RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 TMEM38BQ9NVV0 291 aa17.19■□□□□ 0.34
SGCE-207ENST00000447873 Q9UFV3 132 aa17.19■□□□□ 0.34
SGCE-207ENST00000447873 A0A087WXM4 84 aa17.19■□□□□ 0.34
SGCE-207ENST00000447873 ZNF99A8MXY4 864 aaPredicted RBP17.19■□□□□ 0.34
SGCE-207ENST00000447873 CCL21O00585 134 aa17.19■□□□□ 0.34
SGCE-207ENST00000447873 CGAP01215 116 aa17.19■□□□□ 0.34
SGCE-207ENST00000447873 MT-ND2P03891 347 aa17.19■□□□□ 0.34
SGCE-207ENST00000447873 SPARCP09486 303 aa17.19■□□□□ 0.34
SGCE-207ENST00000447873 OR2T7P0C7T2 308 aa17.19■□□□□ 0.34
SGCE-207ENST00000447873 CD8BP10966 210 aa17.19■□□□□ 0.34
SGCE-207ENST00000447873 MYL12AP19105 171 aa17.19■□□□□ 0.34
SGCE-207ENST00000447873 ACTC1P68032 377 aa17.19■□□□□ 0.34
SGCE-207ENST00000447873 ACTA1P68133 377 aa17.19■□□□□ 0.34
SGCE-207ENST00000447873 MRPS34P82930 218 aaKnown RBP17.19■□□□□ 0.34
SGCE-207ENST00000447873 FOXL2NBQ6ZUU3 175 aa17.19■□□□□ 0.34
SGCE-207ENST00000447873 ATCAYQ86WG3 371 aa17.19■□□□□ 0.34
SGCE-207ENST00000447873 ACBD7Q8N6N7 88 aa17.19■□□□□ 0.34
SGCE-207ENST00000447873 OR2T27Q8NH04 317 aa17.19■□□□□ 0.34
SGCE-207ENST00000447873 RND1Q92730 232 aa17.19■□□□□ 0.34
SGCE-207ENST00000447873 HTRA1Q92743 480 aa17.19■□□□□ 0.34
SGCE-207ENST00000447873 TBX5Q99593 518 aa17.19■□□□□ 0.34
SGCE-207ENST00000447873 CDADC1Q9BWV3 514 aa17.19■□□□□ 0.34
SGCE-207ENST00000447873 YIPF3Q9GZM5 350 aa17.19■□□□□ 0.34
SGCE-207ENST00000447873 EMC7Q9NPA0 242 aa17.19■□□□□ 0.34
SGCE-207ENST00000447873 CHCHD3Q9NX63 227 aaKnown RBP17.19■□□□□ 0.34
SGCE-207ENST00000447873 C12orf71A8MTZ7 269 aa17.18■□□□□ 0.34
SGCE-207ENST00000447873 B8ZZF3 427 aa17.18■□□□□ 0.34
SGCE-207ENST00000447873 SEC14L2O76054 403 aa17.18■□□□□ 0.34
SGCE-207ENST00000447873 IL18BPO95998 194 aa17.18■□□□□ 0.34
SGCE-207ENST00000447873 IGHA1P01876 353 aa17.18■□□□□ 0.34
SGCE-207ENST00000447873 PRB1P04280 392 aa17.18■□□□□ 0.34
SGCE-207ENST00000447873 SCG5P05408 212 aa17.18■□□□□ 0.34
SGCE-207ENST00000447873 ADRA2AP08913 450 aa17.18■□□□□ 0.34
SGCE-207ENST00000447873 B4GALT1P15291 398 aa17.18■□□□□ 0.34
SGCE-207ENST00000447873 ATP6V1B1P15313 513 aa17.18■□□□□ 0.34
SGCE-207ENST00000447873 MSR1P21757 451 aa17.18■□□□□ 0.34
SGCE-207ENST00000447873 BMP5P22003 454 aa17.18■□□□□ 0.34
SGCE-207ENST00000447873 MPGP29372 298 aa17.18■□□□□ 0.34
SGCE-207ENST00000447873 RPS27P42677 84 aaKnown RBP17.18■□□□□ 0.34
SGCE-207ENST00000447873 HCCSP53701 268 aa17.18■□□□□ 0.34
SGCE-207ENST00000447873 KCNMB1Q16558 191 aa17.18■□□□□ 0.34
SGCE-207ENST00000447873 Q6ZT83 130 aa17.18■□□□□ 0.34
SGCE-207ENST00000447873 DPY19L4Q7Z388 723 aa17.18■□□□□ 0.34
SGCE-207ENST00000447873 ZNF610Q8N9Z0 462 aa17.18■□□□□ 0.34
SGCE-207ENST00000447873 GALNT11Q8NCW6 608 aa17.18■□□□□ 0.34
SGCE-207ENST00000447873 SIGLEC11Q96RL6 698 aa17.18■□□□□ 0.34
SGCE-207ENST00000447873 OPN3Q9H1Y3 402 aaPredicted RBP17.18■□□□□ 0.34
SGCE-207ENST00000447873 SIAEQ9HAT2 523 aa17.18■□□□□ 0.34
SGCE-207ENST00000447873 ZNF629Q9UEG4 869 aaPredicted RBP17.18■□□□□ 0.34
SGCE-207ENST00000447873 POLR1DQ9Y2S0 133 aa17.18■□□□□ 0.34
SGCE-207ENST00000447873 EXOSC1Q9Y3B2 195 aaKnown RBP17.18■□□□□ 0.34
SGCE-207ENST00000447873 MYO7BQ6PIF6 2116 aa17.17■□□□□ 0.34
SGCE-207ENST00000447873 DAPL1A0PJW8 107 aa17.17■□□□□ 0.34
SGCE-207ENST00000447873 TMCC2O75069 709 aa17.17■□□□□ 0.34
SGCE-207ENST00000447873 FOXG1P55316 489 aaPredicted RBP17.17■□□□□ 0.34
SGCE-207ENST00000447873 ARF1P84077 181 aaKnown RBP17.17■□□□□ 0.34
SGCE-207ENST00000447873 ZNF813Q6ZN06 617 aa17.17■□□□□ 0.34
SGCE-207ENST00000447873 LHFPL3Q86UP9 236 aa17.17■□□□□ 0.34
SGCE-207ENST00000447873 SPARTQ8N0X7 666 aa17.17■□□□□ 0.34
SGCE-207ENST00000447873 NABP1Q96AH0 204 aa17.17■□□□□ 0.34
SGCE-207ENST00000447873 CDCA4Q9BXL8 241 aa17.17■□□□□ 0.34
SGCE-207ENST00000447873 INPP5EQ9NRR6 644 aa17.17■□□□□ 0.34
SGCE-207ENST00000447873 LAMP5Q9UJQ1 280 aa17.17■□□□□ 0.34
SGCE-207ENST00000447873 ESPL1Q14674 2120 aa17.17■□□□□ 0.34
SGCE-207ENST00000447873 A0A1W2PQL4 384 aaPredicted RBP17.16■□□□□ 0.34
SGCE-207ENST00000447873 ZNF670-ZNF695F2Z2N8 137 aa17.16■□□□□ 0.34
SGCE-207ENST00000447873 SH3BGRP55822 239 aaPredicted RBP17.16■□□□□ 0.34
SGCE-207ENST00000447873 LSM6P62312 80 aaKnown RBP17.16■□□□□ 0.34
SGCE-207ENST00000447873 IGFBP7Q16270 282 aa17.16■□□□□ 0.34
SGCE-207ENST00000447873 TEX30Q5JUR7 227 aa17.16■□□□□ 0.34
SGCE-207ENST00000447873 FAM27BQ5VT28 67 aa17.16■□□□□ 0.34
SGCE-207ENST00000447873 BEND4Q6ZU67 534 aa17.16■□□□□ 0.34
SGCE-207ENST00000447873 CDC20BQ86Y33 519 aa17.16■□□□□ 0.34
SGCE-207ENST00000447873 LRRC18Q8N456 261 aa17.16■□□□□ 0.34
SGCE-207ENST00000447873 SLC22A24Q8N4F4 322 aa17.16■□□□□ 0.34
SGCE-207ENST00000447873 OTOSQ8NHW6 89 aa17.16■□□□□ 0.34
SGCE-207ENST00000447873 MNTQ99583 582 aa17.16■□□□□ 0.34
SGCE-207ENST00000447873 JAM3Q9BX67 310 aa17.16■□□□□ 0.34
SGCE-207ENST00000447873 TAS2R16Q9NYV7 291 aa17.16■□□□□ 0.34
SGCE-207ENST00000447873 KCNG2Q9UJ96 466 aa17.16■□□□□ 0.34
SGCE-207ENST00000447873 ERGIC3Q9Y282 383 aa17.16■□□□□ 0.34
SGCE-207ENST00000447873 TMEM14AQ9Y6G1 99 aa17.16■□□□□ 0.34
SGCE-207ENST00000447873 DVL2O14641 736 aa17.15■□□□□ 0.34
SGCE-207ENST00000447873 FARS2O95363 451 aaKnown RBP17.15■□□□□ 0.34
SGCE-207ENST00000447873 ITGA5P08648 1049 aa17.15■□□□□ 0.34
SGCE-207ENST00000447873 OR8G3PP0DMU2 310 aa17.15■□□□□ 0.34
SGCE-207ENST00000447873 ETV1P50549 477 aa17.15■□□□□ 0.34
SGCE-207ENST00000447873 TGFBR3Q03167 851 aa17.15■□□□□ 0.34
SGCE-207ENST00000447873 PCK2Q16822 640 aa17.15■□□□□ 0.34
SGCE-207ENST00000447873 NRN1LQ496H8 165 aa17.15■□□□□ 0.34
SGCE-207ENST00000447873 RNLSQ5VYX0 342 aa17.15■□□□□ 0.34
SGCE-207ENST00000447873 ZNF843Q8N446 348 aa17.15■□□□□ 0.34
SGCE-207ENST00000447873 SVOPQ8N4V2 548 aa17.15■□□□□ 0.34
SGCE-207ENST00000447873 ZNF454Q8N9F8 522 aa17.15■□□□□ 0.34
SGCE-207ENST00000447873 PRR7Q8TB68 274 aa17.15■□□□□ 0.34
SGCE-207ENST00000447873 ZNF416Q9BWM5 594 aa17.15■□□□□ 0.34
SGCE-207ENST00000447873 PIGMQ9H3S5 423 aa17.15■□□□□ 0.34
SGCE-207ENST00000447873 ERVK13-1Q9NX77 482 aa17.15■□□□□ 0.34
SGCE-207ENST00000447873 CLEC2DQ9UHP7 191 aa17.15■□□□□ 0.34
SGCE-207ENST00000447873 CYB5R1Q9UHQ9 305 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms