RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 SGPP1Q9BX95 441 aa17.41■□□□□ 0.38
HMGA1-205ENST00000447654 DOK5Q9P104 306 aa17.41■□□□□ 0.38
HMGA1-205ENST00000447654 STEAP1Q9UHE8 339 aa17.41■□□□□ 0.38
HMGA1-205ENST00000447654 LRRK1Q38SD2 2015 aa17.41■□□□□ 0.38
HMGA1-205ENST00000447654 TAAR5O14804 337 aa17.4■□□□□ 0.38
HMGA1-205ENST00000447654 SRPX2O60687 465 aaPredicted RBP17.4■□□□□ 0.38
HMGA1-205ENST00000447654 LYL1P12980 280 aa17.4■□□□□ 0.38
HMGA1-205ENST00000447654 CSRP1P21291 193 aaKnown RBP17.4■□□□□ 0.38
HMGA1-205ENST00000447654 TNFRSF9Q07011 255 aa17.4■□□□□ 0.38
HMGA1-205ENST00000447654 OR8G1Q15617 311 aa17.4■□□□□ 0.38
HMGA1-205ENST00000447654 C21orf62-AS1Q17RA5 79 aa17.4■□□□□ 0.38
HMGA1-205ENST00000447654 FRRS1Q6ZNA5 592 aa17.4■□□□□ 0.38
HMGA1-205ENST00000447654 ACBD4Q8NC06 268 aa17.4■□□□□ 0.38
HMGA1-205ENST00000447654 OR9A4Q8NGU2 314 aa17.4■□□□□ 0.38
HMGA1-205ENST00000447654 DCUN1D4Q92564 292 aa17.4■□□□□ 0.38
HMGA1-205ENST00000447654 PDCD1LG2Q9BQ51 273 aa17.4■□□□□ 0.38
HMGA1-205ENST00000447654 OR52A5Q9H2C5 316 aa17.4■□□□□ 0.38
HMGA1-205ENST00000447654 ICAM5Q9UMF0 924 aa17.4■□□□□ 0.38
HMGA1-205ENST00000447654 TBC1D3BA6NDS4 549 aa17.4■□□□□ 0.38
HMGA1-205ENST00000447654 C9JQL5 133 aa17.4■□□□□ 0.38
HMGA1-205ENST00000447654 K7ESM1 405 aa17.4■□□□□ 0.38
HMGA1-205ENST00000447654 CTAG2O75638 210 aa17.4■□□□□ 0.38
HMGA1-205ENST00000447654 TBC1D3HP0C7X1 549 aa17.4■□□□□ 0.38
HMGA1-205ENST00000447654 ADH5P11766 374 aa17.4■□□□□ 0.38
HMGA1-205ENST00000447654 EN2P19622 333 aaPredicted RBP17.4■□□□□ 0.38
HMGA1-205ENST00000447654 HTR2CP28335 458 aa17.4■□□□□ 0.38
HMGA1-205ENST00000447654 AKR1C3P42330 323 aa17.4■□□□□ 0.38
HMGA1-205ENST00000447654 TBC1D3GQ6DHY5 549 aa17.4■□□□□ 0.38
HMGA1-205ENST00000447654 SLC35F3Q8IY50 421 aa17.4■□□□□ 0.38
HMGA1-205ENST00000447654 ACOT4Q8N9L9 421 aa17.4■□□□□ 0.38
HMGA1-205ENST00000447654 RBM18Q96H35 190 aaKnown RBP17.4■□□□□ 0.38
HMGA1-205ENST00000447654 CNN2Q99439 309 aaKnown RBP17.4■□□□□ 0.38
HMGA1-205ENST00000447654 PTGES2Q9H7Z7 377 aa17.4■□□□□ 0.38
HMGA1-205ENST00000447654 ZCCHC3Q9NUD5 404 aaKnown RBP17.4■□□□□ 0.38
HMGA1-205ENST00000447654 ZNF223Q9UK11 482 aaPredicted RBP17.4■□□□□ 0.38
HMGA1-205ENST00000447654 STARD10Q9Y365 291 aa17.4■□□□□ 0.38
HMGA1-205ENST00000447654 CSAG2Q9Y5P2 127 aa17.4■□□□□ 0.38
HMGA1-205ENST00000447654 A0A0B4J2A0 478 aa17.39■□□□□ 0.37
HMGA1-205ENST00000447654 ZNF587BE7ETH6 402 aa17.39■□□□□ 0.37
HMGA1-205ENST00000447654 THY1P04216 161 aa17.39■□□□□ 0.37
HMGA1-205ENST00000447654 HEXBP07686 556 aa17.39■□□□□ 0.37
HMGA1-205ENST00000447654 HNRNPA1P09651 372 aaKnown RBP eCLIP17.39■□□□□ 0.37
HMGA1-205ENST00000447654 TBPL1P62380 186 aa17.39■□□□□ 0.37
HMGA1-205ENST00000447654 USF2Q15853 346 aaPredicted RBP17.39■□□□□ 0.37
HMGA1-205ENST00000447654 GAB4Q2WGN9 574 aa17.39■□□□□ 0.37
HMGA1-205ENST00000447654 LRRTM4Q86VH4 590 aa17.39■□□□□ 0.37
HMGA1-205ENST00000447654 OR2L13Q8N349 312 aa17.39■□□□□ 0.37
HMGA1-205ENST00000447654 TRAM1L1Q8N609 369 aa17.39■□□□□ 0.37
HMGA1-205ENST00000447654 CCDC54Q8NEL0 328 aa17.39■□□□□ 0.37
HMGA1-205ENST00000447654 VN1R2Q8NFZ6 395 aa17.39■□□□□ 0.37
HMGA1-205ENST00000447654 OR13D1Q8NGV5 346 aa17.39■□□□□ 0.37
HMGA1-205ENST00000447654 OR4C6Q8NH72 309 aa17.39■□□□□ 0.37
HMGA1-205ENST00000447654 WNT5BQ9H1J7 359 aa17.39■□□□□ 0.37
HMGA1-205ENST00000447654 SLC2A8Q9NY64 477 aa17.39■□□□□ 0.37
HMGA1-205ENST00000447654 SHPKQ9UHJ6 478 aa17.39■□□□□ 0.37
HMGA1-205ENST00000447654 A0A087WUJ7 227 aa17.39■□□□□ 0.37
HMGA1-205ENST00000447654 A8MWP6 167 aa17.39■□□□□ 0.37
HMGA1-205ENST00000447654 M0R036 132 aa17.39■□□□□ 0.37
HMGA1-205ENST00000447654 PPP1R2P9O14990 202 aa17.39■□□□□ 0.37
HMGA1-205ENST00000447654 TMIGD3P0DMS9 266 aaPredicted RBP17.39■□□□□ 0.37
HMGA1-205ENST00000447654 LPAR6P43657 344 aa17.39■□□□□ 0.37
HMGA1-205ENST00000447654 NDUFA6P56556 154 aa17.39■□□□□ 0.37
HMGA1-205ENST00000447654 HNRNPKP61978 463 aaKnown RBP eCLIP17.39■□□□□ 0.376e-30■□□□□ 9.8
HMGA1-205ENST00000447654 CRMP1Q14194 572 aa17.39■□□□□ 0.37
HMGA1-205ENST00000447654 MESTQ5EB52 335 aa17.39■□□□□ 0.37
HMGA1-205ENST00000447654 CARFQ8N187 725 aa17.39■□□□□ 0.37
HMGA1-205ENST00000447654 ZDHHC22Q8N966 263 aa17.39■□□□□ 0.37
HMGA1-205ENST00000447654 LMNTD1Q8N9Z9 388 aa17.39■□□□□ 0.37
HMGA1-205ENST00000447654 OR2L5Q8NG80 312 aa17.39■□□□□ 0.37
HMGA1-205ENST00000447654 IP6K3Q96PC2 410 aa17.39■□□□□ 0.37
HMGA1-205ENST00000447654 AQP10Q96PS8 301 aa17.39■□□□□ 0.37
HMGA1-205ENST00000447654 MYADMQ96S97 322 aa17.39■□□□□ 0.37
HMGA1-205ENST00000447654 SYNPO2LQ9H987 977 aa17.39■□□□□ 0.37
HMGA1-205ENST00000447654 CERS4Q9HA82 394 aa17.39■□□□□ 0.37
HMGA1-205ENST00000447654 CDV3Q9UKY7 258 aaKnown RBP17.39■□□□□ 0.37
HMGA1-205ENST00000447654 GPR55Q9Y2T6 319 aaPredicted RBP17.39■□□□□ 0.37
HMGA1-205ENST00000447654 NARSO43776 548 aaKnown RBP17.38■□□□□ 0.37
HMGA1-205ENST00000447654 MED6O75586 246 aa17.38■□□□□ 0.37
HMGA1-205ENST00000447654 NTN1O95631 604 aa17.38■□□□□ 0.37
HMGA1-205ENST00000447654 AMZ1Q400G9 498 aa17.38■□□□□ 0.37
HMGA1-205ENST00000447654 UNQ6494/PRO21346Q6UXR6 183 aa17.38■□□□□ 0.37
HMGA1-205ENST00000447654 SPNS3Q6ZMD2 512 aa17.38■□□□□ 0.37
HMGA1-205ENST00000447654 ZNF610Q8N9Z0 462 aa17.38■□□□□ 0.37
HMGA1-205ENST00000447654 M1APQ8TC57 530 aa17.38■□□□□ 0.37
HMGA1-205ENST00000447654 TMEM159Q96B96 161 aa17.38■□□□□ 0.37
HMGA1-205ENST00000447654 VSX1Q9NZR4 365 aaPredicted RBP17.38■□□□□ 0.37
HMGA1-205ENST00000447654 GNG8Q9UK08 70 aa17.38■□□□□ 0.37
HMGA1-205ENST00000447654 OR5H15A6NDH6 313 aa17.38■□□□□ 0.37
HMGA1-205ENST00000447654 OR5H1A6NKK0 313 aa17.38■□□□□ 0.37
HMGA1-205ENST00000447654 C5orf67F2Z3F1 127 aa17.38■□□□□ 0.37
HMGA1-205ENST00000447654 CCSO14618 274 aa17.38■□□□□ 0.37
HMGA1-205ENST00000447654 GMFGO60234 142 aa17.38■□□□□ 0.37
HMGA1-205ENST00000447654 PTBP3O95758 552 aaKnown RBP17.38■□□□□ 0.37
HMGA1-205ENST00000447654 SPARCP09486 303 aa17.38■□□□□ 0.37
HMGA1-205ENST00000447654 ELFN1P0C7U0 828 aa17.38■□□□□ 0.37
HMGA1-205ENST00000447654 AQP2P41181 271 aa17.38■□□□□ 0.37
HMGA1-205ENST00000447654 MAP3K8P41279 467 aa17.38■□□□□ 0.37
HMGA1-205ENST00000447654 UCP2P55851 309 aa17.38■□□□□ 0.37
HMGA1-205ENST00000447654 TGIF1Q15583 401 aa17.38■□□□□ 0.37
HMGA1-205ENST00000447654 Q499Y3 187 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms