RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 PATL1Q86TB9 770 aaKnown RBP12.3□□□□□ -0.44
DNMT3A-207ENST00000461228 KLHL36Q8N4N3 616 aa12.3□□□□□ -0.44
DNMT3A-207ENST00000461228 OR6T1Q8NGN1 323 aa12.3□□□□□ -0.44
DNMT3A-207ENST00000461228 KLF14Q8TD94 323 aaPredicted RBP12.3□□□□□ -0.44
DNMT3A-207ENST00000461228 WFDC6Q9BQY6 131 aa12.3□□□□□ -0.44
DNMT3A-207ENST00000461228 EIF3KQ9UBQ5 218 aaKnown RBP12.3□□□□□ -0.44
DNMT3A-207ENST00000461228 KLHL21Q9UJP4 597 aa12.3□□□□□ -0.44
DNMT3A-207ENST00000461228 UGT2A1Q9Y4X1 527 aa12.3□□□□□ -0.44
DNMT3A-207ENST00000461228 PPIAL4AQ9Y536 164 aa12.3□□□□□ -0.44
DNMT3A-207ENST00000461228 NPTNQ9Y639 398 aa12.3□□□□□ -0.44
DNMT3A-207ENST00000461228 USH1CQ9Y6N9 552 aa12.3□□□□□ -0.44
DNMT3A-207ENST00000461228 MCIDASD6RGH6 385 aa12.29□□□□□ -0.44
DNMT3A-207ENST00000461228 M0R3H8 397 aa12.29□□□□□ -0.44
DNMT3A-207ENST00000461228 ZNF500O60304 480 aaPredicted RBP12.29□□□□□ -0.44
DNMT3A-207ENST00000461228 CH25HO95992 272 aa12.29□□□□□ -0.44
DNMT3A-207ENST00000461228 THY1P04216 161 aa12.29□□□□□ -0.44
DNMT3A-207ENST00000461228 CCL2P13500 99 aa12.29□□□□□ -0.44
DNMT3A-207ENST00000461228 TNFRSF1AP19438 455 aa12.29□□□□□ -0.44
DNMT3A-207ENST00000461228 UGT2B15P54855 530 aa12.29□□□□□ -0.44
DNMT3A-207ENST00000461228 RPL18Q07020 188 aaKnown RBP12.29□□□□□ -0.44
DNMT3A-207ENST00000461228 TMEM255AQ5JRV8 349 aa12.29□□□□□ -0.44
DNMT3A-207ENST00000461228 ARMC4Q5T2S8 1044 aa12.29□□□□□ -0.44
DNMT3A-207ENST00000461228 FAM27BQ5VT28 67 aa12.29□□□□□ -0.44
DNMT3A-207ENST00000461228 RFPL4BQ6ZWI9 263 aa12.29□□□□□ -0.44
DNMT3A-207ENST00000461228 SYT9Q86SS6 491 aa12.29□□□□□ -0.44
DNMT3A-207ENST00000461228 PTOV1Q86YD1 416 aa12.29□□□□□ -0.44
DNMT3A-207ENST00000461228 MUC20Q8N307 709 aaPredicted RBP12.29□□□□□ -0.44
DNMT3A-207ENST00000461228 DPP10Q8N608 796 aa12.29□□□□□ -0.44
DNMT3A-207ENST00000461228 SIGLECL1Q8N7X8 197 aa12.29□□□□□ -0.44
DNMT3A-207ENST00000461228 ANKRD42Q8N9B4 389 aa12.29□□□□□ -0.44
DNMT3A-207ENST00000461228 GPR32P1Q8NGA4 272 aa12.29□□□□□ -0.44
DNMT3A-207ENST00000461228 CCL17Q92583 94 aa12.29□□□□□ -0.44
DNMT3A-207ENST00000461228 ZNF347Q96SE7 839 aa12.29□□□□□ -0.44
DNMT3A-207ENST00000461228 PAIP2Q9BPZ3 127 aaKnown RBP12.29□□□□□ -0.44
DNMT3A-207ENST00000461228 CCDC28BQ9BUN5 200 aa12.29□□□□□ -0.44
DNMT3A-207ENST00000461228 ALG12Q9BV10 488 aa12.29□□□□□ -0.44
DNMT3A-207ENST00000461228 MRI1Q9BV20 369 aa12.29□□□□□ -0.44
DNMT3A-207ENST00000461228 PATZ1Q9HBE1 687 aaKnown RBP12.29□□□□□ -0.44
DNMT3A-207ENST00000461228 CCNB1IP1Q9NPC3 277 aa12.29□□□□□ -0.44
DNMT3A-207ENST00000461228 SLAMF8Q9P0V8 285 aa12.29□□□□□ -0.44
DNMT3A-207ENST00000461228 RAB21Q9UL25 225 aa12.29□□□□□ -0.44
DNMT3A-207ENST00000461228 NDRG4Q9ULP0 352 aaKnown RBP12.29□□□□□ -0.44
DNMT3A-207ENST00000461228 INSIG2Q9Y5U4 225 aa12.29□□□□□ -0.44
DNMT3A-207ENST00000461228 AUP1Q9Y679 476 aa12.29□□□□□ -0.44
DNMT3A-207ENST00000461228 PLATP00750 562 aa12.28□□□□□ -0.44
DNMT3A-207ENST00000461228 MT-ND1P03886 318 aa12.28□□□□□ -0.44
DNMT3A-207ENST00000461228 HIST1H2ABP04908 130 aa12.28□□□□□ -0.44
DNMT3A-207ENST00000461228 COX5BP10606 129 aa12.28□□□□□ -0.44
DNMT3A-207ENST00000461228 THRBP10828 461 aa12.28□□□□□ -0.44
DNMT3A-207ENST00000461228 ACADSP16219 412 aa12.28□□□□□ -0.44
DNMT3A-207ENST00000461228 AQP1P29972 269 aa12.28□□□□□ -0.44
DNMT3A-207ENST00000461228 GDI2P50395 445 aaKnown RBP12.28□□□□□ -0.44
DNMT3A-207ENST00000461228 RPL15P61313 204 aaKnown RBP12.28□□□□□ -0.44
DNMT3A-207ENST00000461228 PCBD1P61457 104 aa12.28□□□□□ -0.44
DNMT3A-207ENST00000461228 BTG1P62324 171 aa12.28□□□□□ -0.44
DNMT3A-207ENST00000461228 LCN2P80188 198 aa12.28□□□□□ -0.44
DNMT3A-207ENST00000461228 TSTQ16762 297 aaKnown RBP12.28□□□□□ -0.44
DNMT3A-207ENST00000461228 DUSP7Q16829 419 aa12.28□□□□□ -0.44
DNMT3A-207ENST00000461228 MTX3Q5HYI7 312 aa12.28□□□□□ -0.44
DNMT3A-207ENST00000461228 KLF17Q5JT82 389 aaPredicted RBP12.28□□□□□ -0.44
DNMT3A-207ENST00000461228 PAGE3Q5JUK9 113 aa12.28□□□□□ -0.44
DNMT3A-207ENST00000461228 INTS11Q5TA45 600 aaKnown RBP12.28□□□□□ -0.44
DNMT3A-207ENST00000461228 ARL9Q6T311 187 aa12.28□□□□□ -0.44
DNMT3A-207ENST00000461228 DLEU7Q6UYE1 221 aa12.28□□□□□ -0.44
DNMT3A-207ENST00000461228 HIST3H2AQ7L7L0 130 aa12.28□□□□□ -0.44
DNMT3A-207ENST00000461228 GTF3AQ92664 365 aaKnown RBP12.28□□□□□ -0.44
DNMT3A-207ENST00000461228 HIST1H2ACQ93077 130 aa12.28□□□□□ -0.44
DNMT3A-207ENST00000461228 DACT3Q96B18 629 aaPredicted RBP12.28□□□□□ -0.44
DNMT3A-207ENST00000461228 SAMD8Q96LT4 415 aa12.28□□□□□ -0.44
DNMT3A-207ENST00000461228 PRDM13Q9H4Q3 707 aa12.28□□□□□ -0.44
DNMT3A-207ENST00000461228 UNKLQ9H9P5 680 aaKnown RBP12.28□□□□□ -0.44
DNMT3A-207ENST00000461228 ELOVL3Q9HB03 270 aa12.28□□□□□ -0.44
DNMT3A-207ENST00000461228 MEPEQ9NQ76 525 aaPredicted RBP12.28□□□□□ -0.44
DNMT3A-207ENST00000461228 NKIRAS1Q9NYS0 192 aa12.28□□□□□ -0.44
DNMT3A-207ENST00000461228 ATPIF1Q9UII2 106 aa12.28□□□□□ -0.44
DNMT3A-207ENST00000461228 SLC7A7Q9UM01 511 aa12.28□□□□□ -0.44
DNMT3A-207ENST00000461228 LOC100509620A0A075B734 347 aa12.27□□□□□ -0.45
DNMT3A-207ENST00000461228 ISPDA4D126 451 aa12.27□□□□□ -0.45
DNMT3A-207ENST00000461228 CPSF4LA6NMK7 179 aaKnown RBP12.27□□□□□ -0.45
DNMT3A-207ENST00000461228 TRMUO75648 421 aaKnown RBP12.27□□□□□ -0.45
DNMT3A-207ENST00000461228 CST2P09228 141 aa12.27□□□□□ -0.45
DNMT3A-207ENST00000461228 ZNF32P17041 273 aa12.27□□□□□ -0.45
DNMT3A-207ENST00000461228 CD247P20963 164 aa12.27□□□□□ -0.45
DNMT3A-207ENST00000461228 GSTM3P21266 225 aa12.27□□□□□ -0.45
DNMT3A-207ENST00000461228 KITLGP21583 273 aa12.27□□□□□ -0.45
DNMT3A-207ENST00000461228 TNFSF4P23510 183 aa12.27□□□□□ -0.45
DNMT3A-207ENST00000461228 ZFP36P26651 326 aaKnown RBP12.27□□□□□ -0.45
DNMT3A-207ENST00000461228 PCGF2P35227 344 aa12.27□□□□□ -0.45
DNMT3A-207ENST00000461228 MPV17P39210 176 aa12.27□□□□□ -0.45
DNMT3A-207ENST00000461228 MTNR1AP48039 350 aa12.27□□□□□ -0.45
DNMT3A-207ENST00000461228 SLC6A9P48067 706 aa12.27□□□□□ -0.45
DNMT3A-207ENST00000461228 ARHGDIAP52565 204 aa12.27□□□□□ -0.45
DNMT3A-207ENST00000461228 BPIFB3P59826 476 aa12.27□□□□□ -0.45
DNMT3A-207ENST00000461228 GLO1Q04760 184 aa12.27□□□□□ -0.45
DNMT3A-207ENST00000461228 CDK5R2Q13319 367 aa12.27□□□□□ -0.45
DNMT3A-207ENST00000461228 LEG1Q6P5S2 330 aa12.27□□□□□ -0.45
DNMT3A-207ENST00000461228 ALDH16A1Q8IZ83 802 aa12.27□□□□□ -0.45
DNMT3A-207ENST00000461228 SLC25A40Q8TBP6 338 aa12.27□□□□□ -0.45
DNMT3A-207ENST00000461228 TSPEARQ8WU66 669 aa12.27□□□□□ -0.45
DNMT3A-207ENST00000461228 UPRTQ96BW1 309 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms