RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 SLC35F2Q8IXU6 374 aa12.88□□□□□ -0.35
TNF-208ENST00000449264 TIGD4Q8IY51 512 aa12.88□□□□□ -0.35
TNF-208ENST00000449264 RND1Q92730 232 aa12.88□□□□□ -0.35
TNF-208ENST00000449264 TMEM80Q96HE8 168 aa12.88□□□□□ -0.35
TNF-208ENST00000449264 DMRTA2Q96SC8 542 aa12.88□□□□□ -0.35
TNF-208ENST00000449264 FOXB1Q99853 325 aa12.88□□□□□ -0.35
TNF-208ENST00000449264 POLE4Q9NR33 117 aa12.88□□□□□ -0.35
TNF-208ENST00000449264 EXOGQ9Y2C4 368 aaKnown RBP12.88□□□□□ -0.35
TNF-208ENST00000449264 NCOA6Q14686 2063 aaPredicted RBP12.88□□□□□ -0.35
TNF-208ENST00000449264 ZNF462Q96JM2 2506 aa12.88□□□□□ -0.35
TNF-208ENST00000449264 C12orf71A8MTZ7 269 aa12.87□□□□□ -0.35
TNF-208ENST00000449264 ZNF99A8MXY4 864 aaPredicted RBP12.87□□□□□ -0.35
TNF-208ENST00000449264 B8ZZF3 427 aa12.87□□□□□ -0.35
TNF-208ENST00000449264 EEF1E1-BLOC1S5C9J1V9 151 aa12.87□□□□□ -0.35
TNF-208ENST00000449264 EEF1E1O43324 174 aaKnown RBP12.87□□□□□ -0.35
TNF-208ENST00000449264 MT-ND2P03891 347 aa12.87□□□□□ -0.35
TNF-208ENST00000449264 PSKH1P11801 424 aa12.87□□□□□ -0.35
TNF-208ENST00000449264 ATP6V1B1P15313 513 aa12.87□□□□□ -0.35
TNF-208ENST00000449264 MSR1P21757 451 aa12.87□□□□□ -0.35
TNF-208ENST00000449264 GNLYP22749 145 aa12.87□□□□□ -0.35
TNF-208ENST00000449264 OPRM1P35372 400 aa12.87□□□□□ -0.35
TNF-208ENST00000449264 ENTPD1P49961 510 aa12.87□□□□□ -0.35
TNF-208ENST00000449264 SLC16A9Q7RTY1 509 aa12.87□□□□□ -0.35
TNF-208ENST00000449264 DPY19L4Q7Z388 723 aa12.87□□□□□ -0.35
TNF-208ENST00000449264 LUZP2Q86TE4 346 aa12.87□□□□□ -0.35
TNF-208ENST00000449264 ATCAYQ86WG3 371 aa12.87□□□□□ -0.35
TNF-208ENST00000449264 LINC00346Q8IVM7 164 aa12.87□□□□□ -0.35
TNF-208ENST00000449264 ZNF843Q8N446 348 aa12.87□□□□□ -0.35
TNF-208ENST00000449264 LRRC18Q8N456 261 aa12.87□□□□□ -0.35
TNF-208ENST00000449264 RFLNBQ8N5W9 214 aa12.87□□□□□ -0.35
TNF-208ENST00000449264 TSPAN14Q8NG11 270 aa12.87□□□□□ -0.35
TNF-208ENST00000449264 PRR7Q8TB68 274 aa12.87□□□□□ -0.35
TNF-208ENST00000449264 NELFAQ9H3P2 528 aa12.87□□□□□ -0.35
TNF-208ENST00000449264 MRPS18AQ9NVS2 196 aaKnown RBP12.87□□□□□ -0.35
TNF-208ENST00000449264 TMEM38BQ9NVV0 291 aa12.87□□□□□ -0.35
TNF-208ENST00000449264 RPL36A-HNRNPH2H7BZ11 118 aa12.86□□□□□ -0.35
TNF-208ENST00000449264 ZNF593O00488 134 aaPredicted RBP12.86□□□□□ -0.35
TNF-208ENST00000449264 CGAP01215 116 aa12.86□□□□□ -0.35
TNF-208ENST00000449264 ITGA5P08648 1049 aa12.86□□□□□ -0.35
TNF-208ENST00000449264 MYL12AP19105 171 aa12.86□□□□□ -0.35
TNF-208ENST00000449264 DCKP27707 260 aa12.86□□□□□ -0.35
TNF-208ENST00000449264 ARF1P84077 181 aaKnown RBP12.86□□□□□ -0.35
TNF-208ENST00000449264 ZNF773Q6PK81 442 aa12.86□□□□□ -0.35
TNF-208ENST00000449264 KLHL24Q6TFL4 600 aa12.86□□□□□ -0.35
TNF-208ENST00000449264 ZNF813Q6ZN06 617 aa12.86□□□□□ -0.35
TNF-208ENST00000449264 Q6ZT83 130 aa12.86□□□□□ -0.35
TNF-208ENST00000449264 ZNF610Q8N9Z0 462 aa12.86□□□□□ -0.35
TNF-208ENST00000449264 GALNT11Q8NCW6 608 aa12.86□□□□□ -0.35
TNF-208ENST00000449264 NABP1Q96AH0 204 aa12.86□□□□□ -0.35
TNF-208ENST00000449264 MARCH7Q9H992 704 aa12.86□□□□□ -0.35
TNF-208ENST00000449264 FGF20Q9NP95 211 aaPredicted RBP12.86□□□□□ -0.35
TNF-208ENST00000449264 PLSCR4Q9NRQ2 329 aa12.86□□□□□ -0.35
TNF-208ENST00000449264 KCNG2Q9UJ96 466 aa12.86□□□□□ -0.35
TNF-208ENST00000449264 DIMT1Q9UNQ2 313 aaKnown RBP12.86□□□□□ -0.35
TNF-208ENST00000449264 SNX5Q9Y5X3 404 aa12.86□□□□□ -0.35
TNF-208ENST00000449264 A0A096LPE4 126 aa12.86□□□□□ -0.35
TNF-208ENST00000449264 A0A1W2PPZ6 126 aa12.86□□□□□ -0.35
TNF-208ENST00000449264 J3QRE1 110 aa12.86□□□□□ -0.35
TNF-208ENST00000449264 LYZL6O75951 148 aa12.86□□□□□ -0.35
TNF-208ENST00000449264 C1QL1O75973 258 aa12.86□□□□□ -0.35
TNF-208ENST00000449264 HRGP04196 525 aa12.86□□□□□ -0.35
TNF-208ENST00000449264 CD8BP10966 210 aa12.86□□□□□ -0.35
TNF-208ENST00000449264 MPGP29372 298 aa12.86□□□□□ -0.35
TNF-208ENST00000449264 ACTC1P68032 377 aa12.86□□□□□ -0.35
TNF-208ENST00000449264 ACTA1P68133 377 aa12.86□□□□□ -0.35
TNF-208ENST00000449264 MRPS34P82930 218 aaKnown RBP12.86□□□□□ -0.35
TNF-208ENST00000449264 SOWAHCQ53LP3 525 aaPredicted RBP12.86□□□□□ -0.35
TNF-208ENST00000449264 CORO6Q6QEF8 472 aa12.86□□□□□ -0.35
TNF-208ENST00000449264 FOXL2NBQ6ZUU3 175 aa12.86□□□□□ -0.35
TNF-208ENST00000449264 PRSS48Q7RTY5 328 aa12.86□□□□□ -0.35
TNF-208ENST00000449264 ACBD7Q8N6N7 88 aa12.86□□□□□ -0.35
TNF-208ENST00000449264 SH3GL3Q99963 347 aa12.86□□□□□ -0.35
TNF-208ENST00000449264 ZNF416Q9BWM5 594 aa12.86□□□□□ -0.35
TNF-208ENST00000449264 CDADC1Q9BWV3 514 aa12.86□□□□□ -0.35
TNF-208ENST00000449264 LAMP5Q9UJQ1 280 aa12.86□□□□□ -0.35
TNF-208ENST00000449264 COPS3Q9UNS2 423 aa12.86□□□□□ -0.35
TNF-208ENST00000449264 KLHDC2Q9Y2U9 406 aa12.86□□□□□ -0.35
TNF-208ENST00000449264 PCDHGB1Q9Y5G3 927 aa12.86□□□□□ -0.35
TNF-208ENST00000449264 DAPL1A0PJW8 107 aa12.85□□□□□ -0.35
TNF-208ENST00000449264 TRIM64A6NGJ6 449 aa12.85□□□□□ -0.35
TNF-208ENST00000449264 DVL2O14641 736 aa12.85□□□□□ -0.35
TNF-208ENST00000449264 IL18BPO95998 194 aa12.85□□□□□ -0.35
TNF-208ENST00000449264 IGHA1P01876 353 aa12.85□□□□□ -0.35
TNF-208ENST00000449264 SMIM18P0DKX4 95 aa12.85□□□□□ -0.35
TNF-208ENST00000449264 NPR2P20594 1047 aa12.85□□□□□ -0.35
TNF-208ENST00000449264 IGHV1-2P23083 117 aa12.85□□□□□ -0.35
TNF-208ENST00000449264 ETV1P50549 477 aa12.85□□□□□ -0.35
TNF-208ENST00000449264 LHFPL3Q86UP9 236 aa12.85□□□□□ -0.35
TNF-208ENST00000449264 CDC20BQ86Y33 519 aa12.85□□□□□ -0.35
TNF-208ENST00000449264 SLC22A24Q8N4F4 322 aa12.85□□□□□ -0.35
TNF-208ENST00000449264 YIPF3Q9GZM5 350 aa12.85□□□□□ -0.35
TNF-208ENST00000449264 SIAEQ9HAT2 523 aa12.85□□□□□ -0.35
TNF-208ENST00000449264 ASH2LQ9UBL3 628 aa12.85□□□□□ -0.35
TNF-208ENST00000449264 ZNF629Q9UEG4 869 aaPredicted RBP12.85□□□□□ -0.35
TNF-208ENST00000449264 CLEC2DQ9UHP7 191 aa12.85□□□□□ -0.35
TNF-208ENST00000449264 RALYQ9UKM9 306 aaKnown RBP12.85□□□□□ -0.35
TNF-208ENST00000449264 EXOSC1Q9Y3B2 195 aaKnown RBP12.85□□□□□ -0.35
TNF-208ENST00000449264 A0A087WXM4 84 aa12.84□□□□□ -0.35
TNF-208ENST00000449264 A0A1W2PQL4 384 aaPredicted RBP12.84□□□□□ -0.35
TNF-208ENST00000449264 ZNF670-ZNF695F2Z2N8 137 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms