RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 NABP1Q96AH0 204 aa13.28□□□□□ -0.28
VARS-219ENST00000461328 ASB9Q96DX5 294 aa13.28□□□□□ -0.28
VARS-219ENST00000461328 GPX7Q96SL4 187 aaPredicted RBP13.28□□□□□ -0.28
VARS-219ENST00000461328 FUZQ9BT04 418 aa13.28□□□□□ -0.28
VARS-219ENST00000461328 OR51B6Q9H340 312 aa13.28□□□□□ -0.28
VARS-219ENST00000461328 MAGIXQ9H6Y5 334 aa13.28□□□□□ -0.28
VARS-219ENST00000461328 TAS2R1Q9NYW7 299 aa13.28□□□□□ -0.28
VARS-219ENST00000461328 FBXO9Q9UK97 447 aaPredicted RBP13.28□□□□□ -0.28
VARS-219ENST00000461328 IER3IP1Q9Y5U9 82 aa13.28□□□□□ -0.28
VARS-219ENST00000461328 CR1P17927 2039 aa13.27□□□□□ -0.28
VARS-219ENST00000461328 TCRBV5S2A0A599 114 aa13.27□□□□□ -0.29
VARS-219ENST00000461328 PRSS37A4D1T9 235 aa13.27□□□□□ -0.29
VARS-219ENST00000461328 GYG2O15488 501 aa13.27□□□□□ -0.29
VARS-219ENST00000461328 KRT36O76013 467 aa13.27□□□□□ -0.29
VARS-219ENST00000461328 PPP1R3DO95685 299 aa13.27□□□□□ -0.29
VARS-219ENST00000461328 FAM157BP0CG42 384 aa13.27□□□□□ -0.29
VARS-219ENST00000461328 CCL2P13500 99 aa13.27□□□□□ -0.29
VARS-219ENST00000461328 ZNF32P17041 273 aa13.27□□□□□ -0.29
VARS-219ENST00000461328 MSR1P21757 451 aa13.27□□□□□ -0.29
VARS-219ENST00000461328 CCNOP22674 350 aa13.27□□□□□ -0.29
VARS-219ENST00000461328 FPR3P25089 353 aa13.27□□□□□ -0.29
VARS-219ENST00000461328 LAP3P28838 519 aa13.27□□□□□ -0.29
VARS-219ENST00000461328 SLC6A6P31641 620 aa13.27□□□□□ -0.29
VARS-219ENST00000461328 PPOXP50336 477 aa13.27□□□□□ -0.29
VARS-219ENST00000461328 PDLIM4P50479 330 aa13.27□□□□□ -0.29
VARS-219ENST00000461328 CARTPTQ16568 116 aa13.27□□□□□ -0.29
VARS-219ENST00000461328 PABPC1L2AQ5JQF8 200 aa13.27□□□□□ -0.29
VARS-219ENST00000461328 DPY19L2P2Q6ZN68 376 aa13.27□□□□□ -0.29
VARS-219ENST00000461328 FAM122BQ7Z309 247 aa13.27□□□□□ -0.29
VARS-219ENST00000461328 ZER1Q7Z7L7 766 aa13.27□□□□□ -0.29
VARS-219ENST00000461328 ADCK1Q86TW2 530 aa13.27□□□□□ -0.29
VARS-219ENST00000461328 ICA1LQ8NDH6 482 aa13.27□□□□□ -0.29
VARS-219ENST00000461328 GNPDA2Q8TDQ7 276 aa13.27□□□□□ -0.29
VARS-219ENST00000461328 POP5Q969H6 163 aaKnown RBP13.27□□□□□ -0.29
VARS-219ENST00000461328 GPA33Q99795 319 aa13.27□□□□□ -0.29
VARS-219ENST00000461328 C1orf21Q9H246 121 aa13.27□□□□□ -0.29
VARS-219ENST00000461328 OR52D1Q9H346 318 aa13.27□□□□□ -0.29
VARS-219ENST00000461328 SLC22A23A1A5C7 686 aa13.26□□□□□ -0.29
VARS-219ENST00000461328 AHCYL1O43865 530 aa13.26□□□□□ -0.29
VARS-219ENST00000461328 CD5LO43866 347 aa13.26□□□□□ -0.29
VARS-219ENST00000461328 PTP4A3O75365 173 aa13.26□□□□□ -0.29
VARS-219ENST00000461328 APEX1P27695 318 aaKnown RBP13.26□□□□□ -0.29
VARS-219ENST00000461328 PCBD1P61457 104 aa13.26□□□□□ -0.29
VARS-219ENST00000461328 MS4A2Q01362 244 aa13.26□□□□□ -0.29
VARS-219ENST00000461328 RGS7BPQ6MZT1 257 aaPredicted RBP13.26□□□□□ -0.29
VARS-219ENST00000461328 JAZF1Q86VZ6 243 aa13.26□□□□□ -0.29
VARS-219ENST00000461328 AKR7LQ8NHP1 331 aa13.26□□□□□ -0.29
VARS-219ENST00000461328 MRPL24Q96A35 216 aaKnown RBP13.26□□□□□ -0.29
VARS-219ENST00000461328 FOXN4Q96NZ1 517 aa13.26□□□□□ -0.29
VARS-219ENST00000461328 ERMAPQ96PL5 475 aaPredicted RBP13.26□□□□□ -0.29
VARS-219ENST00000461328 SYT3Q9BQG1 590 aa13.26□□□□□ -0.29
VARS-219ENST00000461328 IFT27Q9BW83 186 aa13.26□□□□□ -0.29
VARS-219ENST00000461328 RAB1BQ9H0U4 201 aa13.26□□□□□ -0.29
VARS-219ENST00000461328 SYT4Q9H2B2 425 aa13.26□□□□□ -0.29
VARS-219ENST00000461328 REEP1Q9H902 201 aa13.26□□□□□ -0.29
VARS-219ENST00000461328 NRIP3Q9NQ35 241 aa13.26□□□□□ -0.29
VARS-219ENST00000461328 YAE1D1Q9NRH1 226 aa13.26□□□□□ -0.29
VARS-219ENST00000461328 FZR1Q9UM11 496 aa13.26□□□□□ -0.29
VARS-219ENST00000461328 LYVE1Q9Y5Y7 322 aa13.26□□□□□ -0.29
VARS-219ENST00000461328 A0A096LNT2 108 aa13.25□□□□□ -0.29
VARS-219ENST00000461328 A0A1W2PPW3 197 aa13.25□□□□□ -0.29
VARS-219ENST00000461328 C12orf71A8MTZ7 269 aa13.25□□□□□ -0.29
VARS-219ENST00000461328 TLX2O43763 284 aaPredicted RBP13.25□□□□□ -0.29
VARS-219ENST00000461328 SLC16A7O60669 478 aa13.25□□□□□ -0.29
VARS-219ENST00000461328 KHDRBS3O75525 346 aaKnown RBP13.25□□□□□ -0.29
VARS-219ENST00000461328 CCNB2O95067 398 aa13.25□□□□□ -0.29
VARS-219ENST00000461328 LCKP06239 509 aa13.25□□□□□ -0.29
VARS-219ENST00000461328 CST2P09228 141 aa13.25□□□□□ -0.29
VARS-219ENST00000461328 MMP7P09237 267 aaPredicted RBP13.25□□□□□ -0.29
VARS-219ENST00000461328 CTLA4P16410 223 aa13.25□□□□□ -0.29
VARS-219ENST00000461328 NOS3P29474 1203 aa13.25□□□□□ -0.29
VARS-219ENST00000461328 GLRXP35754 106 aa13.25□□□□□ -0.29
VARS-219ENST00000461328 MAGEA2P43356 314 aa13.25□□□□□ -0.29
VARS-219ENST00000461328 CENPAP49450 140 aa13.25□□□□□ -0.29
VARS-219ENST00000461328 GDI2P50395 445 aaKnown RBP13.25□□□□□ -0.29
VARS-219ENST00000461328 FXYD6P3P58550 94 aa13.25□□□□□ -0.29
VARS-219ENST00000461328 LOXL1Q08397 574 aaPredicted RBP13.25□□□□□ -0.29
VARS-219ENST00000461328 FAM27BQ5VT28 67 aa13.25□□□□□ -0.29
VARS-219ENST00000461328 PGBD2Q6P3X8 592 aa13.25□□□□□ -0.29
VARS-219ENST00000461328 DNM1P34Q6PK57 102 aa13.25□□□□□ -0.29
VARS-219ENST00000461328 PAQR4Q8N4S7 273 aaPredicted RBP13.25□□□□□ -0.29
VARS-219ENST00000461328 LINC00471Q8N535 108 aa13.25□□□□□ -0.29
VARS-219ENST00000461328 OR9Q2Q8NGE9 314 aa13.25□□□□□ -0.29
VARS-219ENST00000461328 OR52L1Q8NGH7 329 aa13.25□□□□□ -0.29
VARS-219ENST00000461328 SAMD8Q96LT4 415 aa13.25□□□□□ -0.29
VARS-219ENST00000461328 DOK1Q99704 481 aa13.25□□□□□ -0.29
VARS-219ENST00000461328 PIMREGQ9BSJ6 248 aa13.25□□□□□ -0.29
VARS-219ENST00000461328 MRPL37Q9BZE1 423 aaKnown RBP13.25□□□□□ -0.29
VARS-219ENST00000461328 MYOZ1Q9NP98 299 aaPredicted RBP13.25□□□□□ -0.29
VARS-219ENST00000461328 EMC7Q9NPA0 242 aa13.25□□□□□ -0.29
VARS-219ENST00000461328 POLE4Q9NR33 117 aa13.25□□□□□ -0.29
VARS-219ENST00000461328 POLR1DQ9Y2S0 133 aa13.25□□□□□ -0.29
VARS-219ENST00000461328 SAMHD1Q9Y3Z3 626 aaKnown RBP13.25□□□□□ -0.29
VARS-219ENST00000461328 ARFGEF3Q5TH69 2177 aa13.24□□□□□ -0.29
VARS-219ENST00000461328 M0R233 179 aa13.24□□□□□ -0.29
VARS-219ENST00000461328 NDUFS8O00217 210 aa13.24□□□□□ -0.29
VARS-219ENST00000461328 RENP00797 406 aa13.24□□□□□ -0.29
VARS-219ENST00000461328 USF1P22415 310 aaPredicted RBP13.24□□□□□ -0.29
VARS-219ENST00000461328 STOMP27105 288 aa13.24□□□□□ -0.29
VARS-219ENST00000461328 GSSP48637 474 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms