RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 PARP8Q8N3A8 854 aa24.3■■□□□ 1.48
SMARCC1-203ENST00000454240 ZNF611Q8N823 705 aa24.3■■□□□ 1.48
SMARCC1-203ENST00000454240 IL17RDQ8NFM7 739 aa24.3■■□□□ 1.48
SMARCC1-203ENST00000454240 FBXO17Q96EF6 278 aa24.3■■□□□ 1.48
SMARCC1-203ENST00000454240 RERGLQ9H628 205 aa24.3■■□□□ 1.48
SMARCC1-203ENST00000454240 RNF121Q9H920 327 aa24.3■■□□□ 1.48
SMARCC1-203ENST00000454240 S100A14Q9HCY8 104 aa24.3■■□□□ 1.48
SMARCC1-203ENST00000454240 SRA1Q9HD15 236 aaKnown RBP24.3■■□□□ 1.48
SMARCC1-203ENST00000454240 RPRD1BQ9NQG5 326 aaKnown RBP24.3■■□□□ 1.48
SMARCC1-203ENST00000454240 FBXL3Q9UKT7 428 aa24.3■■□□□ 1.48
SMARCC1-203ENST00000454240 OAZ3Q9UMX2 235 aa24.3■■□□□ 1.48
SMARCC1-203ENST00000454240 FKBP7Q9Y680 259 aa24.3■■□□□ 1.48
SMARCC1-203ENST00000454240 CRYAAP02489 173 aa24.29■■□□□ 1.48
SMARCC1-203ENST00000454240 SERPINA5P05154 406 aa24.29■■□□□ 1.48
SMARCC1-203ENST00000454240 POU1F1P28069 291 aa24.29■■□□□ 1.48
SMARCC1-203ENST00000454240 CDK5Q00535 292 aa24.29■■□□□ 1.48
SMARCC1-203ENST00000454240 ENDOGQ14249 297 aaKnown RBP24.29■■□□□ 1.48
SMARCC1-203ENST00000454240 RAB39AQ14964 217 aa24.29■■□□□ 1.48
SMARCC1-203ENST00000454240 KDM4DQ6B0I6 523 aa24.29■■□□□ 1.48
SMARCC1-203ENST00000454240 SLC27A4Q6P1M0 643 aa24.29■■□□□ 1.48
SMARCC1-203ENST00000454240 C20orf204Q6ZNR8 217 aa24.29■■□□□ 1.48
SMARCC1-203ENST00000454240 ZNF584Q8IVC4 421 aa24.29■■□□□ 1.48
SMARCC1-203ENST00000454240 SLC37A3Q8NCC5 494 aa24.29■■□□□ 1.48
SMARCC1-203ENST00000454240 MS4A3Q96HJ5 214 aa24.29■■□□□ 1.48
SMARCC1-203ENST00000454240 FOXN4Q96NZ1 517 aa24.29■■□□□ 1.48
SMARCC1-203ENST00000454240 RACGAP1Q9H0H5 632 aa24.29■■□□□ 1.48
SMARCC1-203ENST00000454240 CISD1Q9NZ45 108 aaKnown RBP24.29■■□□□ 1.48
SMARCC1-203ENST00000454240 KLHL21Q9UJP4 597 aa24.29■■□□□ 1.48
SMARCC1-203ENST00000454240 PLCE1Q9P212 2302 aa24.29■■□□□ 1.48
SMARCC1-203ENST00000454240 ATP6V1G2-DDX39BF2Z307 99 aa24.28■■□□□ 1.48
SMARCC1-203ENST00000454240 RAF1P04049 648 aa24.28■■□□□ 1.48
SMARCC1-203ENST00000454240 CALCRP30988 508 aa24.28■■□□□ 1.48
SMARCC1-203ENST00000454240 GRK5P34947 590 aa24.28■■□□□ 1.48
SMARCC1-203ENST00000454240 CDH11P55287 796 aa24.28■■□□□ 1.48
SMARCC1-203ENST00000454240 GINS1Q14691 196 aa24.28■■□□□ 1.48
SMARCC1-203ENST00000454240 ACSM5Q6NUN0 579 aa24.28■■□□□ 1.48
SMARCC1-203ENST00000454240 UGT2A3Q6UWM9 527 aa24.28■■□□□ 1.48
SMARCC1-203ENST00000454240 IQCF1Q8N6M8 205 aa24.28■■□□□ 1.48
SMARCC1-203ENST00000454240 CYB561A3Q8NBI2 242 aa24.28■■□□□ 1.48
SMARCC1-203ENST00000454240 NINJ1Q92982 152 aa24.28■■□□□ 1.48
SMARCC1-203ENST00000454240 FBXW5Q969U6 566 aa24.28■■□□□ 1.48
SMARCC1-203ENST00000454240 KCNS3Q9BQ31 491 aa24.28■■□□□ 1.48
SMARCC1-203ENST00000454240 ZNF416Q9BWM5 594 aa24.28■■□□□ 1.48
SMARCC1-203ENST00000454240 FN3KQ9H479 309 aa24.28■■□□□ 1.48
SMARCC1-203ENST00000454240 CMC2Q9NRP2 79 aa24.28■■□□□ 1.48
SMARCC1-203ENST00000454240 PLEKHA6Q9Y2H5 1048 aa24.28■■□□□ 1.48
SMARCC1-203ENST00000454240 E7EQL1 145 aa24.27■■□□□ 1.48
SMARCC1-203ENST00000454240 ATE1O95260 518 aa24.27■■□□□ 1.48
SMARCC1-203ENST00000454240 ZNF32P17041 273 aa24.27■■□□□ 1.48
SMARCC1-203ENST00000454240 DBPQ10586 325 aaPredicted RBP24.27■■□□□ 1.48
SMARCC1-203ENST00000454240 KCNMB1Q16558 191 aa24.27■■□□□ 1.48
SMARCC1-203ENST00000454240 B3GLCTQ6Y288 498 aa24.27■■□□□ 1.48
SMARCC1-203ENST00000454240 SYT9Q86SS6 491 aa24.27■■□□□ 1.48
SMARCC1-203ENST00000454240 ICA1LQ8NDH6 482 aa24.27■■□□□ 1.48
SMARCC1-203ENST00000454240 WACQ9BTA9 647 aa24.27■■□□□ 1.48
SMARCC1-203ENST00000454240 RBM4Q9BWF3 364 aaKnown RBP24.27■■□□□ 1.48
SMARCC1-203ENST00000454240 EMC7Q9NPA0 242 aa24.27■■□□□ 1.48
SMARCC1-203ENST00000454240 CCNB1IP1Q9NPC3 277 aa24.27■■□□□ 1.48
SMARCC1-203ENST00000454240 KRT84Q9NSB2 600 aa24.27■■□□□ 1.48
SMARCC1-203ENST00000454240 POU2F3Q9UKI9 436 aa24.27■■□□□ 1.48
SMARCC1-203ENST00000454240 IGHV2OR16-5A0A0B4J2B6 119 aa24.26■■□□□ 1.47
SMARCC1-203ENST00000454240 MPZL1O95297 269 aa24.26■■□□□ 1.47
SMARCC1-203ENST00000454240 GAAP10253 952 aa24.26■■□□□ 1.47
SMARCC1-203ENST00000454240 CD53P19397 219 aa24.26■■□□□ 1.47
SMARCC1-203ENST00000454240 CRISP1P54107 249 aa24.26■■□□□ 1.47
SMARCC1-203ENST00000454240 LSM6P62312 80 aaKnown RBP24.26■■□□□ 1.47
SMARCC1-203ENST00000454240 CRMP1Q14194 572 aa24.26■■□□□ 1.47
SMARCC1-203ENST00000454240 SLC25A19Q9HC21 320 aa24.26■■□□□ 1.47
SMARCC1-203ENST00000454240 ATP23Q9Y6H3 246 aa24.26■■□□□ 1.47
SMARCC1-203ENST00000454240 TEX15Q9BXT5 2789 aa24.25■■□□□ 1.47
SMARCC1-203ENST00000454240 SAC3D1A6NKF1 404 aa24.25■■□□□ 1.47
SMARCC1-203ENST00000454240 C12orf71A8MTZ7 269 aa24.25■■□□□ 1.47
SMARCC1-203ENST00000454240 GPANK1O95872 356 aa24.25■■□□□ 1.47
SMARCC1-203ENST00000454240 IFNGP01579 166 aa24.25■■□□□ 1.47
SMARCC1-203ENST00000454240 DANCRP0C864 163 aa24.25■■□□□ 1.47
SMARCC1-203ENST00000454240 ZNF35P13682 527 aa24.25■■□□□ 1.47
SMARCC1-203ENST00000454240 PCBD1P61457 104 aa24.25■■□□□ 1.47
SMARCC1-203ENST00000454240 ESRRGP62508 458 aa24.25■■□□□ 1.47
SMARCC1-203ENST00000454240 KEAP1Q14145 624 aa24.25■■□□□ 1.47
SMARCC1-203ENST00000454240 IGFBPL1Q8WX77 278 aa24.25■■□□□ 1.47
SMARCC1-203ENST00000454240 C11orf40Q8WZ69 217 aa24.25■■□□□ 1.47
SMARCC1-203ENST00000454240 OSBPL10Q9BXB5 764 aa24.25■■□□□ 1.47
SMARCC1-203ENST00000454240 NMNAT2Q9BZQ4 307 aa24.25■■□□□ 1.47
SMARCC1-203ENST00000454240 TMEFF2Q9UIK5 374 aaPredicted RBP24.25■■□□□ 1.47
SMARCC1-203ENST00000454240 TIMM10BQ9Y5J6 103 aa24.25■■□□□ 1.47
SMARCC1-203ENST00000454240 NAV2Q8IVL1 2488 aa24.25■■□□□ 1.47
SMARCC1-203ENST00000454240 RIIAD1A6NNX1 92 aa24.24■■□□□ 1.47
SMARCC1-203ENST00000454240 ANKRD65E5RJM6 399 aa24.24■■□□□ 1.47
SMARCC1-203ENST00000454240 MITFO75030 526 aaPredicted RBP24.24■■□□□ 1.47
SMARCC1-203ENST00000454240 PTHP01270 115 aa24.24■■□□□ 1.47
SMARCC1-203ENST00000454240 DNASE1P24855 282 aa24.24■■□□□ 1.47
SMARCC1-203ENST00000454240 SLC25A1P53007 311 aa24.24■■□□□ 1.47
SMARCC1-203ENST00000454240 PPP2R2BQ00005 443 aa24.24■■□□□ 1.47
SMARCC1-203ENST00000454240 PSG4Q00888 419 aa24.24■■□□□ 1.47
SMARCC1-203ENST00000454240 HSF2Q03933 536 aa24.24■■□□□ 1.47
SMARCC1-203ENST00000454240 HGFACQ04756 655 aa24.24■■□□□ 1.47
SMARCC1-203ENST00000454240 GLO1Q04760 184 aa24.24■■□□□ 1.47
SMARCC1-203ENST00000454240 PLP2Q04941 152 aa24.24■■□□□ 1.47
SMARCC1-203ENST00000454240 PABPC1L2AQ5JQF8 200 aa24.24■■□□□ 1.47
SMARCC1-203ENST00000454240 OR4F15Q8NGB8 312 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms