RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 SRRM5B3KS81 715 aa12.16□□□□□ -0.46
SMC1A-204ENST00000463684 MCIDASD6RGH6 385 aa12.16□□□□□ -0.46
SMC1A-204ENST00000463684 F5H0A9 414 aaPredicted RBP12.16□□□□□ -0.46
SMC1A-204ENST00000463684 HDAC3O15379 428 aa12.16□□□□□ -0.46
SMC1A-204ENST00000463684 TPST2O60704 377 aa12.16□□□□□ -0.46
SMC1A-204ENST00000463684 SERPINB7O75635 380 aa12.16□□□□□ -0.46
SMC1A-204ENST00000463684 NGFP01138 241 aa12.16□□□□□ -0.46
SMC1A-204ENST00000463684 UMPSP11172 480 aa12.16□□□□□ -0.46
SMC1A-204ENST00000463684 MDH2P40926 338 aaKnown RBP12.16□□□□□ -0.46
SMC1A-204ENST00000463684 ARHGDIAP52565 204 aa12.16□□□□□ -0.46
SMC1A-204ENST00000463684 CDK5R2Q13319 367 aa12.16□□□□□ -0.46
SMC1A-204ENST00000463684 ZMYND11Q15326 602 aa12.16□□□□□ -0.46
SMC1A-204ENST00000463684 MTX3Q5HYI7 312 aa12.16□□□□□ -0.46
SMC1A-204ENST00000463684 FAM205BPQ63HN1 556 aa12.16□□□□□ -0.46
SMC1A-204ENST00000463684 ZNF613Q6PF04 617 aa12.16□□□□□ -0.46
SMC1A-204ENST00000463684 FIP1L1Q6UN15 594 aaKnown RBP12.16□□□□□ -0.46
SMC1A-204ENST00000463684 LINC00114Q6XXX2 140 aa12.16□□□□□ -0.46
SMC1A-204ENST00000463684 ARMC8Q8IUR7 673 aa12.16□□□□□ -0.46
SMC1A-204ENST00000463684 ALDH16A1Q8IZ83 802 aa12.16□□□□□ -0.46
SMC1A-204ENST00000463684 MUC20Q8N307 709 aaPredicted RBP12.16□□□□□ -0.46
SMC1A-204ENST00000463684 ZNF283Q8N7M2 679 aa12.16□□□□□ -0.46
SMC1A-204ENST00000463684 GOLGA6L1Q8N7Z2 621 aa12.16□□□□□ -0.46
SMC1A-204ENST00000463684 GTF2H4Q92759 462 aa12.16□□□□□ -0.46
SMC1A-204ENST00000463684 UPRTQ96BW1 309 aa12.16□□□□□ -0.46
SMC1A-204ENST00000463684 THOC1Q96FV9 657 aaKnown RBP12.16□□□□□ -0.46
SMC1A-204ENST00000463684 MCHR1Q99705 422 aa12.16□□□□□ -0.46
SMC1A-204ENST00000463684 ARHGDIGQ99819 225 aa12.16□□□□□ -0.46
SMC1A-204ENST00000463684 RBM4BQ9BQ04 359 aaKnown RBP12.16□□□□□ -0.46
SMC1A-204ENST00000463684 PAIP1Q9H074 479 aaKnown RBP12.16□□□□□ -0.46
SMC1A-204ENST00000463684 ELOVL3Q9HB03 270 aa12.16□□□□□ -0.46
SMC1A-204ENST00000463684 SLCO1B3Q9NPD5 702 aa12.16□□□□□ -0.46
SMC1A-204ENST00000463684 CMYA5Q8N3K9 4069 aa12.16□□□□□ -0.46
SMC1A-204ENST00000463684 TRAV40A0A0B4J280 105 aa12.15□□□□□ -0.46
SMC1A-204ENST00000463684 A0A1W2PRG6 482 aa12.15□□□□□ -0.46
SMC1A-204ENST00000463684 BLOC1S5-TXNDC5H3BN57 136 aa12.15□□□□□ -0.46
SMC1A-204ENST00000463684 CHP2O43745 196 aa12.15□□□□□ -0.46
SMC1A-204ENST00000463684 FMO6PO60774 539 aa12.15□□□□□ -0.46
SMC1A-204ENST00000463684 ALX3O95076 343 aa12.15□□□□□ -0.46
SMC1A-204ENST00000463684 NDUFA7O95182 113 aa12.15□□□□□ -0.46
SMC1A-204ENST00000463684 ZNF32P17041 273 aa12.15□□□□□ -0.46
SMC1A-204ENST00000463684 CPT2P23786 658 aa12.15□□□□□ -0.46
SMC1A-204ENST00000463684 SLC6A2P23975 617 aa12.15□□□□□ -0.46
SMC1A-204ENST00000463684 MRPS34P82930 218 aaKnown RBP12.15□□□□□ -0.46
SMC1A-204ENST00000463684 BST1Q10588 318 aa12.15□□□□□ -0.46
SMC1A-204ENST00000463684 HNRNPA0Q13151 305 aaKnown RBP12.15□□□□□ -0.46
SMC1A-204ENST00000463684 SGCAQ16586 387 aa12.15□□□□□ -0.46
SMC1A-204ENST00000463684 DEFB112Q30KQ8 113 aa12.15□□□□□ -0.46
SMC1A-204ENST00000463684 FBLN7Q53RD9 439 aa12.15□□□□□ -0.46
SMC1A-204ENST00000463684 SLC2A7Q6PXP3 512 aa12.15□□□□□ -0.46
SMC1A-204ENST00000463684 ARL9Q6T311 187 aa12.15□□□□□ -0.46
SMC1A-204ENST00000463684 HDDC2Q7Z4H3 204 aa12.15□□□□□ -0.46
SMC1A-204ENST00000463684 NOXO1Q8NFA2 376 aa12.15□□□□□ -0.46
SMC1A-204ENST00000463684 OR2Z1Q8NG97 314 aa12.15□□□□□ -0.46
SMC1A-204ENST00000463684 OR10S1Q8NGN2 331 aa12.15□□□□□ -0.46
SMC1A-204ENST00000463684 AKR7LQ8NHP1 331 aa12.15□□□□□ -0.46
SMC1A-204ENST00000463684 PAIP2Q9BPZ3 127 aaKnown RBP12.15□□□□□ -0.46
SMC1A-204ENST00000463684 WFDC6Q9BQY6 131 aa12.15□□□□□ -0.46
SMC1A-204ENST00000463684 SSBP3Q9BWW4 388 aaPredicted RBP12.15□□□□□ -0.46
SMC1A-204ENST00000463684 SSU72Q9NP77 194 aaKnown RBP12.15□□□□□ -0.46
SMC1A-204ENST00000463684 SDR39U1Q9NRG7 319 aaPredicted RBP12.15□□□□□ -0.46
SMC1A-204ENST00000463684 C1RLQ9NZP8 487 aa12.15□□□□□ -0.46
SMC1A-204ENST00000463684 ZNF229Q9UJW7 825 aa12.15□□□□□ -0.46
SMC1A-204ENST00000463684 PPP1R3CQ9UQK1 317 aa12.15□□□□□ -0.46
SMC1A-204ENST00000463684 CENPBD1B2RD01 187 aa12.14□□□□□ -0.47
SMC1A-204ENST00000463684 SURF4O15260 269 aa12.14□□□□□ -0.47
SMC1A-204ENST00000463684 WNT2P09544 360 aa12.14□□□□□ -0.47
SMC1A-204ENST00000463684 KITP10721 976 aa12.14□□□□□ -0.47
SMC1A-204ENST00000463684 ACADSP16219 412 aa12.14□□□□□ -0.47
SMC1A-204ENST00000463684 CDAP32320 146 aa12.14□□□□□ -0.47
SMC1A-204ENST00000463684 RBMXP38159 391 aaKnown RBP12.14□□□□□ -0.47
SMC1A-204ENST00000463684 BPIFB3P59826 476 aa12.14□□□□□ -0.47
SMC1A-204ENST00000463684 GNB2P62879 340 aa12.14□□□□□ -0.47
SMC1A-204ENST00000463684 PSG4Q00888 419 aa12.14□□□□□ -0.47
SMC1A-204ENST00000463684 SCARB2Q14108 478 aa12.14□□□□□ -0.47
SMC1A-204ENST00000463684 HLXQ14774 488 aaPredicted RBP12.14□□□□□ -0.47
SMC1A-204ENST00000463684 PDCD1Q15116 288 aa12.14□□□□□ -0.47
SMC1A-204ENST00000463684 TAF11Q15544 211 aa12.14□□□□□ -0.47
SMC1A-204ENST00000463684 TAF9Q16594 264 aa12.14□□□□□ -0.47
SMC1A-204ENST00000463684 ASPHD2Q6ICH7 369 aa12.14□□□□□ -0.47
SMC1A-204ENST00000463684 RFPL4BQ6ZWI9 263 aa12.14□□□□□ -0.47
SMC1A-204ENST00000463684 RHOUQ7L0Q8 258 aa12.14□□□□□ -0.47
SMC1A-204ENST00000463684 NANOGNBQ7Z5D8 188 aa12.14□□□□□ -0.47
SMC1A-204ENST00000463684 C1QL4Q86Z23 238 aa12.14□□□□□ -0.47
SMC1A-204ENST00000463684 RAB40AQ8WXH6 277 aa12.14□□□□□ -0.47
SMC1A-204ENST00000463684 PLEKHA8Q96JA3 519 aa12.14□□□□□ -0.47
SMC1A-204ENST00000463684 MRPL13Q9BYD1 178 aaKnown RBP12.14□□□□□ -0.47
SMC1A-204ENST00000463684 PRDM13Q9H4Q3 707 aa12.14□□□□□ -0.47
SMC1A-204ENST00000463684 KCNK9Q9NPC2 374 aa12.14□□□□□ -0.47
SMC1A-204ENST00000463684 NOX4Q9NPH5 578 aa12.14□□□□□ -0.47
SMC1A-204ENST00000463684 MAN2C1Q9NTJ4 1040 aa12.14□□□□□ -0.47
SMC1A-204ENST00000463684 IL19Q9UHD0 177 aa12.14□□□□□ -0.47
SMC1A-204ENST00000463684 NOTCH1P46531 2555 aa12.14□□□□□ -0.47
SMC1A-204ENST00000463684 IGHV2-70DA0A0C4DH43 119 aa12.13□□□□□ -0.47
SMC1A-204ENST00000463684 CEACAM18A8MTB9 384 aa12.13□□□□□ -0.47
SMC1A-204ENST00000463684 KPNA4O00629 521 aaPredicted RBP12.13□□□□□ -0.47
SMC1A-204ENST00000463684 UBDO15205 165 aa12.13□□□□□ -0.47
SMC1A-204ENST00000463684 RGS16O15492 202 aaPredicted RBP12.13□□□□□ -0.47
SMC1A-204ENST00000463684 TRMUO75648 421 aaKnown RBP12.13□□□□□ -0.47
SMC1A-204ENST00000463684 F13BP05160 661 aa12.13□□□□□ -0.47
SMC1A-204ENST00000463684 VIMP08670 466 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms