RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 RAB39BQ96DA2 213 aa13.12□□□□□ -0.31
SEC13-213ENST00000445064 ZNF583Q96ND8 569 aa13.12□□□□□ -0.31
SEC13-213ENST00000445064 PLA2G12AQ9BZM1 189 aa13.12□□□□□ -0.31
SEC13-213ENST00000445064 OR2J1Q9GZK6 312 aa13.12□□□□□ -0.31
SEC13-213ENST00000445064 POLR2J2Q9GZM3 115 aaKnown RBP13.12□□□□□ -0.31
SEC13-213ENST00000445064 POLR2J3Q9H1A7 115 aaKnown RBP13.12□□□□□ -0.31
SEC13-213ENST00000445064 TXNIPQ9H3M7 391 aa13.12□□□□□ -0.31
SEC13-213ENST00000445064 SMURF2Q9HAU4 748 aa13.12□□□□□ -0.31
SEC13-213ENST00000445064 STX18Q9P2W9 335 aaKnown RBP13.12□□□□□ -0.31
SEC13-213ENST00000445064 FXYD1O00168 92 aa13.11□□□□□ -0.31
SEC13-213ENST00000445064 ADRA2CP18825 462 aa13.11□□□□□ -0.31
SEC13-213ENST00000445064 FUT4P22083 530 aa13.11□□□□□ -0.31
SEC13-213ENST00000445064 LAP3P28838 519 aa13.11□□□□□ -0.31
SEC13-213ENST00000445064 GDI2P50395 445 aaKnown RBP13.11□□□□□ -0.31
SEC13-213ENST00000445064 ACTG1P63261 375 aa13.11□□□□□ -0.31
SEC13-213ENST00000445064 SF3A3Q12874 501 aaKnown RBP eCLIP13.11□□□□□ -0.31
SEC13-213ENST00000445064 ALG10Q5BKT4 473 aa13.11□□□□□ -0.31
SEC13-213ENST00000445064 FAM27BQ5VT28 67 aa13.11□□□□□ -0.31
SEC13-213ENST00000445064 IGFN1Q86VF2 1251 aa13.11□□□□□ -0.31
SEC13-213ENST00000445064 OR8J3Q8NGG0 315 aa13.11□□□□□ -0.31
SEC13-213ENST00000445064 KLF14Q8TD94 323 aaPredicted RBP13.11□□□□□ -0.31
SEC13-213ENST00000445064 ELMOD3Q96FG2 381 aa13.11□□□□□ -0.31
SEC13-213ENST00000445064 TIMD4Q96H15 378 aa13.11□□□□□ -0.31
SEC13-213ENST00000445064 TPD52L3Q96J77 140 aa13.11□□□□□ -0.31
SEC13-213ENST00000445064 RBP7Q96R05 134 aa13.11□□□□□ -0.31
SEC13-213ENST00000445064 TMEM120AQ9BXJ8 343 aa13.11□□□□□ -0.31
SEC13-213ENST00000445064 WNT5BQ9H1J7 359 aa13.11□□□□□ -0.31
SEC13-213ENST00000445064 HIF3AQ9Y2N7 669 aa13.11□□□□□ -0.31
SEC13-213ENST00000445064 A0A0G2JMP0 313 aa13.1□□□□□ -0.31
SEC13-213ENST00000445064 A0A0X1KG70 313 aa13.1□□□□□ -0.31
SEC13-213ENST00000445064 PLSCR5A0PG75 271 aa13.1□□□□□ -0.31
SEC13-213ENST00000445064 ZSCAN5BA6NJL1 495 aa13.1□□□□□ -0.31
SEC13-213ENST00000445064 NPIPB13A6NJU9 1138 aa13.1□□□□□ -0.31
SEC13-213ENST00000445064 NPIPB4C9JG80 1138 aa13.1□□□□□ -0.31
SEC13-213ENST00000445064 NGFP01138 241 aa13.1□□□□□ -0.31
SEC13-213ENST00000445064 IFNA14P01570 189 aa13.1□□□□□ -0.31
SEC13-213ENST00000445064 THRBP10828 461 aa13.1□□□□□ -0.31
SEC13-213ENST00000445064 IFI30P13284 250 aa13.1□□□□□ -0.31
SEC13-213ENST00000445064 KDELR2P33947 212 aa13.1□□□□□ -0.31
SEC13-213ENST00000445064 RBMXP38159 391 aaKnown RBP13.1□□□□□ -0.31
SEC13-213ENST00000445064 HILS1P60008 231 aa13.1□□□□□ -0.31
SEC13-213ENST00000445064 CTXN1P60606 82 aa13.1□□□□□ -0.31
SEC13-213ENST00000445064 RPL27P61353 136 aaKnown RBP13.1□□□□□ -0.31
SEC13-213ENST00000445064 PPP1CBP62140 327 aa13.1□□□□□ -0.31
SEC13-213ENST00000445064 HNRNPA0Q13151 305 aaKnown RBP13.1□□□□□ -0.31
SEC13-213ENST00000445064 LRRC23Q53EV4 343 aaPredicted RBP13.1□□□□□ -0.31
SEC13-213ENST00000445064 CYBRD1Q53TN4 286 aa13.1□□□□□ -0.31
SEC13-213ENST00000445064 SPRNQ5BIV9 151 aa13.1□□□□□ -0.31
SEC13-213ENST00000445064 FAM209AQ5JX71 171 aa13.1□□□□□ -0.31
SEC13-213ENST00000445064 DCAF12L2Q5VW00 463 aa13.1□□□□□ -0.31
SEC13-213ENST00000445064 MBNL2Q5VZF2 373 aaKnown RBP13.1□□□□□ -0.31
SEC13-213ENST00000445064 ERICH5Q6P6B1 374 aa13.1□□□□□ -0.31
SEC13-213ENST00000445064 ALDH16A1Q8IZ83 802 aa13.1□□□□□ -0.31
SEC13-213ENST00000445064 OR4M2Q8NGB6 313 aa13.1□□□□□ -0.31
SEC13-213ENST00000445064 ABHD4Q8TB40 342 aa13.1□□□□□ -0.31
SEC13-213ENST00000445064 GCDHQ92947 438 aaPredicted RBP13.1□□□□□ -0.31
SEC13-213ENST00000445064 BPIFA2Q96DR5 249 aa13.1□□□□□ -0.31
SEC13-213ENST00000445064 SIKE1Q9BRV8 207 aa13.1□□□□□ -0.31
SEC13-213ENST00000445064 OR2H1Q9GZK4 316 aa13.1□□□□□ -0.31
SEC13-213ENST00000445064 KLHL21Q9UJP4 597 aa13.1□□□□□ -0.31
SEC13-213ENST00000445064 TIMM10BQ9Y5J6 103 aa13.1□□□□□ -0.31
SEC13-213ENST00000445064 NBEAL1Q6ZS30 2694 aa13.1□□□□□ -0.31
SEC13-213ENST00000445064 LOC100653049A0A140TA62 436 aa13.09□□□□□ -0.31
SEC13-213ENST00000445064 ISPDA4D126 451 aa13.09□□□□□ -0.31
SEC13-213ENST00000445064 TRIM77I1YAP6 450 aa13.09□□□□□ -0.31
SEC13-213ENST00000445064 MRASO14807 208 aa13.09□□□□□ -0.31
SEC13-213ENST00000445064 KRT34O76011 436 aa13.09□□□□□ -0.31
SEC13-213ENST00000445064 UBOX5O94941 541 aa13.09□□□□□ -0.31
SEC13-213ENST00000445064 NPPAP01160 153 aa13.09□□□□□ -0.31
SEC13-213ENST00000445064 CST2P09228 141 aa13.09□□□□□ -0.31
SEC13-213ENST00000445064 YAP1P46937 504 aaKnown RBP13.09□□□□□ -0.31
SEC13-213ENST00000445064 ST3GAL3Q11203 375 aa13.09□□□□□ -0.31
SEC13-213ENST00000445064 KLF10Q13118 480 aa13.09□□□□□ -0.31
SEC13-213ENST00000445064 TAF11Q15544 211 aa13.09□□□□□ -0.31
SEC13-213ENST00000445064 ZNF774Q6NX45 483 aa13.09□□□□□ -0.31
SEC13-213ENST00000445064 UNQ6126/PRO20091Q6UXV3 157 aa13.09□□□□□ -0.31
SEC13-213ENST00000445064 RFPL4BQ6ZWI9 263 aa13.09□□□□□ -0.31
SEC13-213ENST00000445064 USP43Q70EL4 1123 aa13.09□□□□□ -0.31
SEC13-213ENST00000445064 C1QL2Q7Z5L3 287 aa13.09□□□□□ -0.31
SEC13-213ENST00000445064 MICU2Q8IYU8 434 aa13.09□□□□□ -0.31
SEC13-213ENST00000445064 TEX29Q8N6K0 151 aa13.09□□□□□ -0.31
SEC13-213ENST00000445064 OR51A7Q8NH64 312 aa13.09□□□□□ -0.31
SEC13-213ENST00000445064 FAM216AQ8WUB2 273 aa13.09□□□□□ -0.31
SEC13-213ENST00000445064 C4orf45Q96LM5 186 aa13.09□□□□□ -0.31
SEC13-213ENST00000445064 GAL3ST1Q99999 423 aa13.09□□□□□ -0.31
SEC13-213ENST00000445064 ALG12Q9BV10 488 aa13.09□□□□□ -0.31
SEC13-213ENST00000445064 C7orf69Q9H7B7 122 aa13.09□□□□□ -0.31
SEC13-213ENST00000445064 MSL2Q9HCI7 577 aa13.09□□□□□ -0.31
SEC13-213ENST00000445064 RHCGQ9UBD6 479 aa13.09□□□□□ -0.31
SEC13-213ENST00000445064 A4GNTQ9UNA3 340 aa13.09□□□□□ -0.31
SEC13-213ENST00000445064 ANK2Q01484 3957 aa13.08□□□□□ -0.32
SEC13-213ENST00000445064 A0A1W2PPL8 197 aa13.08□□□□□ -0.32
SEC13-213ENST00000445064 TMEM89A2RUT3 159 aa13.08□□□□□ -0.32
SEC13-213ENST00000445064 SCG5P05408 212 aa13.08□□□□□ -0.32
SEC13-213ENST00000445064 NR2C1P13056 603 aa13.08□□□□□ -0.32
SEC13-213ENST00000445064 GUCA1AP43080 201 aaPredicted RBP13.08□□□□□ -0.32
SEC13-213ENST00000445064 SELENOWP63302 87 aa13.08□□□□□ -0.32
SEC13-213ENST00000445064 LCN2P80188 198 aa13.08□□□□□ -0.32
SEC13-213ENST00000445064 HDXQ7Z353 690 aa13.08□□□□□ -0.32
SEC13-213ENST00000445064 C3orf56Q8N813 242 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms