RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 ZNF264O43296 627 aa11.21□□□□□ -0.62
COL4A6-204ENST00000461897 GLSO94925 669 aaPredicted RBP11.21□□□□□ -0.62
COL4A6-204ENST00000461897 CFDP00746 253 aaPredicted RBP11.21□□□□□ -0.62
COL4A6-204ENST00000461897 KLK3P07288 261 aaPredicted RBP11.21□□□□□ -0.62
COL4A6-204ENST00000461897 UMODP07911 640 aa11.21□□□□□ -0.62
COL4A6-204ENST00000461897 ADRA2CP18825 462 aa11.21□□□□□ -0.62
COL4A6-204ENST00000461897 CDK2P24941 298 aa11.21□□□□□ -0.62
COL4A6-204ENST00000461897 MST1P26927 711 aa11.21□□□□□ -0.62
COL4A6-204ENST00000461897 SSTR2P30874 369 aa11.21□□□□□ -0.62
COL4A6-204ENST00000461897 CDKN2AP42771 156 aaKnown RBP11.21□□□□□ -0.62
COL4A6-204ENST00000461897 PNLIPRP2P54317 469 aa11.21□□□□□ -0.62
COL4A6-204ENST00000461897 SLC26A5P58743 744 aa11.21□□□□□ -0.62
COL4A6-204ENST00000461897 SPEM2Q0P670 501 aa11.21□□□□□ -0.62
COL4A6-204ENST00000461897 POU4F3Q15319 338 aa11.21□□□□□ -0.62
COL4A6-204ENST00000461897 ZNF74Q16587 644 aa11.21□□□□□ -0.62
COL4A6-204ENST00000461897 STPG1Q5TH74 334 aa11.21□□□□□ -0.62
COL4A6-204ENST00000461897 LEG1Q6P5S2 330 aa11.21□□□□□ -0.62
COL4A6-204ENST00000461897 ATG4DQ86TL0 474 aaPredicted RBP11.21□□□□□ -0.62
COL4A6-204ENST00000461897 MOSPD2Q8NHP6 518 aa11.21□□□□□ -0.62
COL4A6-204ENST00000461897 DACT3Q96B18 629 aaPredicted RBP11.21□□□□□ -0.62
COL4A6-204ENST00000461897 WBP1Q96G27 269 aa11.21□□□□□ -0.62
COL4A6-204ENST00000461897 GPN1Q9HCN4 374 aaPredicted RBP11.21□□□□□ -0.62
COL4A6-204ENST00000461897 TMEM9BQ9NQ34 198 aa11.21□□□□□ -0.62
COL4A6-204ENST00000461897 NKIRAS2Q9NYR9 191 aa11.21□□□□□ -0.62
COL4A6-204ENST00000461897 TAS2R10Q9NYW0 307 aa11.21□□□□□ -0.62
COL4A6-204ENST00000461897 KLK11Q9UBX7 282 aa11.21□□□□□ -0.62
COL4A6-204ENST00000461897 TRBV11-1A0A0K0K1C0 115 aa11.2□□□□□ -0.62
COL4A6-204ENST00000461897 ALG1L2C9J202 215 aa11.2□□□□□ -0.62
COL4A6-204ENST00000461897 ZNF254O75437 659 aa11.2□□□□□ -0.62
COL4A6-204ENST00000461897 KHDRBS3O75525 346 aaKnown RBP11.2□□□□□ -0.62
COL4A6-204ENST00000461897 KLF7O75840 302 aaPredicted RBP11.2□□□□□ -0.62
COL4A6-204ENST00000461897 SDHAP31040 664 aa11.2□□□□□ -0.62
COL4A6-204ENST00000461897 RAD52P43351 418 aa11.2□□□□□ -0.62
COL4A6-204ENST00000461897 TAS2R20P59543 309 aa11.2□□□□□ -0.62
COL4A6-204ENST00000461897 TSPAN5P62079 268 aa11.2□□□□□ -0.62
COL4A6-204ENST00000461897 ZNF117Q03924 483 aa11.2□□□□□ -0.62
COL4A6-204ENST00000461897 OPCMLQ14982 345 aa11.2□□□□□ -0.62
COL4A6-204ENST00000461897 LINC00303Q3SY05 128 aa11.2□□□□□ -0.62
COL4A6-204ENST00000461897 NHLRC3Q5JS37 347 aa11.2□□□□□ -0.62
COL4A6-204ENST00000461897 WBP2NLQ6ICG8 309 aa11.2□□□□□ -0.62
COL4A6-204ENST00000461897 FAM220AQ7Z4H9 259 aa11.2□□□□□ -0.62
COL4A6-204ENST00000461897 DNAAF1Q8NEP3 725 aa11.2□□□□□ -0.62
COL4A6-204ENST00000461897 NUBPLQ8TB37 319 aa11.2□□□□□ -0.62
COL4A6-204ENST00000461897 THAP3Q8WTV1 239 aaPredicted RBP11.2□□□□□ -0.62
COL4A6-204ENST00000461897 ORAI1Q96D31 301 aa11.2□□□□□ -0.62
COL4A6-204ENST00000461897 Q96M85 177 aa11.2□□□□□ -0.62
COL4A6-204ENST00000461897 TCF7L1Q9HCS4 588 aa11.2□□□□□ -0.62
COL4A6-204ENST00000461897 MRPL15Q9P015 296 aaKnown RBP11.2□□□□□ -0.62
COL4A6-204ENST00000461897 FRRS1LQ9P0K9 344 aa11.2□□□□□ -0.62
COL4A6-204ENST00000461897 MGAT4CQ9UBM8 478 aa11.2□□□□□ -0.62
COL4A6-204ENST00000461897 GPN3Q9UHW5 284 aaPredicted RBP11.2□□□□□ -0.62
COL4A6-204ENST00000461897 LOC102723996A0A087X1L8 192 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 A0A1W2PPL8 197 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 A0A1W2PQD3 144 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 OR4C45A6NMZ5 311 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 TTLL8A6PVC2 850 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 I3L521 148 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 ADAM10O14672 748 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 GNB5O14775 395 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 XRCC3O43542 346 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 CREBL2O60519 120 aaPredicted RBP11.19□□□□□ -0.62
COL4A6-204ENST00000461897 ASAH2BP0C7U1 165 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 CCR4P51679 360 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 RAB14P61106 215 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 EGR3Q06889 387 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 CBFBQ13951 182 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 LIPNQ5VXI9 398 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 MARCH3Q86UD3 253 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 GPAT4Q86UL3 456 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 JAZF1Q86VZ6 243 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 ZNF433Q8N7K0 673 aaPredicted RBP11.19□□□□□ -0.62
COL4A6-204ENST00000461897 OR5AK2Q8NH90 309 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 ZNF417Q8TAU3 575 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 THRSPQ92748 146 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 GCDHQ92947 438 aaPredicted RBP11.19□□□□□ -0.62
COL4A6-204ENST00000461897 SEC22CQ9BRL7 303 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 TSPAN10Q9H1Z9 355 aaPredicted RBP11.19□□□□□ -0.62
COL4A6-204ENST00000461897 C12orf10Q9HB07 376 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 BEX1Q9HBH7 125 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 C19orf25Q9UFG5 118 aaPredicted RBP11.19□□□□□ -0.62
COL4A6-204ENST00000461897 KLHDC2Q9Y2U9 406 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 HMSDA8MTL9 139 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 C9J4A7 227 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 H7C417 338 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 FADS1O60427 444 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 ZNF250P15622 560 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 CXCL2P19875 107 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 CALCRP30988 508 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 DCTDP32321 178 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 AQP2P41181 271 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 NUBP1P53384 320 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 RPS15P62841 145 aaKnown RBP11.19□□□□□ -0.62
COL4A6-204ENST00000461897 PCOLCEQ15113 449 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 SMUG1Q53HV7 270 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 DCAF12Q5T6F0 453 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 CDCP2Q5VXM1 449 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 SLC25A25Q6KCM7 469 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 FDX2Q6P4F2 183 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 RAB11FIP2Q7L804 512 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 SLC36A1Q7Z2H8 476 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms