RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 MUC13Q9H3R2 512 aa19.79■□□□□ 0.76
PTPN4-208ENST00000460289 ADAM21Q9UKJ8 722 aa19.79■□□□□ 0.76
PTPN4-208ENST00000460289 TIMM10BQ9Y5J6 103 aa19.79■□□□□ 0.76
PTPN4-208ENST00000460289 A0A1W2PPL8 197 aa19.78■□□□□ 0.76
PTPN4-208ENST00000460289 PRSS37A4D1T9 235 aa19.78■□□□□ 0.76
PTPN4-208ENST00000460289 H7C1C5 153 aa19.78■□□□□ 0.76
PTPN4-208ENST00000460289 M0R233 179 aa19.78■□□□□ 0.76
PTPN4-208ENST00000460289 STOMP27105 288 aa19.78■□□□□ 0.76
PTPN4-208ENST00000460289 APEX1P27695 318 aaKnown RBP19.78■□□□□ 0.76
PTPN4-208ENST00000460289 RPS6KA3P51812 740 aa19.78■□□□□ 0.76
PTPN4-208ENST00000460289 UCP2P55851 309 aa19.78■□□□□ 0.76
PTPN4-208ENST00000460289 LCN6P62502 163 aa19.78■□□□□ 0.76
PTPN4-208ENST00000460289 KRTAP1-1Q07627 177 aa19.78■□□□□ 0.76
PTPN4-208ENST00000460289 MESTQ5EB52 335 aa19.78■□□□□ 0.76
PTPN4-208ENST00000460289 SMARCD3Q6STE5 483 aa19.78■□□□□ 0.76
PTPN4-208ENST00000460289 CYP2R1Q6VVX0 501 aa19.78■□□□□ 0.76
PTPN4-208ENST00000460289 ZER1Q7Z7L7 766 aa19.78■□□□□ 0.76
PTPN4-208ENST00000460289 ZDHHC21Q8IVQ6 265 aa19.78■□□□□ 0.76
PTPN4-208ENST00000460289 ZCCHC24Q8N2G6 241 aaKnown RBP19.78■□□□□ 0.76
PTPN4-208ENST00000460289 PAQR4Q8N4S7 273 aaPredicted RBP19.78■□□□□ 0.76
PTPN4-208ENST00000460289 ZNF540Q8NDQ6 660 aa19.78■□□□□ 0.76
PTPN4-208ENST00000460289 CPEB3Q8NE35 698 aaKnown RBP19.78■□□□□ 0.76
PTPN4-208ENST00000460289 WACQ9BTA9 647 aa19.78■□□□□ 0.76
PTPN4-208ENST00000460289 REV1Q9UBZ9 1251 aa19.78■□□□□ 0.76
PTPN4-208ENST00000460289 DUSP13Q9UII6 198 aa19.78■□□□□ 0.76
PTPN4-208ENST00000460289 A0A096LNT2 108 aa19.77■□□□□ 0.76
PTPN4-208ENST00000460289 TEX13CA0A0J9YWL9 993 aa19.77■□□□□ 0.76
PTPN4-208ENST00000460289 C12orf71A8MTZ7 269 aa19.77■□□□□ 0.76
PTPN4-208ENST00000460289 TLX2O43763 284 aaPredicted RBP19.77■□□□□ 0.76
PTPN4-208ENST00000460289 CD5LO43866 347 aa19.77■□□□□ 0.76
PTPN4-208ENST00000460289 OR10H3O60404 316 aa19.77■□□□□ 0.76
PTPN4-208ENST00000460289 KRT36O76013 467 aa19.77■□□□□ 0.76
PTPN4-208ENST00000460289 FAM157BP0CG42 384 aa19.77■□□□□ 0.76
PTPN4-208ENST00000460289 MSR1P21757 451 aa19.77■□□□□ 0.76
PTPN4-208ENST00000460289 USF1P22415 310 aaPredicted RBP19.77■□□□□ 0.76
PTPN4-208ENST00000460289 RRM2P31350 389 aa19.77■□□□□ 0.76
PTPN4-208ENST00000460289 PSG4Q00888 419 aa19.77■□□□□ 0.76
PTPN4-208ENST00000460289 KRR1Q13601 381 aaKnown RBP19.77■□□□□ 0.76
PTPN4-208ENST00000460289 CARTPTQ16568 116 aa19.77■□□□□ 0.76
PTPN4-208ENST00000460289 MSMPQ1L6U9 139 aa19.77■□□□□ 0.76
PTPN4-208ENST00000460289 UNQ6126/PRO20091Q6UXV3 157 aa19.77■□□□□ 0.76
PTPN4-208ENST00000460289 SYT9Q86SS6 491 aa19.77■□□□□ 0.76
PTPN4-208ENST00000460289 ADCK1Q86TW2 530 aa19.77■□□□□ 0.76
PTPN4-208ENST00000460289 C11orf40Q8WZ69 217 aa19.77■□□□□ 0.76
PTPN4-208ENST00000460289 POP5Q969H6 163 aaKnown RBP19.77■□□□□ 0.76
PTPN4-208ENST00000460289 SYT3Q9BQG1 590 aa19.77■□□□□ 0.76
PTPN4-208ENST00000460289 GPR160Q9UJ42 338 aa19.77■□□□□ 0.76
PTPN4-208ENST00000460289 IER3IP1Q9Y5U9 82 aa19.77■□□□□ 0.76
PTPN4-208ENST00000460289 INAFM1C9JVW0 142 aa19.76■□□□□ 0.75
PTPN4-208ENST00000460289 LCKP06239 509 aa19.76■□□□□ 0.75
PTPN4-208ENST00000460289 APEHP13798 732 aaKnown RBP19.76■□□□□ 0.75
PTPN4-208ENST00000460289 DAOP14920 347 aa19.76■□□□□ 0.75
PTPN4-208ENST00000460289 CCNOP22674 350 aa19.76■□□□□ 0.75
PTPN4-208ENST00000460289 TRIM25Q14258 630 aaKnown RBP19.76■□□□□ 0.75
PTPN4-208ENST00000460289 THSD4Q6ZMP0 1018 aa19.76■□□□□ 0.75
PTPN4-208ENST00000460289 RINLQ6ZS11 566 aa19.76■□□□□ 0.75
PTPN4-208ENST00000460289 LRP11Q86VZ4 500 aa19.76■□□□□ 0.75
PTPN4-208ENST00000460289 DHFR2Q86XF0 187 aa19.76■□□□□ 0.75
PTPN4-208ENST00000460289 AKR7LQ8NHP1 331 aa19.76■□□□□ 0.75
PTPN4-208ENST00000460289 FOXN4Q96NZ1 517 aa19.76■□□□□ 0.75
PTPN4-208ENST00000460289 GPA33Q99795 319 aa19.76■□□□□ 0.75
PTPN4-208ENST00000460289 OR2H1Q9GZK4 316 aa19.76■□□□□ 0.75
PTPN4-208ENST00000460289 POLE4Q9NR33 117 aa19.76■□□□□ 0.75
PTPN4-208ENST00000460289 FAM53CQ9NYF3 392 aa19.76■□□□□ 0.75
PTPN4-208ENST00000460289 EIF3KQ9UBQ5 218 aaKnown RBP19.76■□□□□ 0.75
PTPN4-208ENST00000460289 IL20RAQ9UHF4 553 aa19.76■□□□□ 0.75
PTPN4-208ENST00000460289 FZR1Q9UM11 496 aa19.76■□□□□ 0.75
PTPN4-208ENST00000460289 PRPF19Q9UMS4 504 aaKnown RBP19.76■□□□□ 0.75
PTPN4-208ENST00000460289 VWC2LB2RUY7 222 aa19.75■□□□□ 0.75
PTPN4-208ENST00000460289 TXNDC12O95881 172 aa19.75■□□□□ 0.75
PTPN4-208ENST00000460289 T-ENOLP0DO92 83 aa19.75■□□□□ 0.75
PTPN4-208ENST00000460289 FPR3P25089 353 aa19.75■□□□□ 0.75
PTPN4-208ENST00000460289 NR4A2P43354 598 aa19.75■□□□□ 0.75
PTPN4-208ENST00000460289 GDI2P50395 445 aaKnown RBP19.75■□□□□ 0.75
PTPN4-208ENST00000460289 FXYD6P3P58550 94 aa19.75■□□□□ 0.75
PTPN4-208ENST00000460289 TMEM249Q2WGJ8 235 aa19.75■□□□□ 0.75
PTPN4-208ENST00000460289 RFX4Q33E94 735 aa19.75■□□□□ 0.75
PTPN4-208ENST00000460289 SYNPRQ8TBG9 265 aa19.75■□□□□ 0.75
PTPN4-208ENST00000460289 RASD2Q96D21 266 aa19.75■□□□□ 0.75
PTPN4-208ENST00000460289 POM121L2Q96KW2 1035 aa19.75■□□□□ 0.75
PTPN4-208ENST00000460289 ZNF416Q9BWM5 594 aa19.75■□□□□ 0.75
PTPN4-208ENST00000460289 C1orf21Q9H246 121 aa19.75■□□□□ 0.75
PTPN4-208ENST00000460289 OR51B6Q9H340 312 aa19.75■□□□□ 0.75
PTPN4-208ENST00000460289 VSX1Q9NZR4 365 aaPredicted RBP19.75■□□□□ 0.75
PTPN4-208ENST00000460289 CR1P17927 2039 aa19.75■□□□□ 0.75
PTPN4-208ENST00000460289 FN1P02751 2386 aaKnown RBP19.75■□□□□ 0.75
PTPN4-208ENST00000460289 A0A1W2PPW3 197 aa19.74■□□□□ 0.75
PTPN4-208ENST00000460289 C5orf49A4QMS7 147 aa19.74■□□□□ 0.75
PTPN4-208ENST00000460289 SOCS2O14508 198 aa19.74■□□□□ 0.75
PTPN4-208ENST00000460289 IMPA2O14732 288 aa19.74■□□□□ 0.75
PTPN4-208ENST00000460289 SLC16A7O60669 478 aa19.74■□□□□ 0.75
PTPN4-208ENST00000460289 KHDRBS3O75525 346 aaKnown RBP19.74■□□□□ 0.75
PTPN4-208ENST00000460289 IGFBP1P08833 259 aaPredicted RBP19.74■□□□□ 0.75
PTPN4-208ENST00000460289 ZNF250P15622 560 aa19.74■□□□□ 0.75
PTPN4-208ENST00000460289 ATP6V1B2P21281 511 aa19.74■□□□□ 0.75
PTPN4-208ENST00000460289 SLC6A6P31641 620 aa19.74■□□□□ 0.75
PTPN4-208ENST00000460289 HMGA2P52926 109 aa19.74■□□□□ 0.75
PTPN4-208ENST00000460289 KLF3P57682 345 aaPredicted RBP19.74■□□□□ 0.75
PTPN4-208ENST00000460289 MOGQ16653 247 aa19.74■□□□□ 0.75
PTPN4-208ENST00000460289 LCN8Q6JVE9 175 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms