBP8Q8N3Z3 284 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-215ENST00000465457 TMEM99Q8N816 258 aa12.28□□□□□ -0.44
HDAC6-215ENST00000465457 ATP6V1C2Q8NEY4 427 aa12.28□□□□□ -0.44
HDAC6-215ENST00000465457 ZNF417Q8TAU3 575 aa12.28□□□□□ -0.44
HDAC6-215ENST00000465457 SPRYD4Q8WW59 207 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-215ENST00000465457 BORCS5Q969J3 196 aa12.28□□□□□ -0.44
HDAC6-215ENST00000465457 ZNF587Q96SQ5 575 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-215ENST00000465457 TTTY12Q9BZ98 90 aa12.28□□□□□ -0.44
HDAC6-215ENST00000465457 SLIRPQ9GZT3 109 aaKnown RBP12.28□□□□□ -0.44
HDAC6-215ENST00000465457 KCNN2Q9H2S1 579 aa12.28□□□□□ -0.44
HDAC6-215ENST00000465457 EXOSC4Q9NPD3 245 aaKnown RBP12.28□□□□□ -0.44
HDAC6-215ENST00000465457 FKBP7Q9Y680 259 aa12.28□□□□□ -0.44
HDAC6-215ENST00000465457 TMEM14AQ9Y6G1 99 aa12.28□□□□□ -0.44
HDAC6-215ENST00000465457 TRDV1A0A1B0GX56 115 aa12.27□□□□□ -0.45
HDAC6-215ENST00000465457 C2orf72A6NCS6 295 aa12.27□□□□□ -0.45
HDAC6-215ENST00000465457 LIPT2A6NK58 231 aa12.27□□□□□ -0.45
HDAC6-215ENST00000465457 FIGNL2A6NMB9 653 aa12.27□□□□□ -0.45
HDAC6-215ENST00000465457 HSPB2A8KAH6 182 aa12.27□□□□□ -0.45
HDAC6-215ENST00000465457 CENPBD1B2RD01 187 aa12.27□□□□□ -0.45
HDAC6-215ENST00000465457 GPX5O75715 221 aa12.27□□□□□ -0.45
HDAC6-215ENST00000465457 CBR3O75828 277 aa12.27□□□□□ -0.45
HDAC6-215ENST00000465457 IL1AP01583 271 aa12.27□□□□□ -0.45
HDAC6-215ENST00000465457 TFPIP10646 304 aa12.27□□□□□ -0.45
HDAC6-215ENST00000465457 CDKN2AP42771 156 aaKnown RBP12.27□□□□□ -0.45
HDAC6-215ENST00000465457 CRYBB2P43320 205 aa12.27□□□□□ -0.45
HDAC6-215ENST00000465457 MAGEA5P43359 124 aa12.27□□□□□ -0.45
HDAC6-215ENST00000465457 PPIAP62937 165 aaKnown RBP12.27□□□□□ -0.45
HDAC6-215ENST00000465457 ZNF846Q147U1 533 aa12.27□□□□□ -0.45
HDAC6-215ENST00000465457 HSPB2Q16082 182 aa12.27□□□□□ -0.45
HDAC6-215ENST00000465457 MESTQ5EB52 335 aa12.27□□□□□ -0.45
HDAC6-215ENST00000465457 C1orf185Q5T7R7 199 aa12.27□□□□□ -0.45
HDAC6-215ENST00000465457 EEF1A1P5Q5VTE0 462 aa12.27□□□□□ -0.45
HDAC6-215ENST00000465457 SLC16A9Q7RTY1 509 aa12.27□□□□□ -0.45
HDAC6-215ENST00000465457 KCTD20Q7Z5Y7 419 aa12.27□□□□□ -0.45
HDAC6-215ENST00000465457 WDSUB1Q8N9V3 476 aa12.27□□□□□ -0.45
HDAC6-215ENST00000465457 OR1J4Q8NGS1 313 aa12.27□□□□□ -0.45
HDAC6-215ENST00000465457 OR6K6Q8NGW6 343 aa12.27□□□□□ -0.45
HDAC6-215ENST00000465457 MCFD2Q8NI22 146 aa12.27□□□□□ -0.45
HDAC6-215ENST00000465457 ZNF519Q8TB69 540 aa12.27□□□□□ -0.45
HDAC6-215ENST00000465457 FAM222BQ8WU58 562 aa12.27□□□□□ -0.45
HDAC6-215ENST00000465457 KCTD7Q96MP8 289 aa12.27□□□□□ -0.45
HDAC6-215ENST00000465457 DOCK7Q96N67 2140 aa12.27□□□□□ -0.45
HDAC6-215ENST00000465457 CENPOQ9BU64 300 aa12.27□□□□□ -0.45
HDAC6-215ENST00000465457 MED18Q9BUE0 208 aa12.27□□□□□ -0.45
HDAC6-215ENST00000465457 ALG12Q9BV10 488 aa12.27□□□□□ -0.45
HDAC6-215ENST00000465457 OR11A1Q9GZK7 315 aa12.27□□□□□ -0.45
HDAC6-215ENST00000465457 RPRD1BQ9NQG5 326 aaKnown RBP12.27□□□□□ -0.45
HDAC6-215ENST00000465457 VSX1Q9NZR4 365 aaPredicted RBP12.27□□□□□ -0.45
HDAC6-215ENST00000465457 EDARQ9UNE0 448 aa12.27□□□□□ -0.45
HDAC6-215ENST00000465457 PRSS37A4D1T9 235 aa12.26□□□□□ -0.45
HDAC6-215ENST00000465457 GJE1A6NN92 205 aa12.26□□□□□ -0.45
HDAC6-215ENST00000465457 CLDN25C9JDP6 229 aa12.26□□□□□ -0.45
HDAC6-215ENST00000465457 CD1AP06126 327 aa12.26□□□□□ -0.45
HDAC6-215ENST00000465457 MRPL3P09001 348 aaKnown RBP12.26□□□□□ -0.45
HDAC6-215ENST00000465457 CLUP10909 449 aa12.26□□□□□ -0.45
HDAC6-215ENST00000465457 BMP5P22003 454 aa12.26□□□□□ -0.45
HDAC6-215ENST00000465457 AHCYP23526 432 aa12.26□□□□□ -0.45
HDAC6-215ENST00000465457 CRABP1P29762 137 aa12.26□□□□□ -0.45
HDAC6-215ENST00000465457 ACVR1BP36896 505 aa12.26□□□□□ -0.45
HDAC6-215ENST00000465457 PLGLB1Q02325 96 aa12.26□□□□□ -0.45
HDAC6-215ENST00000465457 OR7A5Q15622 319 aa12.26□□□□□ -0.45
HDAC6-215ENST00000465457 ACKR1Q16570 336 aa12.26□□□□□ -0.45
HDAC6-215ENST00000465457 ZNF239Q16600 458 aaKnown RBP12.26□□□□□ -0.45
HDAC6-215ENST00000465457 CDONQ4KMG0 1287 aa12.26□□□□□ -0.45
HDAC6-215ENST00000465457 CCDC58Q4VC31 144 aa12.26□□□□□ -0.45
HDAC6-215ENST00000465457 PRAMEF20Q5VT98 475 aa12.26□□□□□ -0.45
HDAC6-215ENST00000465457 TIGD3Q6B0B8 471 aa12.26□□□□□ -0.45
HDAC6-215ENST00000465457 VASH1Q7L8A9 365 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms