RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.76□□□□□ -0.69
MSH6-204ENST00000445503 SARGQ9BW04 601 aa10.76□□□□□ -0.69
MSH6-204ENST00000445503 SELENOIQ9C0D9 397 aa10.76□□□□□ -0.69
MSH6-204ENST00000445503 MTFP1Q9UDX5 166 aa10.76□□□□□ -0.69
MSH6-204ENST00000445503 GPN3Q9UHW5 284 aaPredicted RBP10.76□□□□□ -0.69
MSH6-204ENST00000445503 KLF15Q9UIH9 416 aa10.76□□□□□ -0.69
MSH6-204ENST00000445503 AGPAT2O15120 278 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 CTDSPLO15194 276 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 FADS1O60427 444 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 CTAG2O75638 210 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 MPZL1O95297 269 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 OR4E1P0C645 316 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 GAAP10253 952 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 CD1CP29017 333 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 KIR2DL1P43626 348 aaPredicted RBP10.75□□□□□ -0.69
MSH6-204ENST00000445503 TOMM34Q15785 309 aaPredicted RBP10.75□□□□□ -0.69
MSH6-204ENST00000445503 TRAPPC6BQ86SZ2 158 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 GTPBP8Q8N3Z3 284 aaPredicted RBP10.75□□□□□ -0.69
MSH6-204ENST00000445503 OR1J2Q8NGS2 313 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 ST8SIA2Q92186 375 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 DCUN1D4Q92564 292 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 FGGYQ96C11 551 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 ZNF587Q96SQ5 575 aaPredicted RBP10.75□□□□□ -0.69
MSH6-204ENST00000445503 B9D1Q9UPM9 204 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 IGHV3-20A0A0C4DH32 117 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 SFTPBP07988 381 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 SLC2A1P11166 492 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 IGFBP4P22692 258 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 ELFN2Q5R3F8 820 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 ADGRG3Q86Y34 549 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 OR2AJ1Q8NGZ0 328 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 PMM1Q92871 262 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 CMBLQ96DG6 245 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 FAM71F1Q96KD3 344 aaPredicted RBP10.75□□□□□ -0.69
MSH6-204ENST00000445503 TSPAN32Q96QS1 320 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 AMELYQ99218 206 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 EMC6Q9BV81 110 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 HEXA-AS1Q9H8Q6 139 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 OBP2AQ9NY56 170 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 PRR32B1ATL7 298 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 SYT7O43581 403 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 LYPD3O95274 346 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 CT45A8P0DMV1 189 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 CT45A9P0DMV2 189 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 RPS4Y1P22090 263 aaKnown RBP10.75□□□□□ -0.69
MSH6-204ENST00000445503 MAP1BP46821 2468 aaKnown RBP10.75□□□□□ -0.69
MSH6-204ENST00000445503 SLC6A9P48067 706 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 POU3F1Q03052 451 aaPredicted RBP10.75□□□□□ -0.69
MSH6-204ENST00000445503 SCRN3Q0VDG4 424 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 CT45A2Q5DJT8 189 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 VWA2Q5GFL6 755 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 AWAT2Q6E213 333 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 FAM122CQ6P4D5 195 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 NUDCD2Q8WVJ2 157 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 RGP1Q92546 391 aaPredicted RBP10.75□□□□□ -0.69
MSH6-204ENST00000445503 KIF25Q9UIL4 384 aa10.75□□□□□ -0.69
MSH6-204ENST00000445503 LOC105371267A0A1B0GV96 52 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 OR5H14A6NHG9 310 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 D6RAR5 112 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 TOR1AO14656 332 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 EN2P19622 333 aaPredicted RBP10.74□□□□□ -0.69
MSH6-204ENST00000445503 FGL1Q08830 312 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 SLC9A3R2Q15599 337 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 DNM1P34Q6PK57 102 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 DCXRQ7Z4W1 244 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 CMIPQ8IY22 773 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 SLC43A2Q8N370 569 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 PHOSPHO2Q8TCD6 241 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 LRRC46Q96FV0 321 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 LCORQ96JN0 433 aaPredicted RBP10.74□□□□□ -0.69
MSH6-204ENST00000445503 KLRF1Q9NZS2 232 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 OPN4Q9UHM6 478 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 ATPIF1Q9UII2 106 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 DENND4CQ5VZ89 1909 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 OR4C45A6NMZ5 311 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 HTR3BO95264 441 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 FARS2O95363 451 aaKnown RBP10.74□□□□□ -0.69
MSH6-204ENST00000445503 LDOC1O95751 146 aaPredicted RBP10.74□□□□□ -0.69
MSH6-204ENST00000445503 IL5P05113 134 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 SMIM10L1P0DMW3 83 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 CAPZA1P52907 286 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 MGAT2Q10469 447 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 CHAF1BQ13112 559 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 CCINQ13939 588 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 SLC17A1Q14916 467 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 ZNF169Q14929 603 aaPredicted RBP10.74□□□□□ -0.69
MSH6-204ENST00000445503 C2orf68Q2NKX9 166 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 MESTQ5EB52 335 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 BPHLQ86WA6 291 aaPredicted RBP10.74□□□□□ -0.69
MSH6-204ENST00000445503 GRAMD2AQ8IUY3 354 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 THRSPQ92748 146 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 SMIM10Q96HG1 83 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 C4orf45Q96LM5 186 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 PCDHB16Q9NRJ7 776 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 ZNF230Q9UIE0 474 aaPredicted RBP10.74□□□□□ -0.69
MSH6-204ENST00000445503 C5orf42Q9H799 3197 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 MED12Q93074 2177 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 TMED7-TICAM2A0A0A6YYA0 188 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 A0A0B4J2A0 478 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 TNFRSF10CO14798 259 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms