RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 IDH3AP50213 366 aa10.03□□□□□ -0.8
LMCD1-206ENST00000456506 SEC61A1P61619 476 aaKnown RBP10.03□□□□□ -0.8
LMCD1-206ENST00000456506 PAX2Q02962 417 aa10.03□□□□□ -0.8
LMCD1-206ENST00000456506 SELPLGQ14242 412 aa10.03□□□□□ -0.8
LMCD1-206ENST00000456506 SPATA46Q5T0L3 261 aa10.03□□□□□ -0.8
LMCD1-206ENST00000456506 TTC33Q6PID6 262 aaPredicted RBP10.03□□□□□ -0.8
LMCD1-206ENST00000456506 ZNF771Q7L3S4 317 aaPredicted RBP10.03□□□□□ -0.8
LMCD1-206ENST00000456506 SYT14Q8NB59 555 aa10.03□□□□□ -0.8
LMCD1-206ENST00000456506 LIPHQ8WWY8 451 aa10.03□□□□□ -0.8
LMCD1-206ENST00000456506 GEMIN6Q8WXD5 167 aaKnown RBP10.03□□□□□ -0.8
LMCD1-206ENST00000456506 CCL17Q92583 94 aa10.03□□□□□ -0.8
LMCD1-206ENST00000456506 HDAC2Q92769 488 aaKnown RBP10.03□□□□□ -0.8
LMCD1-206ENST00000456506 TAF15Q92804 592 aaKnown RBP eCLIP10.03□□□□□ -0.8
LMCD1-206ENST00000456506 POP5Q969H6 163 aaKnown RBP10.03□□□□□ -0.8
LMCD1-206ENST00000456506 DACT3Q96B18 629 aaPredicted RBP10.03□□□□□ -0.8
LMCD1-206ENST00000456506 TAMM41Q96BW9 452 aa10.03□□□□□ -0.8
LMCD1-206ENST00000456506 TIMD4Q96H15 378 aa10.03□□□□□ -0.8
LMCD1-206ENST00000456506 MPP4Q96JB8 637 aa10.03□□□□□ -0.8
LMCD1-206ENST00000456506 MAGEB18Q96M61 343 aa10.03□□□□□ -0.8
LMCD1-206ENST00000456506 DUX5Q96PT3 197 aa10.03□□□□□ -0.8
LMCD1-206ENST00000456506 SIGLEC11Q96RL6 698 aa10.03□□□□□ -0.8
LMCD1-206ENST00000456506 OR2J1Q9GZK6 312 aa10.03□□□□□ -0.8
LMCD1-206ENST00000456506 SIAEQ9HAT2 523 aa10.03□□□□□ -0.8
LMCD1-206ENST00000456506 PLEK2Q9NYT0 353 aa10.03□□□□□ -0.8
LMCD1-206ENST00000456506 PURGQ9UJV8 347 aaKnown RBP10.03□□□□□ -0.8
LMCD1-206ENST00000456506 NUP50Q9UKX7 468 aa10.03□□□□□ -0.8
LMCD1-206ENST00000456506 SLC7A7Q9UM01 511 aa10.03□□□□□ -0.8
LMCD1-206ENST00000456506 TRAPPC13A5PLN9 417 aa10.02□□□□□ -0.81
LMCD1-206ENST00000456506 CLDN34H7C241 214 aa10.02□□□□□ -0.81
LMCD1-206ENST00000456506 FOXH1O75593 365 aa10.02□□□□□ -0.81
LMCD1-206ENST00000456506 MT-ND5P03915 603 aa10.02□□□□□ -0.81
LMCD1-206ENST00000456506 DRD4P21917 467 aa10.02□□□□□ -0.81
LMCD1-206ENST00000456506 CDAP32320 146 aa10.02□□□□□ -0.81
LMCD1-206ENST00000456506 APLNRP35414 380 aa10.02□□□□□ -0.81
LMCD1-206ENST00000456506 SLC6A9P48067 706 aa10.02□□□□□ -0.81
LMCD1-206ENST00000456506 GZMMP51124 257 aa10.02□□□□□ -0.81
LMCD1-206ENST00000456506 ATP4BP51164 291 aa10.02□□□□□ -0.81
LMCD1-206ENST00000456506 CLRN1P58418 232 aa10.02□□□□□ -0.81
LMCD1-206ENST00000456506 PSG4Q00888 419 aa10.02□□□□□ -0.81
LMCD1-206ENST00000456506 GUCY1A3Q02108 690 aa10.02□□□□□ -0.81
LMCD1-206ENST00000456506 FMODQ06828 376 aa10.02□□□□□ -0.81
LMCD1-206ENST00000456506 ZNF154Q13106 437 aa10.02□□□□□ -0.81
LMCD1-206ENST00000456506 CDK5R2Q13319 367 aa10.02□□□□□ -0.81
LMCD1-206ENST00000456506 MOGQ16653 247 aa10.02□□□□□ -0.81
LMCD1-206ENST00000456506 ZNF718Q3SXZ3 478 aa10.02□□□□□ -0.81
LMCD1-206ENST00000456506 TREML4Q6UXN2 200 aa10.02□□□□□ -0.81
LMCD1-206ENST00000456506 FOXL2NBQ6ZUU3 175 aa10.02□□□□□ -0.81
LMCD1-206ENST00000456506 ICA1LQ8NDH6 482 aa10.02□□□□□ -0.81
LMCD1-206ENST00000456506 AKR7LQ8NHP1 331 aa10.02□□□□□ -0.81
LMCD1-206ENST00000456506 WNT5BQ9H1J7 359 aa10.02□□□□□ -0.81
LMCD1-206ENST00000456506 UNKLQ9H9P5 680 aaKnown RBP10.02□□□□□ -0.81
LMCD1-206ENST00000456506 ZMAT3Q9HA38 289 aaKnown RBP10.02□□□□□ -0.81
LMCD1-206ENST00000456506 SMURF2Q9HAU4 748 aa10.02□□□□□ -0.81
LMCD1-206ENST00000456506 C20orf141Q9NUB4 165 aa10.02□□□□□ -0.81
LMCD1-206ENST00000456506 CORO2BQ9UQ03 480 aa10.02□□□□□ -0.81
LMCD1-206ENST00000456506 ANGPT4Q9Y264 503 aa10.02□□□□□ -0.81
LMCD1-206ENST00000456506 INSIG2Q9Y5U4 225 aa10.02□□□□□ -0.81
LMCD1-206ENST00000456506 NPTNQ9Y639 398 aa10.02□□□□□ -0.81
LMCD1-206ENST00000456506 SOX21Q9Y651 276 aaPredicted RBP10.02□□□□□ -0.81
LMCD1-206ENST00000456506 NPIPB13A6NJU9 1138 aa10.01□□□□□ -0.81
LMCD1-206ENST00000456506 NPIPB4C9JG80 1138 aa10.01□□□□□ -0.81
LMCD1-206ENST00000456506 H3BSA7 217 aa10.01□□□□□ -0.81
LMCD1-206ENST00000456506 TPD52L2O43399 206 aaKnown RBP10.01□□□□□ -0.81
LMCD1-206ENST00000456506 IGF2P01344 180 aa10.01□□□□□ -0.81
LMCD1-206ENST00000456506 IGHMP01871 453 aa10.01□□□□□ -0.81
LMCD1-206ENST00000456506 MT-ND1P03886 318 aa10.01□□□□□ -0.81
LMCD1-206ENST00000456506 AQP2P41181 271 aa10.01□□□□□ -0.81
LMCD1-206ENST00000456506 ZNF84P51523 738 aa10.01□□□□□ -0.81
LMCD1-206ENST00000456506 CBX1P83916 185 aa10.01□□□□□ -0.81
LMCD1-206ENST00000456506 DEFA6Q01524 100 aa10.01□□□□□ -0.81
LMCD1-206ENST00000456506 PLP2Q04941 152 aa10.01□□□□□ -0.81
LMCD1-206ENST00000456506 FAM27BQ5VT28 67 aa10.01□□□□□ -0.81
LMCD1-206ENST00000456506 SLC25A47Q6Q0C1 308 aa10.01□□□□□ -0.81
LMCD1-206ENST00000456506 Q6ZR03 302 aa10.01□□□□□ -0.81
LMCD1-206ENST00000456506 C9orf139Q6ZV77 190 aa10.01□□□□□ -0.81
LMCD1-206ENST00000456506 NANOGNBQ7Z5D8 188 aa10.01□□□□□ -0.81
LMCD1-206ENST00000456506 NKAIN4Q8IVV8 208 aa10.01□□□□□ -0.81
LMCD1-206ENST00000456506 ZNF283Q8N7M2 679 aa10.01□□□□□ -0.81
LMCD1-206ENST00000456506 C11orf65Q8NCR3 313 aa10.01□□□□□ -0.81
LMCD1-206ENST00000456506 MOSPD2Q8NHP6 518 aa10.01□□□□□ -0.81
LMCD1-206ENST00000456506 PFN4Q8NHR9 129 aa10.01□□□□□ -0.81
LMCD1-206ENST00000456506 VANGL1Q8TAA9 524 aaPredicted RBP10.01□□□□□ -0.81
LMCD1-206ENST00000456506 C7orf26Q96N11 449 aa10.01□□□□□ -0.81
LMCD1-206ENST00000456506 CCDC28BQ9BUN5 200 aa10.01□□□□□ -0.81
LMCD1-206ENST00000456506 LRMDAQ9H2I8 198 aa10.01□□□□□ -0.81
LMCD1-206ENST00000456506 POFUT1Q9H488 388 aa10.01□□□□□ -0.81
LMCD1-206ENST00000456506 PATZ1Q9HBE1 687 aaKnown RBP10.01□□□□□ -0.81
LMCD1-206ENST00000456506 MSL2Q9HCI7 577 aa10.01□□□□□ -0.81
LMCD1-206ENST00000456506 UBAP1Q9NZ09 502 aa10.01□□□□□ -0.81
LMCD1-206ENST00000456506 CGGBP1Q9UFW8 167 aaPredicted RBP10.01□□□□□ -0.81
LMCD1-206ENST00000456506 SLC13A4Q9UKG4 626 aa10.01□□□□□ -0.81
LMCD1-206ENST00000456506 ZDHHC8Q9ULC8 765 aa10.01□□□□□ -0.81
LMCD1-206ENST00000456506 NOTCH1P46531 2555 aa10.01□□□□□ -0.81
LMCD1-206ENST00000456506 C5orf49A4QMS7 147 aa10□□□□□ -0.81
LMCD1-206ENST00000456506 EVPLLA8MZ36 301 aa10□□□□□ -0.81
LMCD1-206ENST00000456506 BLOC1S5-TXNDC5H3BN57 136 aa10□□□□□ -0.81
LMCD1-206ENST00000456506 RRP9O43818 475 aaKnown RBP10□□□□□ -0.81
LMCD1-206ENST00000456506 OR7A10O76100 309 aa10□□□□□ -0.81
LMCD1-206ENST00000456506 TGDSO95455 350 aa10□□□□□ -0.81
LMCD1-206ENST00000456506 CCNOP22674 350 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms