RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 LGALS3BPQ08380 585 aa15.7■□□□□ 0.1
SQSTM1-204ENST00000453046 CD47Q08722 323 aa15.7■□□□□ 0.1
SQSTM1-204ENST00000453046 MAD2L1BPQ15013 274 aaPredicted RBP15.7■□□□□ 0.1
SQSTM1-204ENST00000453046 ALG10Q5BKT4 473 aa15.7■□□□□ 0.1
SQSTM1-204ENST00000453046 B3GLCTQ6Y288 498 aa15.7■□□□□ 0.1
SQSTM1-204ENST00000453046 DPY19L2P2Q6ZN68 376 aa15.7■□□□□ 0.1
SQSTM1-204ENST00000453046 ENTHD1Q8IYW4 607 aa15.7■□□□□ 0.1
SQSTM1-204ENST00000453046 LRRC75AQ8NAA5 344 aa15.7■□□□□ 0.1
SQSTM1-204ENST00000453046 OR8J1Q8NGP2 316 aa15.7■□□□□ 0.1
SQSTM1-204ENST00000453046 OR1K1Q8NGR3 316 aa15.7■□□□□ 0.1
SQSTM1-204ENST00000453046 OXGR1Q96P68 337 aa15.7■□□□□ 0.1
SQSTM1-204ENST00000453046 KCNS3Q9BQ31 491 aa15.7■□□□□ 0.1
SQSTM1-204ENST00000453046 RHNO1Q9BSD3 238 aa15.7■□□□□ 0.1
SQSTM1-204ENST00000453046 IFT27Q9BW83 186 aa15.7■□□□□ 0.1
SQSTM1-204ENST00000453046 OBP2BQ9NPH6 170 aa15.7■□□□□ 0.1
SQSTM1-204ENST00000453046 PLCE1Q9P212 2302 aa15.69■□□□□ 0.1
SQSTM1-204ENST00000453046 ATP6V1G2-DDX39BF2Z307 99 aa15.69■□□□□ 0.1
SQSTM1-204ENST00000453046 ARPC3O15145 178 aa15.69■□□□□ 0.1
SQSTM1-204ENST00000453046 SLC43A1O75387 559 aa15.69■□□□□ 0.1
SQSTM1-204ENST00000453046 UPK3AO75631 287 aa15.69■□□□□ 0.1
SQSTM1-204ENST00000453046 CD14P08571 375 aa15.69■□□□□ 0.1
SQSTM1-204ENST00000453046 RPL4P36578 427 aaKnown RBP15.69■□□□□ 0.1
SQSTM1-204ENST00000453046 AQP2P41181 271 aa15.69■□□□□ 0.1
SQSTM1-204ENST00000453046 PMS2P3Q13401 168 aa15.69■□□□□ 0.1
SQSTM1-204ENST00000453046 TBRG1Q3YBR2 411 aa15.69■□□□□ 0.1
SQSTM1-204ENST00000453046 C11orf71Q6IPW1 123 aa15.69■□□□□ 0.1
SQSTM1-204ENST00000453046 ACSM5Q6NUN0 579 aa15.69■□□□□ 0.1
SQSTM1-204ENST00000453046 UGT2A3Q6UWM9 527 aa15.69■□□□□ 0.1
SQSTM1-204ENST00000453046 MOSPD2Q8NHP6 518 aa15.69■□□□□ 0.1
SQSTM1-204ENST00000453046 LINC00470Q9BZP3 86 aa15.69■□□□□ 0.1
SQSTM1-204ENST00000453046 HEATR1Q9H583 2144 aaKnown RBP15.69■□□□□ 0.1
SQSTM1-204ENST00000453046 SEC14L4Q9UDX3 406 aa15.69■□□□□ 0.1
SQSTM1-204ENST00000453046 MOKQ9UQ07 419 aa15.69■□□□□ 0.1
SQSTM1-204ENST00000453046 NPIPB13A6NJU9 1138 aa15.68■□□□□ 0.1
SQSTM1-204ENST00000453046 NPIPB4C9JG80 1138 aa15.68■□□□□ 0.1
SQSTM1-204ENST00000453046 MCIDASD6RGH6 385 aa15.68■□□□□ 0.1
SQSTM1-204ENST00000453046 BLOC1S5-TXNDC5H3BN57 136 aa15.68■□□□□ 0.1
SQSTM1-204ENST00000453046 PLPP3O14495 311 aa15.68■□□□□ 0.1
SQSTM1-204ENST00000453046 SURF4O15260 269 aa15.68■□□□□ 0.1
SQSTM1-204ENST00000453046 AKAP8O43823 692 aaKnown RBP15.68■□□□□ 0.1
SQSTM1-204ENST00000453046 IDH3BO43837 385 aa15.68■□□□□ 0.1
SQSTM1-204ENST00000453046 OR6A2O95222 327 aa15.68■□□□□ 0.1
SQSTM1-204ENST00000453046 PPP1R3DO95685 299 aa15.68■□□□□ 0.1
SQSTM1-204ENST00000453046 IGHMP01871 453 aa15.68■□□□□ 0.1
SQSTM1-204ENST00000453046 GABRB1P18505 474 aa15.68■□□□□ 0.1
SQSTM1-204ENST00000453046 PAX7P23759 505 aa15.68■□□□□ 0.1
SQSTM1-204ENST00000453046 APOBEC3AP31941 199 aaPredicted RBP15.68■□□□□ 0.1
SQSTM1-204ENST00000453046 CHN2P52757 468 aa15.68■□□□□ 0.1
SQSTM1-204ENST00000453046 SNRPGP62308 76 aaKnown RBP15.68■□□□□ 0.1
SQSTM1-204ENST00000453046 MYBPC1Q00872 1141 aa15.68■□□□□ 0.1
SQSTM1-204ENST00000453046 ROR2Q01974 943 aaKnown RBP15.68■□□□□ 0.1
SQSTM1-204ENST00000453046 PUDPQ08623 228 aa15.68■□□□□ 0.1
SQSTM1-204ENST00000453046 ZP4Q12836 540 aa15.68■□□□□ 0.1
SQSTM1-204ENST00000453046 H1FNTQ75WM6 255 aaPredicted RBP15.68■□□□□ 0.1
SQSTM1-204ENST00000453046 GPR137CQ8N3F9 429 aa15.68■□□□□ 0.1
SQSTM1-204ENST00000453046 HTRA1Q92743 480 aa15.68■□□□□ 0.1
SQSTM1-204ENST00000453046 BOD1Q96IK1 185 aa15.68■□□□□ 0.1
SQSTM1-204ENST00000453046 NRIP3Q9NQ35 241 aa15.68■□□□□ 0.1
SQSTM1-204ENST00000453046 TVP23BQ9NYZ1 205 aa15.68■□□□□ 0.1
SQSTM1-204ENST00000453046 IL20RAQ9UHF4 553 aa15.68■□□□□ 0.1
SQSTM1-204ENST00000453046 RCE1Q9Y256 329 aa15.68■□□□□ 0.1
SQSTM1-204ENST00000453046 PMF1-BGLAPU3KQ54 211 aa15.68■□□□□ 0.1
SQSTM1-204ENST00000453046 JMJD1CQ15652 2540 aa15.68■□□□□ 0.1
SQSTM1-204ENST00000453046 A0A096LPE4 126 aa15.67■□□□□ 0.1
SQSTM1-204ENST00000453046 A0A1W2PPZ6 126 aa15.67■□□□□ 0.1
SQSTM1-204ENST00000453046 IMPA2O14732 288 aa15.67■□□□□ 0.1
SQSTM1-204ENST00000453046 IFNGP01579 166 aa15.67■□□□□ 0.1
SQSTM1-204ENST00000453046 ADORA3P0DMS8 318 aa15.67■□□□□ 0.1
SQSTM1-204ENST00000453046 SH3BGRP55822 239 aaPredicted RBP15.67■□□□□ 0.1
SQSTM1-204ENST00000453046 SNAPC1Q16533 368 aa15.67■□□□□ 0.1
SQSTM1-204ENST00000453046 GPR139Q6DWJ6 353 aa15.67■□□□□ 0.1
SQSTM1-204ENST00000453046 ANKRD16Q6P6B7 361 aa15.67■□□□□ 0.1
SQSTM1-204ENST00000453046 CLEC2AQ6UVW9 174 aa15.67■□□□□ 0.1
SQSTM1-204ENST00000453046 PTCHD4Q6ZW05 846 aa15.67■□□□□ 0.1
SQSTM1-204ENST00000453046 LINGO2Q7L985 606 aa15.67■□□□□ 0.1
SQSTM1-204ENST00000453046 ANKK1Q8NFD2 765 aa15.67■□□□□ 0.1
SQSTM1-204ENST00000453046 RHOXF1Q8NHV9 184 aa15.67■□□□□ 0.1
SQSTM1-204ENST00000453046 TMEM163Q8TC26 289 aa15.67■□□□□ 0.1
SQSTM1-204ENST00000453046 HDAC2Q92769 488 aaKnown RBP15.67■□□□□ 0.1
SQSTM1-204ENST00000453046 BCL2L2Q92843 193 aaPredicted RBP15.67■□□□□ 0.1
SQSTM1-204ENST00000453046 ZNF566Q969W8 418 aa15.67■□□□□ 0.1
SQSTM1-204ENST00000453046 PLEKHA8Q96JA3 519 aa15.67■□□□□ 0.1
SQSTM1-204ENST00000453046 KATNB1Q9BVA0 655 aa15.67■□□□□ 0.1
SQSTM1-204ENST00000453046 FN3KQ9H479 309 aa15.67■□□□□ 0.1
SQSTM1-204ENST00000453046 CMC2Q9NRP2 79 aa15.67■□□□□ 0.1
SQSTM1-204ENST00000453046 INIPQ9NRY2 104 aa15.67■□□□□ 0.1
SQSTM1-204ENST00000453046 TAS2R5Q9NYW4 299 aa15.67■□□□□ 0.1
SQSTM1-204ENST00000453046 BLOC1S6Q9UL45 172 aa15.67■□□□□ 0.1
SQSTM1-204ENST00000453046 PCDHGB5Q9Y5G0 923 aa15.67■□□□□ 0.1
SQSTM1-204ENST00000453046 ALPK2Q86TB3 2170 aa15.67■□□□□ 0.1
SQSTM1-204ENST00000453046 IGHV1-18A0A0C4DH31 117 aa15.66■□□□□ 0.1
SQSTM1-204ENST00000453046 RIIAD1A6NNX1 92 aa15.66■□□□□ 0.1
SQSTM1-204ENST00000453046 M0R129 80 aa15.66■□□□□ 0.1
SQSTM1-204ENST00000453046 PRKYO43930 277 aa15.66■□□□□ 0.1
SQSTM1-204ENST00000453046 TNFAIP8O95379 198 aa15.66■□□□□ 0.1
SQSTM1-204ENST00000453046 TXNDC12O95881 172 aa15.66■□□□□ 0.1
SQSTM1-204ENST00000453046 CRYAAP02489 173 aa15.66■□□□□ 0.1
SQSTM1-204ENST00000453046 ZNF3P17036 446 aa15.66■□□□□ 0.1
SQSTM1-204ENST00000453046 NOS3P29474 1203 aa15.66■□□□□ 0.1
SQSTM1-204ENST00000453046 CTXN1P60606 82 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms