RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 ZFP1Q6P2D0 407 aa12.6□□□□□ -0.39
SQSTM1-205ENST00000464493 DNM1P34Q6PK57 102 aa12.6□□□□□ -0.39
SQSTM1-205ENST00000464493 ZDHHC13Q8IUH4 622 aa12.6□□□□□ -0.39
SQSTM1-205ENST00000464493 GLB1L2Q8IW92 636 aa12.6□□□□□ -0.39
SQSTM1-205ENST00000464493 OR6V1Q8N148 313 aa12.6□□□□□ -0.39
SQSTM1-205ENST00000464493 NPEPL1Q8NDH3 523 aa12.6□□□□□ -0.39
SQSTM1-205ENST00000464493 OR4Q3Q8NH05 313 aa12.6□□□□□ -0.39
SQSTM1-205ENST00000464493 SMAP2Q8WU79 429 aaPredicted RBP12.6□□□□□ -0.39
SQSTM1-205ENST00000464493 DNAJC9Q8WXX5 260 aa12.6□□□□□ -0.39
SQSTM1-205ENST00000464493 PIGTQ969N2 578 aa12.6□□□□□ -0.39
SQSTM1-205ENST00000464493 FBXO17Q96EF6 278 aa12.6□□□□□ -0.39
SQSTM1-205ENST00000464493 CENPNQ96H22 339 aaPredicted RBP12.6□□□□□ -0.39
SQSTM1-205ENST00000464493 MS4A3Q96HJ5 214 aa12.6□□□□□ -0.39
SQSTM1-205ENST00000464493 FOXN4Q96NZ1 517 aa12.6□□□□□ -0.39
SQSTM1-205ENST00000464493 TSSK2Q96PF2 358 aa12.6□□□□□ -0.39
SQSTM1-205ENST00000464493 CCL19Q99731 98 aa12.6□□□□□ -0.39
SQSTM1-205ENST00000464493 SEMA6AQ9H2E6 1030 aa12.6□□□□□ -0.39
SQSTM1-205ENST00000464493 CCNB1IP1Q9NPC3 277 aa12.6□□□□□ -0.39
SQSTM1-205ENST00000464493 RPRD1BQ9NQG5 326 aaKnown RBP12.6□□□□□ -0.39
SQSTM1-205ENST00000464493 POLE4Q9NR33 117 aa12.6□□□□□ -0.39
SQSTM1-205ENST00000464493 KIF17Q9P2E2 1029 aa12.6□□□□□ -0.39
SQSTM1-205ENST00000464493 B9D1Q9UPM9 204 aa12.6□□□□□ -0.39
SQSTM1-205ENST00000464493 DCTN6O00399 190 aa12.59□□□□□ -0.39
SQSTM1-205ENST00000464493 SCG5P05408 212 aa12.59□□□□□ -0.39
SQSTM1-205ENST00000464493 CST2P09228 141 aa12.59□□□□□ -0.39
SQSTM1-205ENST00000464493 MMP7P09237 267 aaPredicted RBP12.59□□□□□ -0.39
SQSTM1-205ENST00000464493 ZNF23P17027 643 aa12.59□□□□□ -0.39
SQSTM1-205ENST00000464493 MSR1P21757 451 aa12.59□□□□□ -0.39
SQSTM1-205ENST00000464493 CENPAP49450 140 aa12.59□□□□□ -0.39
SQSTM1-205ENST00000464493 DAPP51397 102 aa12.59□□□□□ -0.39
SQSTM1-205ENST00000464493 PCBD1P61457 104 aa12.59□□□□□ -0.39
SQSTM1-205ENST00000464493 ZSCAN26Q16670 478 aa12.59□□□□□ -0.39
SQSTM1-205ENST00000464493 ZNF362Q5T0B9 420 aaPredicted RBP12.59□□□□□ -0.39
SQSTM1-205ENST00000464493 FAHD1Q6P587 224 aa12.59□□□□□ -0.39
SQSTM1-205ENST00000464493 B3GLCTQ6Y288 498 aa12.59□□□□□ -0.39
SQSTM1-205ENST00000464493 ZNF584Q8IVC4 421 aa12.59□□□□□ -0.39
SQSTM1-205ENST00000464493 SVOPLQ8N434 492 aa12.59□□□□□ -0.39
SQSTM1-205ENST00000464493 OR4F15Q8NGB8 312 aa12.59□□□□□ -0.39
SQSTM1-205ENST00000464493 MBD6Q96DN6 1003 aa12.59□□□□□ -0.39
SQSTM1-205ENST00000464493 DDOQ99489 341 aa12.59□□□□□ -0.39
SQSTM1-205ENST00000464493 DHRS9Q9BPW9 319 aa12.59□□□□□ -0.39
SQSTM1-205ENST00000464493 ZNF416Q9BWM5 594 aa12.59□□□□□ -0.39
SQSTM1-205ENST00000464493 PAPOLBQ9NRJ5 636 aaKnown RBP12.59□□□□□ -0.39
SQSTM1-205ENST00000464493 KLHL21Q9UJP4 597 aa12.59□□□□□ -0.39
SQSTM1-205ENST00000464493 ITGB1BP2Q9UKP3 347 aa12.59□□□□□ -0.39
SQSTM1-205ENST00000464493 IGLV1-36A0A0B4J1U3 117 aa12.58□□□□□ -0.4
SQSTM1-205ENST00000464493 IGHV2OR16-5A0A0B4J2B6 119 aa12.58□□□□□ -0.4
SQSTM1-205ENST00000464493 IQCMA0A1B0GVH7 501 aa12.58□□□□□ -0.4
SQSTM1-205ENST00000464493 C12orf71A8MTZ7 269 aa12.58□□□□□ -0.4
SQSTM1-205ENST00000464493 H3BNX3 289 aa12.58□□□□□ -0.4
SQSTM1-205ENST00000464493 MPZL1O95297 269 aa12.58□□□□□ -0.4
SQSTM1-205ENST00000464493 PTHP01270 115 aa12.58□□□□□ -0.4
SQSTM1-205ENST00000464493 IFNGP01579 166 aa12.58□□□□□ -0.4
SQSTM1-205ENST00000464493 DANCRP0C864 163 aa12.58□□□□□ -0.4
SQSTM1-205ENST00000464493 ZNF35P13682 527 aa12.58□□□□□ -0.4
SQSTM1-205ENST00000464493 ZNF32P17041 273 aa12.58□□□□□ -0.4
SQSTM1-205ENST00000464493 FABP6P51161 128 aa12.58□□□□□ -0.4
SQSTM1-205ENST00000464493 HSF2Q03933 536 aa12.58□□□□□ -0.4
SQSTM1-205ENST00000464493 PLP2Q04941 152 aa12.58□□□□□ -0.4
SQSTM1-205ENST00000464493 ENDOGQ14249 297 aaKnown RBP12.58□□□□□ -0.4
SQSTM1-205ENST00000464493 GINS1Q14691 196 aa12.58□□□□□ -0.4
SQSTM1-205ENST00000464493 PGGHGQ32M88 737 aa12.58□□□□□ -0.4
SQSTM1-205ENST00000464493 SLC27A4Q6P1M0 643 aa12.58□□□□□ -0.4
SQSTM1-205ENST00000464493 UGT2A3Q6UWM9 527 aa12.58□□□□□ -0.4
SQSTM1-205ENST00000464493 SYT9Q86SS6 491 aa12.58□□□□□ -0.4
SQSTM1-205ENST00000464493 ZBTB46Q86UZ6 589 aa12.58□□□□□ -0.4
SQSTM1-205ENST00000464493 IQCF1Q8N6M8 205 aa12.58□□□□□ -0.4
SQSTM1-205ENST00000464493 CYB561A3Q8NBI2 242 aa12.58□□□□□ -0.4
SQSTM1-205ENST00000464493 SLC37A3Q8NCC5 494 aa12.58□□□□□ -0.4
SQSTM1-205ENST00000464493 PKP2Q99959 881 aa12.58□□□□□ -0.4
SQSTM1-205ENST00000464493 WACQ9BTA9 647 aa12.58□□□□□ -0.4
SQSTM1-205ENST00000464493 RACGAP1Q9H0H5 632 aa12.58□□□□□ -0.4
SQSTM1-205ENST00000464493 FN3KQ9H479 309 aa12.58□□□□□ -0.4
SQSTM1-205ENST00000464493 EMC7Q9NPA0 242 aa12.58□□□□□ -0.4
SQSTM1-205ENST00000464493 FAIMQ9NVQ4 179 aa12.58□□□□□ -0.4
SQSTM1-205ENST00000464493 LAMP3Q9UQV4 416 aa12.58□□□□□ -0.4
SQSTM1-205ENST00000464493 TIMM10BQ9Y5J6 103 aa12.58□□□□□ -0.4
SQSTM1-205ENST00000464493 FKBP7Q9Y680 259 aa12.58□□□□□ -0.4
SQSTM1-205ENST00000464493 MYO9AB2RTY4 2548 aa12.58□□□□□ -0.4
SQSTM1-205ENST00000464493 SOD3P08294 240 aa12.57□□□□□ -0.4
SQSTM1-205ENST00000464493 APOBEC3AP31941 199 aaPredicted RBP12.57□□□□□ -0.4
SQSTM1-205ENST00000464493 TTKP33981 857 aa12.57□□□□□ -0.4
SQSTM1-205ENST00000464493 GRK5P34947 590 aa12.57□□□□□ -0.4
SQSTM1-205ENST00000464493 LSM6P62312 80 aaKnown RBP12.57□□□□□ -0.4
SQSTM1-205ENST00000464493 CDK5Q00535 292 aa12.57□□□□□ -0.4
SQSTM1-205ENST00000464493 PSG4Q00888 419 aa12.57□□□□□ -0.4
SQSTM1-205ENST00000464493 HGFACQ04756 655 aa12.57□□□□□ -0.4
SQSTM1-205ENST00000464493 GLO1Q04760 184 aa12.57□□□□□ -0.4
SQSTM1-205ENST00000464493 KCNMB1Q16558 191 aa12.57□□□□□ -0.4
SQSTM1-205ENST00000464493 DEFB113Q30KQ7 82 aa12.57□□□□□ -0.4
SQSTM1-205ENST00000464493 PABPC1L2AQ5JQF8 200 aa12.57□□□□□ -0.4
SQSTM1-205ENST00000464493 ACSM5Q6NUN0 579 aa12.57□□□□□ -0.4
SQSTM1-205ENST00000464493 ZNF544Q6NX49 715 aa12.57□□□□□ -0.4
SQSTM1-205ENST00000464493 ALDH16A1Q8IZ83 802 aa12.57□□□□□ -0.4
SQSTM1-205ENST00000464493 PARP8Q8N3A8 854 aa12.57□□□□□ -0.4
SQSTM1-205ENST00000464493 CPEB3Q8NE35 698 aaKnown RBP12.57□□□□□ -0.4
SQSTM1-205ENST00000464493 SLC30A7Q8NEW0 376 aa12.57□□□□□ -0.4
SQSTM1-205ENST00000464493 NUP37Q8NFH4 326 aa12.57□□□□□ -0.4
SQSTM1-205ENST00000464493 TMEM171Q8WVE6 324 aa12.57□□□□□ -0.4
SQSTM1-205ENST00000464493 IGFBPL1Q8WX77 278 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms