RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 DGCR6Q14129 220 aa17.24■□□□□ 0.35
LRCH3-208ENST00000443727 ALKBH6Q3KRA9 238 aa17.24■□□□□ 0.35
LRCH3-208ENST00000443727 FAM27BQ5VT28 67 aa17.24■□□□□ 0.35
LRCH3-208ENST00000443727 TSEN54Q7Z6J9 526 aaKnown RBP17.24■□□□□ 0.35
LRCH3-208ENST00000443727 ALDH16A1Q8IZ83 802 aa17.24■□□□□ 0.35
LRCH3-208ENST00000443727 CPEB3Q8NE35 698 aaKnown RBP17.24■□□□□ 0.35
LRCH3-208ENST00000443727 AKR7LQ8NHP1 331 aa17.24■□□□□ 0.35
LRCH3-208ENST00000443727 SYNPRQ8TBG9 265 aa17.24■□□□□ 0.35
LRCH3-208ENST00000443727 BEX2Q9BXY8 128 aa17.24■□□□□ 0.35
LRCH3-208ENST00000443727 TAAR3PQ9P1P4 343 aa17.24■□□□□ 0.35
LRCH3-208ENST00000443727 EIF3KQ9UBQ5 218 aaKnown RBP17.24■□□□□ 0.35
LRCH3-208ENST00000443727 TAGLN3Q9UI15 199 aa17.24■□□□□ 0.35
LRCH3-208ENST00000443727 CDC42EP3Q9UKI2 254 aa17.24■□□□□ 0.35
LRCH3-208ENST00000443727 AURKCQ9UQB9 309 aa17.24■□□□□ 0.35
LRCH3-208ENST00000443727 ADAM18Q9Y3Q7 739 aa17.24■□□□□ 0.35
LRCH3-208ENST00000443727 C5orf49A4QMS7 147 aa17.23■□□□□ 0.35
LRCH3-208ENST00000443727 LYNX1G3V0Z9 82 aa17.23■□□□□ 0.35
LRCH3-208ENST00000443727 H7C1C5 153 aa17.23■□□□□ 0.35
LRCH3-208ENST00000443727 DCTN3O75935 186 aa17.23■□□□□ 0.35
LRCH3-208ENST00000443727 DIRAS1O95057 198 aa17.23■□□□□ 0.35
LRCH3-208ENST00000443727 CST2P09228 141 aa17.23■□□□□ 0.35
LRCH3-208ENST00000443727 LYNX1P0DP58 116 aa17.23■□□□□ 0.35
LRCH3-208ENST00000443727 NAT2P11245 290 aa17.23■□□□□ 0.35
LRCH3-208ENST00000443727 CHN2P52757 468 aa17.23■□□□□ 0.35
LRCH3-208ENST00000443727 LCN6P62502 163 aa17.23■□□□□ 0.35
LRCH3-208ENST00000443727 MXRA7P84157 204 aa17.23■□□□□ 0.35
LRCH3-208ENST00000443727 FHL1Q13642 323 aa17.23■□□□□ 0.35
LRCH3-208ENST00000443727 SAMD4BQ5PRF9 694 aaKnown RBP17.23■□□□□ 0.35
LRCH3-208ENST00000443727 FAM166AQ6J272 317 aa17.23■□□□□ 0.35
LRCH3-208ENST00000443727 FAM86B1Q8N7N1 296 aa17.23■□□□□ 0.35
LRCH3-208ENST00000443727 OR52J3Q8NH60 311 aa17.23■□□□□ 0.35
LRCH3-208ENST00000443727 SNX33Q8WV41 574 aa17.23■□□□□ 0.35
LRCH3-208ENST00000443727 ZNF570Q96NI8 536 aa17.23■□□□□ 0.35
LRCH3-208ENST00000443727 GORASP2Q9H8Y8 452 aa17.23■□□□□ 0.35
LRCH3-208ENST00000443727 SLCO1C1Q9NYB5 712 aa17.23■□□□□ 0.35
LRCH3-208ENST00000443727 MAGEL2Q9UJ55 1249 aa17.23■□□□□ 0.35
LRCH3-208ENST00000443727 KCNS2Q9ULS6 477 aa17.23■□□□□ 0.35
LRCH3-208ENST00000443727 TIMM10BQ9Y5J6 103 aa17.23■□□□□ 0.35
LRCH3-208ENST00000443727 LRP5LA4QPB2 252 aa17.22■□□□□ 0.35
LRCH3-208ENST00000443727 LMX1BO60663 402 aa17.22■□□□□ 0.35
LRCH3-208ENST00000443727 CLPTM1O96005 669 aa17.22■□□□□ 0.35
LRCH3-208ENST00000443727 MSR1P21757 451 aa17.22■□□□□ 0.35
LRCH3-208ENST00000443727 ERVS71-1P61550 626 aa17.22■□□□□ 0.35
LRCH3-208ENST00000443727 PSG4Q00888 419 aa17.22■□□□□ 0.35
LRCH3-208ENST00000443727 TMEM154Q6P9G4 183 aa17.22■□□□□ 0.35
LRCH3-208ENST00000443727 UNQ6126/PRO20091Q6UXV3 157 aa17.22■□□□□ 0.35
LRCH3-208ENST00000443727 PGAM4Q8N0Y7 254 aa17.22■□□□□ 0.35
LRCH3-208ENST00000443727 OR1J1Q8NGS3 322 aa17.22■□□□□ 0.35
LRCH3-208ENST00000443727 MCUR1Q96AQ8 359 aa17.22■□□□□ 0.35
LRCH3-208ENST00000443727 MSI2Q96DH6 328 aaKnown RBP17.22■□□□□ 0.35
LRCH3-208ENST00000443727 PYURFQ96I23 114 aa17.22■□□□□ 0.35
LRCH3-208ENST00000443727 C7orf34Q96L11 122 aa17.22■□□□□ 0.35
LRCH3-208ENST00000443727 Q96M85 177 aa17.22■□□□□ 0.35
LRCH3-208ENST00000443727 SNX18Q96RF0 628 aa17.22■□□□□ 0.35
LRCH3-208ENST00000443727 CDRT15Q96T59 188 aa17.22■□□□□ 0.35
LRCH3-208ENST00000443727 OR2H1Q9GZK4 316 aa17.22■□□□□ 0.35
LRCH3-208ENST00000443727 SHARPINQ9H0F6 387 aa17.22■□□□□ 0.35
LRCH3-208ENST00000443727 CHODLQ9H9P2 273 aa17.22■□□□□ 0.35
LRCH3-208ENST00000443727 NDE1Q9NXR1 346 aa17.22■□□□□ 0.35
LRCH3-208ENST00000443727 TRBV4-1A0A0J9YWV2 114 aa17.21■□□□□ 0.35
LRCH3-208ENST00000443727 C12orf71A8MTZ7 269 aa17.21■□□□□ 0.35
LRCH3-208ENST00000443727 NDUFB2O95178 105 aa17.21■□□□□ 0.35
LRCH3-208ENST00000443727 MT-ND5P03915 603 aa17.21■□□□□ 0.35
LRCH3-208ENST00000443727 HSD17B1P14061 328 aa17.21■□□□□ 0.35
LRCH3-208ENST00000443727 ZNF250P15622 560 aa17.21■□□□□ 0.35
LRCH3-208ENST00000443727 MSX2P35548 267 aaPredicted RBP17.21■□□□□ 0.35
LRCH3-208ENST00000443727 SMIM11AP58511 58 aa17.21■□□□□ 0.35
LRCH3-208ENST00000443727 MOGQ16653 247 aa17.21■□□□□ 0.35
LRCH3-208ENST00000443727 C16orf89Q6UX73 402 aa17.21■□□□□ 0.35
LRCH3-208ENST00000443727 RDH5Q92781 318 aa17.21■□□□□ 0.35
LRCH3-208ENST00000443727 RSRC1Q96IZ7 334 aaKnown RBP17.21■□□□□ 0.35
LRCH3-208ENST00000443727 NSMCE2Q96MF7 247 aa17.21■□□□□ 0.35
LRCH3-208ENST00000443727 HINT3Q9NQE9 182 aaKnown RBP17.21■□□□□ 0.35
LRCH3-208ENST00000443727 ARL8BQ9NVJ2 186 aa17.21■□□□□ 0.35
LRCH3-208ENST00000443727 TMEM160Q9NX00 188 aa17.21■□□□□ 0.35
LRCH3-208ENST00000443727 LPAR3Q9UBY5 353 aa17.21■□□□□ 0.35
LRCH3-208ENST00000443727 ANK3Q12955 4377 aaKnown RBP17.21■□□□□ 0.34
LRCH3-208ENST00000443727 TEX13CA0A0J9YWL9 993 aa17.2■□□□□ 0.34
LRCH3-208ENST00000443727 PRSS37A4D1T9 235 aa17.2■□□□□ 0.34
LRCH3-208ENST00000443727 UNC119BA6NIH7 251 aa17.2■□□□□ 0.34
LRCH3-208ENST00000443727 AHCYL1O43865 530 aa17.2■□□□□ 0.34
LRCH3-208ENST00000443727 TGFAP01135 160 aa17.2■□□□□ 0.34
LRCH3-208ENST00000443727 HPXP02790 462 aa17.2■□□□□ 0.34
LRCH3-208ENST00000443727 GCH1P30793 250 aa17.2■□□□□ 0.34
LRCH3-208ENST00000443727 SPIBQ01892 262 aa17.2■□□□□ 0.34
LRCH3-208ENST00000443727 GLO1Q04760 184 aa17.2■□□□□ 0.34
LRCH3-208ENST00000443727 RIN1Q13671 783 aa17.2■□□□□ 0.34
LRCH3-208ENST00000443727 GPR139Q6DWJ6 353 aa17.2■□□□□ 0.34
LRCH3-208ENST00000443727 PIGWQ7Z7B1 504 aa17.2■□□□□ 0.34
LRCH3-208ENST00000443727 POM121L2Q96KW2 1035 aa17.2■□□□□ 0.34
LRCH3-208ENST00000443727 ZNF416Q9BWM5 594 aa17.2■□□□□ 0.34
LRCH3-208ENST00000443727 WNT5BQ9H1J7 359 aa17.2■□□□□ 0.34
LRCH3-208ENST00000443727 RERGLQ9H628 205 aa17.2■□□□□ 0.34
LRCH3-208ENST00000443727 POLE4Q9NR33 117 aa17.2■□□□□ 0.34
LRCH3-208ENST00000443727 SIGLEC7Q9Y286 467 aa17.2■□□□□ 0.34
LRCH3-208ENST00000443727 IGLV3-9A0A075B6K5 115 aa17.19■□□□□ 0.34
LRCH3-208ENST00000443727 LOC100509620A0A075B734 347 aa17.19■□□□□ 0.34
LRCH3-208ENST00000443727 TACSTD2P09758 323 aa17.19■□□□□ 0.34
LRCH3-208ENST00000443727 ZNF26P17031 533 aaPredicted RBP17.19■□□□□ 0.34
LRCH3-208ENST00000443727 OMPP47874 163 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms