RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 CPOQ8IVL8 374 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 CLIP4Q8N3C7 705 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 OR1F2PQ96R84 312 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 ZNF160Q9HCG1 818 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 DMRT3Q9NQL9 472 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 LRIT1Q9P2V4 623 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 OR6C68A6NDL8 312 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 DDTLA6NHG4 134 aaPredicted RBP4.81□□□□□ -1.64
CSMD3-204ENST00000455883 MPDU1O75352 247 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 STBD1O95210 358 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 OR5AC1P0C628 307 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 GDF10P55107 478 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 SLC22A6Q4U2R8 563 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 CRTC1Q6UUV9 634 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 ZNF573Q86YE8 665 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 EGLN2Q96KS0 407 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 BPIFA1Q9NP55 256 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 USP9YO00507 2555 aaPredicted RBP4.81□□□□□ -1.64
CSMD3-204ENST00000455883 NYNRINQ9P2P1 1898 aaKnown RBP4.81□□□□□ -1.64
CSMD3-204ENST00000455883 OR6C76A6NM76 312 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 TMEM225BP0DP42 221 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 DRD1P21728 446 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 FBLP22087 321 aaKnown RBP4.81□□□□□ -1.64
CSMD3-204ENST00000455883 C17orf67Q0P5P2 114 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 SMIM21Q3B7S5 101 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 PSAPL1Q6NUJ1 521 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 KLHDC8AQ8IYD2 350 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 OR5K2Q8NHB8 316 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 SLC35A4Q96G79 324 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 OR52D1Q9H346 318 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 PRSS16Q9NQE7 514 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 OSGIN1Q9UJX0 560 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 RARRES3Q9UL19 164 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 COL16A1Q07092 1604 aaPredicted RBP4.81□□□□□ -1.64
CSMD3-204ENST00000455883 ANTXRLA6NF34 631 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 HIDE1A8MVS5 230 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 M0R296 226 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 ZNF749O43361 778 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 MGAMO43451 1857 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 GJB3O75712 270 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 CFHP08603 1231 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 NPBWR1P48145 328 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 SERF2P84101 59 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 FAM180BQ6P0A1 224 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 NUFIP2Q7Z417 695 aaKnown RBP4.81□□□□□ -1.64
CSMD3-204ENST00000455883 SLC38A9Q8NBW4 561 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 OR13C9Q8NGT0 318 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 CD99L2Q8TCZ2 262 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 SPSB1Q96BD6 273 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 C14orf79Q96F83 325 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 NRLP54845 237 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 CLDN15P56746 228 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 CSNK1G2P78368 415 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 VGLL4Q14135 290 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 ATXN7L3Q14CW9 347 aaPredicted RBP4.81□□□□□ -1.64
CSMD3-204ENST00000455883 SGCAQ16586 387 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 SLC35E1Q96K37 410 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 ALX4Q9H161 411 aaPredicted RBP4.81□□□□□ -1.64
CSMD3-204ENST00000455883 GCM1Q9NP62 436 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 GFRA2O00451 464 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 PDE6DO43924 150 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 GLCEO94923 617 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 PAPLNO95428 1278 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 CPMP14384 443 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 TEAD1P28347 426 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 APOBEC1P41238 236 aaKnown RBP4.81□□□□□ -1.64
CSMD3-204ENST00000455883 HERVK_113P61574 105 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 RPE65Q16518 533 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 ISXQ2M1V0 245 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 LRRC37A5PQ49AS3 106 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 FFAR4Q5NUL3 377 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 TMPRSS11FQ6ZWK6 438 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 TEX29Q8N6K0 151 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 KREMEN2Q8NCW0 462 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 ZNF439Q8NDP4 499 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 OR6K2Q8NGY2 324 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 TRAV36DV7A0A075B6V5 113 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 TMEM269A0A1B0GVZ9 245 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 CLDN34H7C241 214 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 ZNF728P0DKX0 622 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 OR12D1P0DN82 309 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 MMP9P14780 707 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 TCL1AP56279 114 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 PMCHL1Q16048 86 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 CLEC12BQ2HXU8 276 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 SIAH3Q8IW03 269 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 OR4A16Q8NH70 328 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 KLHDC7BQ96G42 594 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 GAS2L1Q99501 681 aaPredicted RBP4.81□□□□□ -1.64
CSMD3-204ENST00000455883 ARHGDIGQ99819 225 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 ERVMER34-1Q9H9K5 563 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 POU2F3Q9UKI9 436 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 NOTCH4Q99466 2003 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 CDK2AP1O14519 115 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 ST6GAL1P15907 406 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 MEOX2P50222 304 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 NSDHLQ15738 373 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 ASB11Q8WXH4 323 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 KLRG1Q96E93 195 aa4.81□□□□□ -1.64
CSMD3-204ENST00000455883 BSCL2Q96G97 398 aaPredicted RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms