RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 DAPP1Q9UN19 280 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 RPH3AQ9Y2J0 694 aaPredicted RBP9.32□□□□□ -0.92
CLIP4-208ENST00000456385 INSL6Q9Y581 213 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 CHD7Q9P2D1 2997 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 C9orf170A2RU37 121 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 C5orf51A6NDU8 294 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 SLC17A2O00624 439 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 UBE2CO00762 179 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 TXNL1O43396 289 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 IGHV2-70P01814 119 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 S100A8P05109 93 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 F13BP05160 661 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 APEHP13798 732 aaKnown RBP9.32□□□□□ -0.92
CLIP4-208ENST00000456385 PGDP52209 483 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 CXADRP78310 365 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 FABP9Q0Z7S8 132 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 PJVKQ0ZLH3 352 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 ELOCQ15369 112 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 DHCR24Q15392 516 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 ZNF77Q15935 545 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 TMEM52BQ4KMG9 183 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 WDR38Q5JTN6 314 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 LYG2Q86SG7 212 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 CDC20BQ86Y33 519 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 ADAD2Q8NCV1 583 aaKnown RBP9.32□□□□□ -0.92
CLIP4-208ENST00000456385 OR5T3Q8NGG3 340 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 FAM174AQ8TBP5 190 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 FOXRED1Q96CU9 486 aaPredicted RBP9.32□□□□□ -0.92
CLIP4-208ENST00000456385 FOXN4Q96NZ1 517 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 LMAN2LQ9H0V9 348 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 CGGBP1Q9UFW8 167 aaPredicted RBP9.32□□□□□ -0.92
CLIP4-208ENST00000456385 GTF2A1LQ9UNN4 478 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 SLC22A13Q9Y226 551 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 PCDHGA1Q9Y5H4 931 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 MRPS18BQ9Y676 258 aaKnown RBP9.32□□□□□ -0.92
CLIP4-208ENST00000456385 COL4A6Q14031 1691 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 MYO15AQ9UKN7 3530 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 MSGN1A6NI15 193 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 TMEM212A6NML5 194 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 TTLL8A6PVC2 850 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 PQBP1O60828 265 aaKnown RBP9.31□□□□□ -0.92
CLIP4-208ENST00000456385 LILRB3O75022 631 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 AKR1C4P17516 323 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 CMPK1P30085 196 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 SSBP1Q04837 148 aaKnown RBP9.31□□□□□ -0.92
CLIP4-208ENST00000456385 EIF2B1Q14232 305 aaKnown RBP9.31□□□□□ -0.92
CLIP4-208ENST00000456385 HNRNPA1L2Q32P51 320 aaKnown RBP9.31□□□□□ -0.92
CLIP4-208ENST00000456385 CDNFQ49AH0 187 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 ACER2Q5QJU3 275 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 GLYATL3Q5SZD4 288 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 OR52W1Q6IF63 320 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 DGAT2L6Q6ZPD8 337 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 SLC25A42Q86VD7 318 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 JAZF1Q86VZ6 243 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 PARGQ86W56 976 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 SLC43A2Q8N370 569 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 GVQW1Q8N7I0 195 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 ZSCAN4Q8NAM6 433 aaPredicted RBP9.31□□□□□ -0.92
CLIP4-208ENST00000456385 KREMEN2Q8NCW0 462 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 MITD1Q8WV92 249 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 STACQ99469 402 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 RSRP1Q9BUV0 290 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 RNF126Q9BV68 326 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 OR51M1Q9H341 326 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 RNF122Q9H9V4 155 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 SEBOXQ9HB31 216 aaPredicted RBP9.31□□□□□ -0.92
CLIP4-208ENST00000456385 CHMP1AQ9HD42 196 aaPredicted RBP9.31□□□□□ -0.92
CLIP4-208ENST00000456385 MYOZ1Q9NP98 299 aaPredicted RBP9.31□□□□□ -0.92
CLIP4-208ENST00000456385 FBXL21Q9UKT6 434 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 MRPS2Q9Y399 296 aaKnown RBP9.31□□□□□ -0.92
CLIP4-208ENST00000456385 ARID1BQ8NFD5 2236 aaPredicted RBP9.31□□□□□ -0.92
CLIP4-208ENST00000456385 TEX13DA0A0J9YY54 714 aaPredicted RBP9.31□□□□□ -0.92
CLIP4-208ENST00000456385 C1orf196B1AJZ1 125 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 H0YIZ8 118 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 YKT6O15498 198 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 DOK2O60496 412 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 RDH16O75452 317 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 CRHP06850 196 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 CD14P08571 375 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 PSMB6P28072 239 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 MAP3K8P41279 467 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 ADAM8P78325 824 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 ELAVL3Q14576 367 aaKnown RBP9.31□□□□□ -0.92
CLIP4-208ENST00000456385 ALG11Q2TAA5 492 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 PRICKLE4Q2TBC4 344 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 FBXO42Q6P3S6 717 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 PAPD4Q6PIY7 484 aaKnown RBP9.31□□□□□ -0.92
CLIP4-208ENST00000456385 SLC35D2Q76EJ3 337 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 EXD3Q8N9H8 876 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 HIST1H2BAQ96A08 127 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 DNAJA3Q96EY1 480 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 SLC41A2Q96JW4 573 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 PHB2Q99623 299 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 OR2S2Q9NQN1 319 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 SLC22A7Q9Y694 548 aa9.31□□□□□ -0.92
CLIP4-208ENST00000456385 TRPM6Q9BX84 2022 aa9.3□□□□□ -0.92
CLIP4-208ENST00000456385 DCDC2BA2VCK2 349 aa9.3□□□□□ -0.92
CLIP4-208ENST00000456385 RNASEK-C17orf49H0YIS7 233 aa9.3□□□□□ -0.92
CLIP4-208ENST00000456385 AK1P00568 194 aa9.3□□□□□ -0.92
CLIP4-208ENST00000456385 ERCC1P07992 297 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms