RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-204ENST00000462815 RNF121Q9H920 327 aa9.43□□□□□ -0.9
PTPN7-204ENST00000462815 SIAEQ9HAT2 523 aa9.43□□□□□ -0.9
PTPN7-204ENST00000462815 NPHS2Q9NP85 383 aa9.43□□□□□ -0.9
PTPN7-204ENST00000462815 MMP26Q9NRE1 261 aa9.43□□□□□ -0.9
PTPN7-204ENST00000462815 C20orf141Q9NUB4 165 aa9.43□□□□□ -0.9
PTPN7-204ENST00000462815 PPIAL4AQ9Y536 164 aa9.43□□□□□ -0.9
PTPN7-204ENST00000462815 IQCMA0A1B0GVH7 501 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 DNAJC9-AS1A6NH13 148 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 NPIPB13A6NJU9 1138 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 NPIPB4C9JG80 1138 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 F5H0A9 414 aaPredicted RBP9.42□□□□□ -0.9
PTPN7-204ENST00000462815 TRAPPC2LH3BP13 241 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 SPRY3O43610 288 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 NGFP01138 241 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 IGF2P01344 180 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 F13BP05160 661 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 ACADSP16219 412 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 ZNF32P17041 273 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 STOMP27105 288 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 CLRN1P58418 232 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 MTPNP58546 118 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 SEC61A1P61619 476 aaKnown RBP9.42□□□□□ -0.9
PTPN7-204ENST00000462815 CBX1P83916 185 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 PSG4Q00888 419 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 FMODQ06828 376 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 AGKQ53H12 422 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 SLC25A47Q6Q0C1 308 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 FOXL2NBQ6ZUU3 175 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 NANOGNBQ7Z5D8 188 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 PIGWQ7Z7B1 504 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 NKAIN4Q8IVV8 208 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 BPIFB2Q8N4F0 458 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 SIGLECL1Q8N7X8 197 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 SYT14Q8NB59 555 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 AKR7LQ8NHP1 331 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 MOSPD2Q8NHP6 518 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 PFN4Q8NHR9 129 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 VANGL1Q8TAA9 524 aaPredicted RBP9.42□□□□□ -0.9
PTPN7-204ENST00000462815 GEMIN6Q8WXD5 167 aaKnown RBP9.42□□□□□ -0.9
PTPN7-204ENST00000462815 CCL17Q92583 94 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 RAB1CQ92928 201 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 SIGLEC11Q96RL6 698 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 CCT8L2Q96SF2 557 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 GAL3ST1Q99999 423 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 OR2J1Q9GZK6 312 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 WNT5BQ9H1J7 359 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 KAT8Q9H7Z6 458 aaKnown RBP9.42□□□□□ -0.9
PTPN7-204ENST00000462815 SMURF2Q9HAU4 748 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 NTN4Q9HB63 628 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 DECR2Q9NUI1 292 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 ZNF69Q9UC07 566 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.42□□□□□ -0.9
PTPN7-204ENST00000462815 SLC13A4Q9UKG4 626 aa9.42□□□□□ -0.9
PTPN7-204ENST00000462815 A8MXK9 166 aa9.41□□□□□ -0.9
PTPN7-204ENST00000462815 EVPLLA8MZ36 301 aa9.41□□□□□ -0.9
PTPN7-204ENST00000462815 BLOC1S5-TXNDC5H3BN57 136 aa9.41□□□□□ -0.9
PTPN7-204ENST00000462815 H3BSA7 217 aa9.41□□□□□ -0.9
PTPN7-204ENST00000462815 OR7A10O76100 309 aa9.41□□□□□ -0.9
PTPN7-204ENST00000462815 MT-ND1P03886 318 aa9.41□□□□□ -0.9
PTPN7-204ENST00000462815 ZNF12P17014 697 aa9.41□□□□□ -0.9
PTPN7-204ENST00000462815 FUT4P22083 530 aa9.41□□□□□ -0.9
PTPN7-204ENST00000462815 PRTN3P24158 256 aa9.41□□□□□ -0.9
PTPN7-204ENST00000462815 PCGF2P35227 344 aa9.41□□□□□ -0.9
PTPN7-204ENST00000462815 APLNRP35414 380 aa9.41□□□□□ -0.9
PTPN7-204ENST00000462815 AQP2P41181 271 aa9.41□□□□□ -0.9
PTPN7-204ENST00000462815 ZNF84P51523 738 aa9.41□□□□□ -0.9
PTPN7-204ENST00000462815 PAX2Q02962 417 aa9.41□□□□□ -0.9
PTPN7-204ENST00000462815 FOXL1Q12952 345 aa9.41□□□□□ -0.9
PTPN7-204ENST00000462815 FHL1Q13642 323 aa9.41□□□□□ -0.9
PTPN7-204ENST00000462815 MOGQ16653 247 aa9.41□□□□□ -0.9
PTPN7-204ENST00000462815 ZNF718Q3SXZ3 478 aa9.41□□□□□ -0.9
PTPN7-204ENST00000462815 SHISA2Q6UWI4 295 aa9.41□□□□□ -0.9
PTPN7-204ENST00000462815 Q6ZR03 302 aa9.41□□□□□ -0.9
PTPN7-204ENST00000462815 CCDC80Q76M96 950 aa9.41□□□□□ -0.9
PTPN7-204ENST00000462815 ZNF771Q7L3S4 317 aaPredicted RBP9.41□□□□□ -0.9
PTPN7-204ENST00000462815 DHDDSQ86SQ9 333 aa9.41□□□□□ -0.9
PTPN7-204ENST00000462815 BCL6BQ8N143 479 aaPredicted RBP9.41□□□□□ -0.9
PTPN7-204ENST00000462815 ICA1LQ8NDH6 482 aa9.41□□□□□ -0.9
PTPN7-204ENST00000462815 TMEM255BQ8WV15 326 aa9.41□□□□□ -0.9
PTPN7-204ENST00000462815 POP5Q969H6 163 aaKnown RBP9.41□□□□□ -0.9
PTPN7-204ENST00000462815 DACT3Q96B18 629 aaPredicted RBP9.41□□□□□ -0.9
PTPN7-204ENST00000462815 THOC1Q96FV9 657 aaKnown RBP9.41□□□□□ -0.9
PTPN7-204ENST00000462815 TIMD4Q96H15 378 aa9.41□□□□□ -0.9
PTPN7-204ENST00000462815 CGREF1Q99674 301 aa9.41□□□□□ -0.9
PTPN7-204ENST00000462815 POFUT1Q9H488 388 aa9.41□□□□□ -0.9
PTPN7-204ENST00000462815 PURGQ9UJV8 347 aaKnown RBP9.41□□□□□ -0.9
PTPN7-204ENST00000462815 NPTNQ9Y639 398 aa9.41□□□□□ -0.9
PTPN7-204ENST00000462815 C5orf49A4QMS7 147 aa9.4□□□□□ -0.9
PTPN7-204ENST00000462815 SNX3O60493 162 aa9.4□□□□□ -0.9
PTPN7-204ENST00000462815 FAM107AO95990 144 aa9.4□□□□□ -0.9
PTPN7-204ENST00000462815 IGHMP01871 453 aa9.4□□□□□ -0.9
PTPN7-204ENST00000462815 MT-ND5P03915 603 aa9.4□□□□□ -0.9
PTPN7-204ENST00000462815 SCG5P05408 212 aa9.4□□□□□ -0.9
PTPN7-204ENST00000462815 FUT1P19526 365 aa9.4□□□□□ -0.9
PTPN7-204ENST00000462815 RBM34P42696 430 aaKnown RBP9.4□□□□□ -0.9
PTPN7-204ENST00000462815 SLC6A9P48067 706 aa9.4□□□□□ -0.9
PTPN7-204ENST00000462815 ERVK-25P63136 954 aa9.4□□□□□ -0.9
PTPN7-204ENST00000462815 HSF2Q03933 536 aa9.4□□□□□ -0.9
PTPN7-204ENST00000462815 PLP2Q04941 152 aa9.4□□□□□ -0.9
PTPN7-204ENST00000462815 PSG7Q13046 419 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms