RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 VAPAQ9P0L0 249 aa12.33□□□□□ -0.44
MCF2L-220ENST00000464800 GMEB1Q9Y692 573 aa12.33□□□□□ -0.44
MCF2L-220ENST00000464800 TRBV5-3A0A0A0MS03 114 aa12.32□□□□□ -0.44
MCF2L-220ENST00000464800 A0A1W2PRG6 482 aa12.32□□□□□ -0.44
MCF2L-220ENST00000464800 A8MXK9 166 aa12.32□□□□□ -0.44
MCF2L-220ENST00000464800 CENPBD1B2RD01 187 aa12.32□□□□□ -0.44
MCF2L-220ENST00000464800 TRAPPC2LH3BP13 241 aa12.32□□□□□ -0.44
MCF2L-220ENST00000464800 H3BSA7 217 aa12.32□□□□□ -0.44
MCF2L-220ENST00000464800 TGDSO95455 350 aa12.32□□□□□ -0.44
MCF2L-220ENST00000464800 ZNF32P17041 273 aa12.32□□□□□ -0.44
MCF2L-220ENST00000464800 GPX2P18283 190 aa12.32□□□□□ -0.44
MCF2L-220ENST00000464800 MDKP21741 143 aaPredicted RBP12.32□□□□□ -0.44
MCF2L-220ENST00000464800 MTNR1AP48039 350 aa12.32□□□□□ -0.44
MCF2L-220ENST00000464800 IDH3AP50213 366 aa12.32□□□□□ -0.44
MCF2L-220ENST00000464800 DAP3P51398 398 aaKnown RBP12.32□□□□□ -0.44
MCF2L-220ENST00000464800 SEC61A1P61619 476 aaKnown RBP12.32□□□□□ -0.44
MCF2L-220ENST00000464800 MRPS34P82930 218 aaKnown RBP12.32□□□□□ -0.44
MCF2L-220ENST00000464800 TNFAIP6P98066 277 aaPredicted RBP12.32□□□□□ -0.44
MCF2L-220ENST00000464800 TMEM155Q4W5P6 130 aa12.32□□□□□ -0.44
MCF2L-220ENST00000464800 SPRNQ5BIV9 151 aa12.32□□□□□ -0.44
MCF2L-220ENST00000464800 ENTPD8Q5MY95 495 aa12.32□□□□□ -0.44
MCF2L-220ENST00000464800 C10orf128Q5T292 105 aa12.32□□□□□ -0.44
MCF2L-220ENST00000464800 C1orf174Q8IYL3 243 aa12.32□□□□□ -0.44
MCF2L-220ENST00000464800 ADAMTS16Q8TE57 1224 aa12.32□□□□□ -0.44
MCF2L-220ENST00000464800 ASB10Q8WXI3 467 aa12.32□□□□□ -0.44
MCF2L-220ENST00000464800 TAF15Q92804 592 aaKnown RBP eCLIP12.32□□□□□ -0.44
MCF2L-220ENST00000464800 SEPHS2Q99611 448 aa12.32□□□□□ -0.44
MCF2L-220ENST00000464800 MRPL13Q9BYD1 178 aaKnown RBP12.32□□□□□ -0.44
MCF2L-220ENST00000464800 SIAEQ9HAT2 523 aa12.32□□□□□ -0.44
MCF2L-220ENST00000464800 PATZ1Q9HBE1 687 aaKnown RBP12.32□□□□□ -0.44
MCF2L-220ENST00000464800 TMBIM4Q9HC24 238 aa12.32□□□□□ -0.44
MCF2L-220ENST00000464800 MSL2Q9HCI7 577 aa12.32□□□□□ -0.44
MCF2L-220ENST00000464800 TMEM106BQ9NUM4 274 aa12.32□□□□□ -0.44
MCF2L-220ENST00000464800 DCAF16Q9NXF7 216 aa12.32□□□□□ -0.44
MCF2L-220ENST00000464800 OR5V1Q9UGF6 321 aa12.32□□□□□ -0.44
MCF2L-220ENST00000464800 EGFL7Q9UHF1 273 aa12.32□□□□□ -0.44
MCF2L-220ENST00000464800 SLC7A7Q9UM01 511 aa12.32□□□□□ -0.44
MCF2L-220ENST00000464800 TRRAPQ9Y4A5 3859 aa12.32□□□□□ -0.44
MCF2L-220ENST00000464800 VWFP04275 2813 aa12.32□□□□□ -0.44
MCF2L-220ENST00000464800 LOC100509620A0A075B734 347 aa12.31□□□□□ -0.44
MCF2L-220ENST00000464800 EVPLLA8MZ36 301 aa12.31□□□□□ -0.44
MCF2L-220ENST00000464800 BLOC1S5-TXNDC5H3BN57 136 aa12.31□□□□□ -0.44
MCF2L-220ENST00000464800 LYPD3O95274 346 aa12.31□□□□□ -0.44
MCF2L-220ENST00000464800 SLC2A10O95528 541 aa12.31□□□□□ -0.44
MCF2L-220ENST00000464800 VIMP08670 466 aaKnown RBP12.31□□□□□ -0.44
MCF2L-220ENST00000464800 ACADSP16219 412 aa12.31□□□□□ -0.44
MCF2L-220ENST00000464800 CDAP32320 146 aa12.31□□□□□ -0.44
MCF2L-220ENST00000464800 SLC6A9P48067 706 aa12.31□□□□□ -0.44
MCF2L-220ENST00000464800 ZNF133P52736 654 aaPredicted RBP12.31□□□□□ -0.44
MCF2L-220ENST00000464800 PPP1CBP62140 327 aa12.31□□□□□ -0.44
MCF2L-220ENST00000464800 BTG1P62324 171 aa12.31□□□□□ -0.44
MCF2L-220ENST00000464800 HNRNPA0Q13151 305 aaKnown RBP12.31□□□□□ -0.44
MCF2L-220ENST00000464800 NPTX1Q15818 432 aa12.31□□□□□ -0.44
MCF2L-220ENST00000464800 OCLNQ16625 522 aa12.31□□□□□ -0.44
MCF2L-220ENST00000464800 ESCO2Q56NI9 601 aa12.31□□□□□ -0.44
MCF2L-220ENST00000464800 SPATC1Q76KD6 591 aa12.31□□□□□ -0.44
MCF2L-220ENST00000464800 PARP8Q8N3A8 854 aa12.31□□□□□ -0.44
MCF2L-220ENST00000464800 OR6T1Q8NGN1 323 aa12.31□□□□□ -0.44
MCF2L-220ENST00000464800 AKR7LQ8NHP1 331 aa12.31□□□□□ -0.44
MCF2L-220ENST00000464800 MPP4Q96JB8 637 aa12.31□□□□□ -0.44
MCF2L-220ENST00000464800 C7orf26Q96N11 449 aa12.31□□□□□ -0.44
MCF2L-220ENST00000464800 EBF4Q9BQW3 602 aa12.31□□□□□ -0.44
MCF2L-220ENST00000464800 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.31□□□□□ -0.44
MCF2L-220ENST00000464800 TRAPPC13A5PLN9 417 aa12.3□□□□□ -0.44
MCF2L-220ENST00000464800 TIMM8AO60220 97 aaPredicted RBP12.3□□□□□ -0.44
MCF2L-220ENST00000464800 TRMUO75648 421 aaKnown RBP12.3□□□□□ -0.44
MCF2L-220ENST00000464800 OPN1SWP03999 348 aa12.3□□□□□ -0.44
MCF2L-220ENST00000464800 THY1P04216 161 aa12.3□□□□□ -0.44
MCF2L-220ENST00000464800 F13BP05160 661 aa12.3□□□□□ -0.44
MCF2L-220ENST00000464800 TNFSF4P23510 183 aa12.3□□□□□ -0.44
MCF2L-220ENST00000464800 ARHGDIAP52565 204 aa12.3□□□□□ -0.44
MCF2L-220ENST00000464800 UGT2B15P54855 530 aa12.3□□□□□ -0.44
MCF2L-220ENST00000464800 ERVK-25P63136 954 aa12.3□□□□□ -0.44
MCF2L-220ENST00000464800 RPL18Q07020 188 aaKnown RBP12.3□□□□□ -0.44
MCF2L-220ENST00000464800 MTX3Q5HYI7 312 aa12.3□□□□□ -0.44
MCF2L-220ENST00000464800 C9orf139Q6ZV77 190 aa12.3□□□□□ -0.44
MCF2L-220ENST00000464800 ZER1Q7Z7L7 766 aa12.3□□□□□ -0.44
MCF2L-220ENST00000464800 OR52E2Q8NGJ4 325 aa12.3□□□□□ -0.44
MCF2L-220ENST00000464800 VANGL1Q8TAA9 524 aaPredicted RBP12.3□□□□□ -0.44
MCF2L-220ENST00000464800 NABP1Q96AH0 204 aa12.3□□□□□ -0.44
MCF2L-220ENST00000464800 TMIGD2Q96BF3 282 aa12.3□□□□□ -0.44
MCF2L-220ENST00000464800 CCDC28BQ9BUN5 200 aa12.3□□□□□ -0.44
MCF2L-220ENST00000464800 ZNF426Q9BUY5 554 aa12.3□□□□□ -0.44
MCF2L-220ENST00000464800 SMURF2Q9HAU4 748 aa12.3□□□□□ -0.44
MCF2L-220ENST00000464800 STX18Q9P2W9 335 aaKnown RBP12.3□□□□□ -0.44
MCF2L-220ENST00000464800 KLHL21Q9UJP4 597 aa12.3□□□□□ -0.44
MCF2L-220ENST00000464800 UGT2A1Q9Y4X1 527 aa12.3□□□□□ -0.44
MCF2L-220ENST00000464800 MMP24Q9Y5R2 645 aa12.3□□□□□ -0.44
MCF2L-220ENST00000464800 IGHV3OR16-10A0A075B7F0 116 aa12.29□□□□□ -0.44
MCF2L-220ENST00000464800 GMNCA6NCL1 334 aa12.29□□□□□ -0.44
MCF2L-220ENST00000464800 F5H0A9 414 aaPredicted RBP12.29□□□□□ -0.44
MCF2L-220ENST00000464800 ICMTO60725 284 aa12.29□□□□□ -0.44
MCF2L-220ENST00000464800 GPANK1O95872 356 aa12.29□□□□□ -0.44
MCF2L-220ENST00000464800 KNG1P01042 644 aa12.29□□□□□ -0.44
MCF2L-220ENST00000464800 IGHV4-38-2P0DP08 117 aa12.29□□□□□ -0.44
MCF2L-220ENST00000464800 NR2C1P13056 603 aa12.29□□□□□ -0.44
MCF2L-220ENST00000464800 TNFRSF1AP19438 455 aa12.29□□□□□ -0.44
MCF2L-220ENST00000464800 OMGP23515 440 aa12.29□□□□□ -0.44
MCF2L-220ENST00000464800 PCGF2P35227 344 aa12.29□□□□□ -0.44
MCF2L-220ENST00000464800 PCBP3P57721 371 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms