RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 OR1J2Q8NGS2 313 aa12.69□□□□□ -0.38
USE1-202ENST00000445667 NDEL1Q9GZM8 345 aa12.69□□□□□ -0.38
USE1-202ENST00000445667 TPK1Q9H3S4 243 aa12.69□□□□□ -0.38
USE1-202ENST00000445667 C1orf198Q9H425 327 aa12.69□□□□□ -0.38
USE1-202ENST00000445667 KRCC1Q9NPI7 259 aaPredicted RBP12.69□□□□□ -0.38
USE1-202ENST00000445667 NRIP3Q9NQ35 241 aa12.69□□□□□ -0.38
USE1-202ENST00000445667 ACTR3BQ9P1U1 418 aa12.69□□□□□ -0.38
USE1-202ENST00000445667 DUSP13Q9UII6 198 aa12.69□□□□□ -0.38
USE1-202ENST00000445667 FBXO9Q9UK97 447 aaPredicted RBP12.69□□□□□ -0.38
USE1-202ENST00000445667 PRSS37A4D1T9 235 aa12.68□□□□□ -0.38
USE1-202ENST00000445667 SOCS2O14508 198 aa12.68□□□□□ -0.38
USE1-202ENST00000445667 SYNGR3O43761 229 aa12.68□□□□□ -0.38
USE1-202ENST00000445667 OR10H3O60404 316 aa12.68□□□□□ -0.38
USE1-202ENST00000445667 CLPTM1O96005 669 aa12.68□□□□□ -0.38
USE1-202ENST00000445667 TP53P04637 393 aaPredicted RBP12.68□□□□□ -0.38
USE1-202ENST00000445667 LCKP06239 509 aa12.68□□□□□ -0.38
USE1-202ENST00000445667 CST2P09228 141 aa12.68□□□□□ -0.38
USE1-202ENST00000445667 CALB2P22676 271 aa12.68□□□□□ -0.38
USE1-202ENST00000445667 STOMP27105 288 aa12.68□□□□□ -0.38
USE1-202ENST00000445667 SDHAP31040 664 aa12.68□□□□□ -0.38
USE1-202ENST00000445667 ALDH3B1P43353 468 aa12.68□□□□□ -0.38
USE1-202ENST00000445667 EVX1P49640 407 aa12.68□□□□□ -0.38
USE1-202ENST00000445667 UCP2P55851 309 aa12.68□□□□□ -0.38
USE1-202ENST00000445667 PPP2R2BQ00005 443 aa12.68□□□□□ -0.38
USE1-202ENST00000445667 MS4A2Q01362 244 aa12.68□□□□□ -0.38
USE1-202ENST00000445667 LOXL1Q08397 574 aaPredicted RBP12.68□□□□□ -0.38
USE1-202ENST00000445667 KRR1Q13601 381 aaKnown RBP12.68□□□□□ -0.38
USE1-202ENST00000445667 MAD2L1BPQ15013 274 aaPredicted RBP12.68□□□□□ -0.38
USE1-202ENST00000445667 OTPQ5XKR4 325 aa12.68□□□□□ -0.38
USE1-202ENST00000445667 RGS7BPQ6MZT1 257 aaPredicted RBP12.68□□□□□ -0.38
USE1-202ENST00000445667 UGT2A3Q6UWM9 527 aa12.68□□□□□ -0.38
USE1-202ENST00000445667 ICA1LQ8NDH6 482 aa12.68□□□□□ -0.38
USE1-202ENST00000445667 GPX7Q96SL4 187 aaPredicted RBP12.68□□□□□ -0.38
USE1-202ENST00000445667 ZNF416Q9BWM5 594 aa12.68□□□□□ -0.38
USE1-202ENST00000445667 OR2H1Q9GZK4 316 aa12.68□□□□□ -0.38
USE1-202ENST00000445667 WNT5BQ9H1J7 359 aa12.68□□□□□ -0.38
USE1-202ENST00000445667 LRMDAQ9H2I8 198 aa12.68□□□□□ -0.38
USE1-202ENST00000445667 RERGLQ9H628 205 aa12.68□□□□□ -0.38
USE1-202ENST00000445667 EMC7Q9NPA0 242 aa12.68□□□□□ -0.38
USE1-202ENST00000445667 REV1Q9UBZ9 1251 aa12.68□□□□□ -0.38
USE1-202ENST00000445667 TMCC3Q9ULS5 477 aa12.68□□□□□ -0.38
USE1-202ENST00000445667 LOC100509620A0A075B734 347 aa12.67□□□□□ -0.38
USE1-202ENST00000445667 TCRBV5S2A0A599 114 aa12.67□□□□□ -0.38
USE1-202ENST00000445667 LYNX1G3V0Z9 82 aa12.67□□□□□ -0.38
USE1-202ENST00000445667 SNAP29O95721 258 aa12.67□□□□□ -0.38
USE1-202ENST00000445667 LYNX1P0DP58 116 aa12.67□□□□□ -0.38
USE1-202ENST00000445667 DAOP14920 347 aa12.67□□□□□ -0.38
USE1-202ENST00000445667 CTLA4P16410 223 aa12.67□□□□□ -0.38
USE1-202ENST00000445667 MSR1P21757 451 aa12.67□□□□□ -0.38
USE1-202ENST00000445667 ENDOGQ14249 297 aaKnown RBP12.67□□□□□ -0.38
USE1-202ENST00000445667 ALKBH6Q3KRA9 238 aa12.67□□□□□ -0.38
USE1-202ENST00000445667 GPR139Q6DWJ6 353 aa12.67□□□□□ -0.38
USE1-202ENST00000445667 SMARCD3Q6STE5 483 aa12.67□□□□□ -0.38
USE1-202ENST00000445667 DPY19L2P2Q6ZN68 376 aa12.67□□□□□ -0.38
USE1-202ENST00000445667 PTCHD4Q6ZW05 846 aa12.67□□□□□ -0.38
USE1-202ENST00000445667 DHFR2Q86XF0 187 aa12.67□□□□□ -0.38
USE1-202ENST00000445667 NEU4Q8WWR8 484 aaPredicted RBP12.67□□□□□ -0.38
USE1-202ENST00000445667 CLPTM1LQ96KA5 538 aa12.67□□□□□ -0.38
USE1-202ENST00000445667 POM121L2Q96KW2 1035 aa12.67□□□□□ -0.38
USE1-202ENST00000445667 SYT4Q9H2B2 425 aa12.67□□□□□ -0.38
USE1-202ENST00000445667 POLE4Q9NR33 117 aa12.67□□□□□ -0.38
USE1-202ENST00000445667 TAS2R1Q9NYW7 299 aa12.67□□□□□ -0.38
USE1-202ENST00000445667 COA3Q9Y2R0 106 aaPredicted RBP12.67□□□□□ -0.38
USE1-202ENST00000445667 TIMM10BQ9Y5J6 103 aa12.67□□□□□ -0.38
USE1-202ENST00000445667 CSPG4Q6UVK1 2322 aa12.66□□□□□ -0.38
USE1-202ENST00000445667 A0A1W2PPW3 197 aa12.66□□□□□ -0.38
USE1-202ENST00000445667 LOC390937A0A1W2PQ73 354 aa12.66□□□□□ -0.38
USE1-202ENST00000445667 C5orf49A4QMS7 147 aa12.66□□□□□ -0.38
USE1-202ENST00000445667 VWC2LB2RUY7 222 aa12.66□□□□□ -0.38
USE1-202ENST00000445667 M0R233 179 aa12.66□□□□□ -0.38
USE1-202ENST00000445667 AHCYL1O43865 530 aa12.66□□□□□ -0.38
USE1-202ENST00000445667 CD5LO43866 347 aa12.66□□□□□ -0.38
USE1-202ENST00000445667 SLC16A7O60669 478 aa12.66□□□□□ -0.38
USE1-202ENST00000445667 MPZL1O95297 269 aa12.66□□□□□ -0.38
USE1-202ENST00000445667 PPP1R3DO95685 299 aa12.66□□□□□ -0.38
USE1-202ENST00000445667 ERCC1P07992 297 aaPredicted RBP12.66□□□□□ -0.38
USE1-202ENST00000445667 USF1P22415 310 aaPredicted RBP12.66□□□□□ -0.38
USE1-202ENST00000445667 CDKN2AP42771 156 aaKnown RBP12.66□□□□□ -0.38
USE1-202ENST00000445667 RAD52P43351 418 aa12.66□□□□□ -0.38
USE1-202ENST00000445667 NR4A2P43354 598 aa12.66□□□□□ -0.38
USE1-202ENST00000445667 GDI2P50395 445 aaKnown RBP12.66□□□□□ -0.38
USE1-202ENST00000445667 RPS6KA3P51812 740 aa12.66□□□□□ -0.38
USE1-202ENST00000445667 TRIM25Q14258 630 aaKnown RBP12.66□□□□□ -0.38
USE1-202ENST00000445667 GGTLC2Q14390 218 aa12.66□□□□□ -0.38
USE1-202ENST00000445667 TMEM249Q2WGJ8 235 aa12.66□□□□□ -0.38
USE1-202ENST00000445667 RFX4Q33E94 735 aa12.66□□□□□ -0.38
USE1-202ENST00000445667 ZNF774Q6NX45 483 aa12.66□□□□□ -0.38
USE1-202ENST00000445667 ARHGAP24Q8N264 748 aa12.66□□□□□ -0.38
USE1-202ENST00000445667 OR1J1Q8NGS3 322 aa12.66□□□□□ -0.38
USE1-202ENST00000445667 SYNPRQ8TBG9 265 aa12.66□□□□□ -0.38
USE1-202ENST00000445667 FANK1Q8TC84 345 aa12.66□□□□□ -0.38
USE1-202ENST00000445667 GNPDA2Q8TDQ7 276 aa12.66□□□□□ -0.38
USE1-202ENST00000445667 SAMD8Q96LT4 415 aa12.66□□□□□ -0.38
USE1-202ENST00000445667 ERMAPQ96PL5 475 aaPredicted RBP12.66□□□□□ -0.38
USE1-202ENST00000445667 PIMREGQ9BSJ6 248 aa12.66□□□□□ -0.38
USE1-202ENST00000445667 OR52D1Q9H346 318 aa12.66□□□□□ -0.38
USE1-202ENST00000445667 MS4A5Q9H3V2 200 aa12.66□□□□□ -0.38
USE1-202ENST00000445667 MYOZ1Q9NP98 299 aaPredicted RBP12.66□□□□□ -0.38
USE1-202ENST00000445667 YAE1D1Q9NRH1 226 aa12.66□□□□□ -0.38
USE1-202ENST00000445667 TAAR3PQ9P1P4 343 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms