RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 SLC22A31A6NKX4 558 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 TRPC5OSA6NMA1 111 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 PIN1P1O15428 100 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 CH25HO95992 272 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 NGFP01138 241 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 PGA4P0DJD7 388 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 PGA3P0DJD8 388 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 IDO1P14902 403 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 ETS2P15036 469 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 GSTM3P21266 225 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 AQP1P29972 269 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 MDH2P40926 338 aaKnown RBP6.64□□□□□ -1.35
HPS4-207ENST00000459918 GUCA1AP43080 201 aaPredicted RBP6.64□□□□□ -1.35
HPS4-207ENST00000459918 MVDP53602 400 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 CDH12P55289 794 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 PCBP3P57721 371 aaKnown RBP6.64□□□□□ -1.35
HPS4-207ENST00000459918 PPP1CBP62140 327 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 ERVK-25P63136 954 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 CD47Q08722 323 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 FADDQ13158 208 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 ZMYND11Q15326 602 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 RGNQ15493 299 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 SGCAQ16586 387 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 TAF9Q16594 264 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 C2orf68Q2NKX9 166 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 DEFB112Q30KQ8 113 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 MTX3Q5HYI7 312 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 GCNT6Q5T4J0 391 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 OGFOD2Q6N063 350 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 WDR93Q6P2C0 686 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 TTC33Q6PID6 262 aaPredicted RBP6.64□□□□□ -1.35
HPS4-207ENST00000459918 RFPL4BQ6ZWI9 263 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 VASH1Q7L8A9 365 aaPredicted RBP6.64□□□□□ -1.35
HPS4-207ENST00000459918 NLRC3Q7RTR2 1065 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 HDDC2Q7Z4H3 204 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 ALDH16A1Q8IZ83 802 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 GOLGA6L1Q8N7Z2 621 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 NOXO1Q8NFA2 376 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 AKR7LQ8NHP1 331 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 NSMAFQ92636 917 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 MCHR2Q969V1 340 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 ZNF347Q96SE7 839 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 ZNF607Q96SK3 696 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 SORT1Q99523 831 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 CITED1Q99966 193 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 PCGF1Q9BSM1 259 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 TMEM43Q9BTV4 400 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 TMEM109Q9BVC6 243 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 PARD6BQ9BYG5 372 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 CHIAQ9BZP6 476 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 CENPHQ9H3R5 247 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 WDR55Q9H6Y2 383 aaPredicted RBP6.64□□□□□ -1.35
HPS4-207ENST00000459918 MEAF6Q9HAF1 191 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 BCL2L10Q9HD36 194 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.64□□□□□ -1.35
HPS4-207ENST00000459918 PNPOQ9NVS9 261 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 C1RLQ9NZP8 487 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 ASH2LQ9UBL3 628 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.64□□□□□ -1.35
HPS4-207ENST00000459918 RNF114Q9Y508 228 aa6.64□□□□□ -1.35
HPS4-207ENST00000459918 IGHV2-70DA0A0C4DH43 119 aa6.63□□□□□ -1.35
HPS4-207ENST00000459918 CPSF4LA6NMK7 179 aaKnown RBP6.63□□□□□ -1.35
HPS4-207ENST00000459918 CEACAM18A8MTB9 384 aa6.63□□□□□ -1.35
HPS4-207ENST00000459918 A8MXK9 166 aa6.63□□□□□ -1.35
HPS4-207ENST00000459918 BLOC1S5-TXNDC5H3BN57 136 aa6.63□□□□□ -1.35
HPS4-207ENST00000459918 CLIC1O00299 241 aa6.63□□□□□ -1.35
HPS4-207ENST00000459918 SURF4O15260 269 aa6.63□□□□□ -1.35
HPS4-207ENST00000459918 RGS16O15492 202 aaPredicted RBP6.63□□□□□ -1.35
HPS4-207ENST00000459918 FMO6PO60774 539 aa6.63□□□□□ -1.35
HPS4-207ENST00000459918 SERPINB7O75635 380 aa6.63□□□□□ -1.35
HPS4-207ENST00000459918 ZNF205O95201 554 aa6.63□□□□□ -1.35
HPS4-207ENST00000459918 TSPAN15O95858 294 aa6.63□□□□□ -1.35
HPS4-207ENST00000459918 ABHD16AO95870 558 aa6.63□□□□□ -1.35
HPS4-207ENST00000459918 ZCCHC18P0CG32 403 aa6.63□□□□□ -1.35
HPS4-207ENST00000459918 KITP10721 976 aa6.63□□□□□ -1.35
HPS4-207ENST00000459918 ZNF32P17041 273 aa6.63□□□□□ -1.35
HPS4-207ENST00000459918 BGNP21810 368 aa6.63□□□□□ -1.35
HPS4-207ENST00000459918 SLC6A2P23975 617 aa6.63□□□□□ -1.35
HPS4-207ENST00000459918 EPHA3P29320 983 aa6.63□□□□□ -1.35
HPS4-207ENST00000459918 CDAP32320 146 aa6.63□□□□□ -1.35
HPS4-207ENST00000459918 CD80P33681 288 aa6.63□□□□□ -1.35
HPS4-207ENST00000459918 RBMXP38159 391 aaKnown RBP6.63□□□□□ -1.35
HPS4-207ENST00000459918 DAP3P51398 398 aaKnown RBP6.63□□□□□ -1.35
HPS4-207ENST00000459918 POLR2JP52435 117 aaKnown RBP6.63□□□□□ -1.35
HPS4-207ENST00000459918 CDK6Q00534 326 aa6.63□□□□□ -1.35
HPS4-207ENST00000459918 STX3Q13277 289 aa6.63□□□□□ -1.35
HPS4-207ENST00000459918 HLXQ14774 488 aaPredicted RBP6.63□□□□□ -1.35
HPS4-207ENST00000459918 NRN1LQ496H8 165 aa6.63□□□□□ -1.35
HPS4-207ENST00000459918 FBLN7Q53RD9 439 aa6.63□□□□□ -1.35
HPS4-207ENST00000459918 RUNDC3AQ59EK9 446 aa6.63□□□□□ -1.35
HPS4-207ENST00000459918 MBNL2Q5VZF2 373 aaKnown RBP6.63□□□□□ -1.35
HPS4-207ENST00000459918 FAM205BPQ63HN1 556 aa6.63□□□□□ -1.35
HPS4-207ENST00000459918 TET2Q6N021 2002 aaPredicted RBP6.63□□□□□ -1.35
HPS4-207ENST00000459918 REEP3Q6NUK4 255 aa6.63□□□□□ -1.35
HPS4-207ENST00000459918 LRFN4Q6PJG9 635 aa6.63□□□□□ -1.35
HPS4-207ENST00000459918 ZNF620Q6ZNG0 422 aa6.63□□□□□ -1.35
HPS4-207ENST00000459918 NBEAL2Q6ZNJ1 2754 aa6.63□□□□□ -1.35
HPS4-207ENST00000459918 C9orf139Q6ZV77 190 aa6.63□□□□□ -1.35
HPS4-207ENST00000459918 ARMC8Q8IUR7 673 aa6.63□□□□□ -1.35
HPS4-207ENST00000459918 C1orf174Q8IYL3 243 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms