RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 DVL3Q92997 716 aaPredicted RBP9.54□□□□□ -0.88
CALD1-210ENST00000443197 SPTSSAQ969W0 71 aa9.54□□□□□ -0.88
CALD1-210ENST00000443197 SLAMF6Q96DU3 332 aa9.54□□□□□ -0.88
CALD1-210ENST00000443197 TAS2R4Q9NYW5 299 aa9.54□□□□□ -0.88
CALD1-210ENST00000443197 SCP2D1Q9UJQ7 156 aa9.54□□□□□ -0.88
CALD1-210ENST00000443197 MCTS1Q9ULC4 181 aaKnown RBP9.54□□□□□ -0.88
CALD1-210ENST00000443197 TRIM64A6NGJ6 449 aa9.54□□□□□ -0.88
CALD1-210ENST00000443197 DCTN6O00399 190 aa9.54□□□□□ -0.88
CALD1-210ENST00000443197 PTP4A3O75365 173 aa9.54□□□□□ -0.88
CALD1-210ENST00000443197 ERCC1P07992 297 aaPredicted RBP9.54□□□□□ -0.88
CALD1-210ENST00000443197 SELENBP1Q13228 472 aa9.54□□□□□ -0.88
CALD1-210ENST00000443197 OR51E1Q8TCB6 317 aa9.54□□□□□ -0.88
CALD1-210ENST00000443197 TRIM63Q969Q1 353 aa9.54□□□□□ -0.88
CALD1-210ENST00000443197 ATF6BQ99941 703 aa9.54□□□□□ -0.88
CALD1-210ENST00000443197 DEFB127Q9H1M4 99 aa9.54□□□□□ -0.88
CALD1-210ENST00000443197 RBFOX1Q9NWB1 397 aaKnown RBP9.54□□□□□ -0.88
CALD1-210ENST00000443197 CAMK2AQ9UQM7 478 aa9.54□□□□□ -0.88
CALD1-210ENST00000443197 LOC107986453A0A1B0GWG9 222 aa9.54□□□□□ -0.88
CALD1-210ENST00000443197 IGHEP01854 428 aa9.54□□□□□ -0.88
CALD1-210ENST00000443197 IL11P20809 199 aa9.54□□□□□ -0.88
CALD1-210ENST00000443197 HTR5AP47898 357 aa9.54□□□□□ -0.88
CALD1-210ENST00000443197 FZD5Q13467 585 aa9.54□□□□□ -0.88
CALD1-210ENST00000443197 RNASE10Q5GAN6 216 aaKnown RBP9.54□□□□□ -0.88
CALD1-210ENST00000443197 ATAD3CQ5T2N8 411 aa9.54□□□□□ -0.88
CALD1-210ENST00000443197 FAAP20Q6NZ36 180 aa9.54□□□□□ -0.88
CALD1-210ENST00000443197 CCDC190Q86UF4 302 aa9.54□□□□□ -0.88
CALD1-210ENST00000443197 CNEP1R1Q8N9A8 125 aa9.54□□□□□ -0.88
CALD1-210ENST00000443197 ELP5Q8TE02 316 aa9.54□□□□□ -0.88
CALD1-210ENST00000443197 RNF170Q96K19 258 aa9.54□□□□□ -0.88
CALD1-210ENST00000443197 QPCTLQ9NXS2 382 aa9.54□□□□□ -0.88
CALD1-210ENST00000443197 PCDHGB2Q9Y5G2 931 aa9.54□□□□□ -0.88
CALD1-210ENST00000443197 FITM1A5D6W6 292 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 HTR3BO95264 441 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 HTR2CP28335 458 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 LAP3P28838 519 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 IFITM3Q01628 133 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 SLC17A1Q14916 467 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 SLC25A43Q8WUT9 341 aaPredicted RBP9.53□□□□□ -0.88
CALD1-210ENST00000443197 NARS2Q96I59 477 aaKnown RBP9.53□□□□□ -0.88
CALD1-210ENST00000443197 URM1Q9BTM9 101 aaKnown RBP9.53□□□□□ -0.88
CALD1-210ENST00000443197 C12orf49Q9H741 205 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 MOV10Q9HCE1 1003 aaKnown RBP9.53□□□□□ -0.88
CALD1-210ENST00000443197 MGAT4CQ9UBM8 478 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 EIF1BO60739 113 aaKnown RBP9.53□□□□□ -0.88
CALD1-210ENST00000443197 ATF1P18846 271 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 FGF9P31371 208 aaPredicted RBP9.53□□□□□ -0.88
CALD1-210ENST00000443197 HOXD12P35452 270 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 ZNF81P51508 661 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 AGAP7PQ5VUJ5 663 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 LINC00299Q6ZSB3 139 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 ZNF454Q8N9F8 522 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 STK35Q8TDR2 534 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 FAM3DQ96BQ1 224 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 SRRQ9GZT4 340 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 ICAM5Q9UMF0 924 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 NOSIPQ9Y314 301 aaKnown RBP9.53□□□□□ -0.88
CALD1-210ENST00000443197 HELZP42694 1942 aaKnown RBP9.53□□□□□ -0.88
CALD1-210ENST00000443197 MT-CO3P00414 261 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 TP53P04637 393 aaPredicted RBP9.53□□□□□ -0.88
CALD1-210ENST00000443197 SERPINA2P20848 420 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 CASP3P42574 277 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 VEGFCP49767 419 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 ARPC4P59998 168 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 STAC2Q6ZMT1 411 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 OR8H3Q8N146 312 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 DEFB124Q8NES8 71 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 OR51T1Q8NGJ9 327 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 OR2Y1Q8NGV0 311 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 OTOSQ8NHW6 89 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 HAVCR2Q8TDQ0 301 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 C11orf40Q8WZ69 217 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 SLC35B4Q969S0 331 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 FAM131CQ96AQ9 280 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 CLDN23Q96B33 292 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 ZNF845Q96IR2 970 aaPredicted RBP9.53□□□□□ -0.88
CALD1-210ENST00000443197 ALKBH3Q96Q83 286 aaPredicted RBP9.53□□□□□ -0.88
CALD1-210ENST00000443197 ST6GALNAC5Q9BVH7 336 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 RAB33BQ9H082 229 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 SIAEQ9HAT2 523 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 PLEKHB1Q9UF11 243 aaPredicted RBP9.53□□□□□ -0.88
CALD1-210ENST00000443197 RHBDD3Q9Y3P4 386 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 DENND4CQ5VZ89 1909 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 IFITM5A6NNB3 132 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 PLPP2O43688 288 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 UBL3O95164 117 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 RAB3DO95716 219 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 CCL3P10147 92 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 EPXP11678 715 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 CD46P15529 392 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 AKR1C4P17516 323 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 BDH1Q02338 343 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 STK11Q15831 433 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 CCDC58Q4VC31 144 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 SPINK14Q6IE38 97 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 OR5T2Q8NGG2 359 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 ADIPOR1Q96A54 375 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 POTEKPQ9BYX7 375 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 SLC7A11Q9UPY5 501 aa9.53□□□□□ -0.88
CALD1-210ENST00000443197 PRR19A6NJB7 356 aa9.52□□□□□ -0.89
CALD1-210ENST00000443197 PLPP3O14495 311 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms