RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 TAS2R60P59551 318 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 DNLZQ5SXM8 178 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 MRPL2Q5T653 305 aaKnown RBP4.58□□□□□ -1.68
HERC1-201ENST00000443617 ACOT4Q8N9L9 421 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 ZNF587Q96SQ5 575 aaPredicted RBP4.58□□□□□ -1.68
HERC1-201ENST00000443617 TMEM184BQ9Y519 407 aaPredicted RBP4.58□□□□□ -1.68
HERC1-201ENST00000443617 DFFBO76075 338 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 ARG1P05089 322 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 CCR4P51679 360 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 SLC25A1P53007 311 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 HNF4GQ14541 408 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 AGERQ15109 404 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 CHRFAM7AQ494W8 412 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 DRAM2Q6UX65 266 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 LFNGQ8NES3 379 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 OR51D1Q8NGF3 324 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 Q96M85 177 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 CASD1Q96PB1 797 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 MACROD1Q9BQ69 325 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 MS4A8Q9BY19 250 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 WSB2Q9NYS7 404 aaPredicted RBP4.57□□□□□ -1.68
HERC1-201ENST00000443617 A0A1B0GTI1 187 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 PMP2P02689 132 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 MECP2P51608 486 aaKnown RBP4.57□□□□□ -1.68
HERC1-201ENST00000443617 LY6G6FQ5SQ64 297 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 LRRTM4Q86VH4 590 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 FNDC9Q8TBE3 224 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 RBM18Q96H35 190 aaKnown RBP4.57□□□□□ -1.68
HERC1-201ENST00000443617 LRFN5Q96NI6 719 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 Q9Y3F1 56 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 TSPAN11A1L157 253 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 HOXC4P09017 264 aaPredicted RBP4.57□□□□□ -1.68
HERC1-201ENST00000443617 ZGLP1P0C6A0 271 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 OR8U8P0C7N1 319 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 FAM157CP0CG43 387 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 ETFBKMTQ8IXQ9 262 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 SLC25A36Q96CQ1 311 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 NUDT21O43809 227 aaKnown RBP4.57□□□□□ -1.68
HERC1-201ENST00000443617 JTBO76095 146 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 CLLU1OSQ5K130 101 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 ULK3Q6PHR2 472 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 UBE3DQ7Z6J8 389 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 OR4S1Q8NGB4 309 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 WBP1LQ9NX94 342 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 SPACA6W5XKT8 324 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 GREM1O60565 184 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 CLUP10909 449 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 ZNF25P17030 456 aaPredicted RBP4.57□□□□□ -1.68
HERC1-201ENST00000443617 TBXA2RP21731 343 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 RPS11P62280 158 aaKnown RBP eCLIP4.57□□□□□ -1.68
HERC1-201ENST00000443617 OR8G1Q15617 311 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 C2orf76Q3KRA6 126 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 C4orf17Q53FE4 359 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 RPUSD3Q6P087 351 aaKnown RBP4.57□□□□□ -1.68
HERC1-201ENST00000443617 GPX8Q8TED1 209 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 JSRP1Q96MG2 331 aaPredicted RBP4.57□□□□□ -1.68
HERC1-201ENST00000443617 SRA1Q9HD15 236 aaKnown RBP4.57□□□□□ -1.68
HERC1-201ENST00000443617 C9orf170A2RU37 121 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 PRAMEF27A3QJZ7 478 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 FOXO1Q12778 655 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 ETV3LQ6ZN32 361 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 ARL14EPQ8N8R7 260 aaPredicted RBP4.57□□□□□ -1.68
HERC1-201ENST00000443617 MITD1Q8WV92 249 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 NOL4LQ96MY1 436 aaPredicted RBP4.57□□□□□ -1.68
HERC1-201ENST00000443617 CRLF2Q9HC73 371 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 DNAJB11Q9UBS4 358 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 DCDC2BA2VCK2 349 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 NPIPB9F8W1W9 429 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 HTR2CP28335 458 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 GRK6P43250 576 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 MLC1Q15049 377 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 GGNBP1Q5YKI7 109 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 WBP2Q969T9 261 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 DUSP22Q9NRW4 184 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 CA14Q9ULX7 337 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 F8VVB4 439 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 F8VWA3 439 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 DUS4LO95620 317 aaKnown RBP4.57□□□□□ -1.68
HERC1-201ENST00000443617 SCGB1D1O95968 90 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 ZNF619Q8N2I2 560 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 TAAR8Q969N4 342 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 CCDC3Q9BQI4 270 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 ULBP3Q9BZM4 244 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 METTL9Q9H1A3 318 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 PTGES2Q9H7Z7 377 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 TUBA4BQ9H853 241 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 LY75O60449 1722 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 A0A0A6YYD5 115 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 PEX12O00623 359 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 WNT11O96014 354 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 F3P13726 295 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 HIST1H1BP16401 226 aaKnown RBP4.57□□□□□ -1.68
HERC1-201ENST00000443617 TBPP20226 339 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 ALG10BQ5I7T1 473 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 OR2L13Q8N349 312 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 ZNF764Q96H86 408 aaPredicted RBP4.57□□□□□ -1.68
HERC1-201ENST00000443617 ZMAT3Q9HA38 289 aaKnown RBP4.57□□□□□ -1.68
HERC1-201ENST00000443617 CPMP14384 443 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 BCL6P41182 706 aa4.57□□□□□ -1.68
HERC1-201ENST00000443617 RIDAP52758 137 aaKnown RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms