RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 MSR1P21757 451 aa13.35□□□□□ -0.27
RAB11FIP3-208ENST00000464263 CRABP1P29762 137 aa13.35□□□□□ -0.27
RAB11FIP3-208ENST00000464263 GUCA1AP43080 201 aaPredicted RBP13.35□□□□□ -0.27
RAB11FIP3-208ENST00000464263 HGFACQ04756 655 aa13.35□□□□□ -0.27
RAB11FIP3-208ENST00000464263 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.35□□□□□ -0.27
RAB11FIP3-208ENST00000464263 ENDOGQ14249 297 aaKnown RBP13.35□□□□□ -0.27
RAB11FIP3-208ENST00000464263 TESK1Q15569 626 aa13.35□□□□□ -0.27
RAB11FIP3-208ENST00000464263 DEFB113Q30KQ7 82 aa13.35□□□□□ -0.27
RAB11FIP3-208ENST00000464263 TMEM53Q6P2H8 277 aa13.35□□□□□ -0.27
RAB11FIP3-208ENST00000464263 FAHD1Q6P587 224 aa13.35□□□□□ -0.27
RAB11FIP3-208ENST00000464263 UGT2A3Q6UWM9 527 aa13.35□□□□□ -0.27
RAB11FIP3-208ENST00000464263 ZBTB46Q86UZ6 589 aa13.35□□□□□ -0.27
RAB11FIP3-208ENST00000464263 JAZF1Q86VZ6 243 aa13.35□□□□□ -0.27
RAB11FIP3-208ENST00000464263 GLB1L2Q8IW92 636 aa13.35□□□□□ -0.27
RAB11FIP3-208ENST00000464263 SDR9C7Q8NEX9 313 aa13.35□□□□□ -0.27
RAB11FIP3-208ENST00000464263 FOXN4Q96NZ1 517 aa13.35□□□□□ -0.27
RAB11FIP3-208ENST00000464263 CCL19Q99731 98 aa13.35□□□□□ -0.27
RAB11FIP3-208ENST00000464263 FOXC2Q99958 501 aa13.35□□□□□ -0.27
RAB11FIP3-208ENST00000464263 DHRS9Q9BPW9 319 aa13.35□□□□□ -0.27
RAB11FIP3-208ENST00000464263 BDH2Q9BUT1 245 aa13.35□□□□□ -0.27
RAB11FIP3-208ENST00000464263 KCNN2Q9H2S1 579 aa13.35□□□□□ -0.27
RAB11FIP3-208ENST00000464263 ZNF556Q9HAH1 456 aa13.35□□□□□ -0.27
RAB11FIP3-208ENST00000464263 SRA1Q9HD15 236 aaKnown RBP13.35□□□□□ -0.27
RAB11FIP3-208ENST00000464263 BEX4Q9NWD9 120 aaPredicted RBP13.35□□□□□ -0.27
RAB11FIP3-208ENST00000464263 FBXL3Q9UKT7 428 aa13.35□□□□□ -0.27
RAB11FIP3-208ENST00000464263 BAIAP2Q9UQB8 552 aa13.35□□□□□ -0.27
RAB11FIP3-208ENST00000464263 IGLV1-36A0A0B4J1U3 117 aa13.34□□□□□ -0.27
RAB11FIP3-208ENST00000464263 OVOL3O00110 214 aa13.34□□□□□ -0.27
RAB11FIP3-208ENST00000464263 MPZL1O95297 269 aa13.34□□□□□ -0.27
RAB11FIP3-208ENST00000464263 OSMP13725 252 aa13.34□□□□□ -0.27
RAB11FIP3-208ENST00000464263 ZNF32P17041 273 aa13.34□□□□□ -0.27
RAB11FIP3-208ENST00000464263 DAPP51397 102 aa13.34□□□□□ -0.27
RAB11FIP3-208ENST00000464263 PSG4Q00888 419 aa13.34□□□□□ -0.27
RAB11FIP3-208ENST00000464263 DBPQ10586 325 aaPredicted RBP13.34□□□□□ -0.27
RAB11FIP3-208ENST00000464263 KCNMB1Q16558 191 aa13.34□□□□□ -0.27
RAB11FIP3-208ENST00000464263 SLC36A3Q495N2 470 aa13.34□□□□□ -0.27
RAB11FIP3-208ENST00000464263 SYT9Q86SS6 491 aa13.34□□□□□ -0.27
RAB11FIP3-208ENST00000464263 DTX2Q86UW9 622 aa13.34□□□□□ -0.27
RAB11FIP3-208ENST00000464263 HIPK1Q86Z02 1210 aa13.34□□□□□ -0.27
RAB11FIP3-208ENST00000464263 CPEB3Q8NE35 698 aaKnown RBP13.34□□□□□ -0.27
RAB11FIP3-208ENST00000464263 OR2T33Q8NG76 320 aa13.34□□□□□ -0.27
RAB11FIP3-208ENST00000464263 OR4F15Q8NGB8 312 aa13.34□□□□□ -0.27
RAB11FIP3-208ENST00000464263 PYDC1Q8WXC3 89 aa13.34□□□□□ -0.27
RAB11FIP3-208ENST00000464263 RAB3IPQ96QF0 476 aaPredicted RBP13.34□□□□□ -0.27
RAB11FIP3-208ENST00000464263 KCNS3Q9BQ31 491 aa13.34□□□□□ -0.27
RAB11FIP3-208ENST00000464263 ZNF416Q9BWM5 594 aa13.34□□□□□ -0.27
RAB11FIP3-208ENST00000464263 GRIP2Q9C0E4 1043 aa13.34□□□□□ -0.27
RAB11FIP3-208ENST00000464263 CXXC4Q9H2H0 198 aa13.34□□□□□ -0.27
RAB11FIP3-208ENST00000464263 RERGLQ9H628 205 aa13.34□□□□□ -0.27
RAB11FIP3-208ENST00000464263 CCNB1IP1Q9NPC3 277 aa13.34□□□□□ -0.27
RAB11FIP3-208ENST00000464263 LAMP3Q9UQV4 416 aa13.34□□□□□ -0.27
RAB11FIP3-208ENST00000464263 FKBP7Q9Y680 259 aa13.34□□□□□ -0.27
RAB11FIP3-208ENST00000464263 PRRC2AP48634 2157 aaKnown RBP13.33□□□□□ -0.28
RAB11FIP3-208ENST00000464263 G3V2T6 193 aa13.33□□□□□ -0.28
RAB11FIP3-208ENST00000464263 H3BN98 237 aa13.33□□□□□ -0.28
RAB11FIP3-208ENST00000464263 H3BNX3 289 aa13.33□□□□□ -0.28
RAB11FIP3-208ENST00000464263 TMCC2O75069 709 aa13.33□□□□□ -0.28
RAB11FIP3-208ENST00000464263 APOBEC3AP31941 199 aaPredicted RBP13.33□□□□□ -0.28
RAB11FIP3-208ENST00000464263 TTKP33981 857 aa13.33□□□□□ -0.28
RAB11FIP3-208ENST00000464263 FABP6P51161 128 aa13.33□□□□□ -0.28
RAB11FIP3-208ENST00000464263 ART1P52961 327 aa13.33□□□□□ -0.28
RAB11FIP3-208ENST00000464263 CDK5Q00535 292 aa13.33□□□□□ -0.28
RAB11FIP3-208ENST00000464263 PABPC1L2AQ5JQF8 200 aa13.33□□□□□ -0.28
RAB11FIP3-208ENST00000464263 ZNF544Q6NX49 715 aa13.33□□□□□ -0.28
RAB11FIP3-208ENST00000464263 DNM1P34Q6PK57 102 aa13.33□□□□□ -0.28
RAB11FIP3-208ENST00000464263 ATG16L2Q8NAA4 619 aa13.33□□□□□ -0.28
RAB11FIP3-208ENST00000464263 SLC37A3Q8NCC5 494 aa13.33□□□□□ -0.28
RAB11FIP3-208ENST00000464263 NUP37Q8NFH4 326 aa13.33□□□□□ -0.28
RAB11FIP3-208ENST00000464263 TEX47Q8TBZ9 253 aa13.33□□□□□ -0.28
RAB11FIP3-208ENST00000464263 CENPNQ96H22 339 aaPredicted RBP13.33□□□□□ -0.28
RAB11FIP3-208ENST00000464263 WACQ9BTA9 647 aa13.33□□□□□ -0.28
RAB11FIP3-208ENST00000464263 TRAF4Q9BUZ4 470 aaPredicted RBP13.33□□□□□ -0.28
RAB11FIP3-208ENST00000464263 RACGAP1Q9H0H5 632 aa13.33□□□□□ -0.28
RAB11FIP3-208ENST00000464263 FN3KQ9H479 309 aa13.33□□□□□ -0.28
RAB11FIP3-208ENST00000464263 EMC7Q9NPA0 242 aa13.33□□□□□ -0.28
RAB11FIP3-208ENST00000464263 RPRD1BQ9NQG5 326 aaKnown RBP13.33□□□□□ -0.28
RAB11FIP3-208ENST00000464263 TIMM10BQ9Y5J6 103 aa13.33□□□□□ -0.28
RAB11FIP3-208ENST00000464263 OTOGQ6ZRI0 2925 aa13.32□□□□□ -0.28
RAB11FIP3-208ENST00000464263 MYO9AB2RTY4 2548 aa13.32□□□□□ -0.28
RAB11FIP3-208ENST00000464263 C12orf71A8MTZ7 269 aa13.32□□□□□ -0.28
RAB11FIP3-208ENST00000464263 GPANK1O95872 356 aa13.32□□□□□ -0.28
RAB11FIP3-208ENST00000464263 PTHP01270 115 aa13.32□□□□□ -0.28
RAB11FIP3-208ENST00000464263 GAAP10253 952 aa13.32□□□□□ -0.28
RAB11FIP3-208ENST00000464263 PAX1P15863 534 aa13.32□□□□□ -0.28
RAB11FIP3-208ENST00000464263 NR4A1P22736 598 aa13.32□□□□□ -0.28
RAB11FIP3-208ENST00000464263 GRK5P34947 590 aa13.32□□□□□ -0.28
RAB11FIP3-208ENST00000464263 PCBD1P61457 104 aa13.32□□□□□ -0.28
RAB11FIP3-208ENST00000464263 LSM6P62312 80 aaKnown RBP13.32□□□□□ -0.28
RAB11FIP3-208ENST00000464263 NKX6-1P78426 367 aaPredicted RBP13.32□□□□□ -0.28
RAB11FIP3-208ENST00000464263 PLP2Q04941 152 aa13.32□□□□□ -0.28
RAB11FIP3-208ENST00000464263 GINS1Q14691 196 aa13.32□□□□□ -0.28
RAB11FIP3-208ENST00000464263 MST1LQ2TV78 715 aa13.32□□□□□ -0.28
RAB11FIP3-208ENST00000464263 AGAP6Q5VW22 663 aa13.32□□□□□ -0.28
RAB11FIP3-208ENST00000464263 OTPQ5XKR4 325 aa13.32□□□□□ -0.28
RAB11FIP3-208ENST00000464263 ACSM5Q6NUN0 579 aa13.32□□□□□ -0.28
RAB11FIP3-208ENST00000464263 ZFP1Q6P2D0 407 aa13.32□□□□□ -0.28
RAB11FIP3-208ENST00000464263 ZDHHC13Q8IUH4 622 aa13.32□□□□□ -0.28
RAB11FIP3-208ENST00000464263 IQCF1Q8N6M8 205 aa13.32□□□□□ -0.28
RAB11FIP3-208ENST00000464263 CYB561A3Q8NBI2 242 aa13.32□□□□□ -0.28
RAB11FIP3-208ENST00000464263 SLC30A7Q8NEW0 376 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms