RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 MCUBQ9NWR8 336 aa5.25□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 DLL3Q9NYJ7 618 aa5.25□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 COPZ2Q9P299 210 aa5.25□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 CLN8Q9UBY8 286 aa5.25□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 NUFIP1Q9UHK0 495 aaKnown RBP5.25□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 ZNF346Q9UL40 294 aaKnown RBP5.25□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 HSPB11Q9Y547 144 aa5.25□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 PHIPQ8WWQ0 1821 aa5.25□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 RPS10-NUDT3A0A1W2PQS6 291 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 PRMT5O14744 637 aaPredicted RBP5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 SLC19A2O60779 497 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 RGS11O94810 467 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 EGFP01133 1207 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 SFTPBP07988 381 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 DANCRP0C864 163 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 SCGB1A1P11684 91 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 GTF2F2P13984 249 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 OGNP20774 298 aaKnown RBP5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 ETV6P41212 452 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 NUDT2P50583 147 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 CRYBA4P53673 196 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 DLK1P80370 383 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 MBTD1Q05BQ5 628 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 ZNF404Q494X3 552 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 ACSM3Q53FZ2 586 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 C1orf220Q5T0J3 134 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 LAIR1Q6GTX8 287 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 FAM45BPQ6NSW5 357 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 AHSA2Q719I0 299 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 TMEM144Q7Z5S9 345 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 PTOV1Q86YD1 416 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 WDFY1Q8IWB7 410 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 UEVLDQ8IX04 471 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 SLC5A8Q8N695 610 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 YIPF7Q8N8F6 280 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 KBTBD8Q8NFY9 601 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 OR1M1Q8NGA1 313 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 OLIG1Q8TAK6 271 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 SMIM12Q96EX1 92 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 C12orf42Q96LP6 360 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 MED18Q9BUE0 208 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 CIPCQ9C0C6 399 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 ING2Q9H160 280 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 EGLN3Q9H6Z9 239 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 KAT8Q9H7Z6 458 aaKnown RBP5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 CUTCQ9NTM9 273 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 ACSS1Q9NUB1 689 aaPredicted RBP5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 MED9Q9NWA0 146 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 IMPAD1Q9NX62 359 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 OPTCQ9UBM4 332 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 SLC9A2Q9UBY0 812 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 KIF25Q9UIL4 384 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 ICAM5Q9UMF0 924 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 FARSAQ9Y285 508 aaKnown RBP5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 TRAPPC4Q9Y296 219 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 CDH10Q9Y6N8 788 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 BRCA1P38398 1863 aaKnown RBP5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 DOCK5Q9H7D0 1870 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 IGSF9BQ9UPX0 1349 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 RLFQ13129 1914 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 ARID2Q68CP9 1835 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 TMEM8BA6NDV4 472 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 VSTM2BA6NLU5 285 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 TSTD3H0UI37 97 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 M0QZ24 198 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 DNASE2O00115 360 aaPredicted RBP5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 CLDN5O00501 218 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 COPEO14579 308 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 PRKRAO75569 313 aaKnown RBP5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 SOX30O94993 753 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 CLDN7O95471 211 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 C2P06681 752 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 ADRB1P08588 477 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 SLC6A8P48029 635 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 VEGFCP49767 419 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 IDH3GP51553 393 aaPredicted RBP5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 CCR6P51684 374 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 ERVK11-1P61568 191 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 CDK3Q00526 305 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 SP4Q02446 784 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 PTGES3Q15185 160 aaKnown RBP5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 LRRC26Q2I0M4 334 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 SDHAF4Q5VUM1 108 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 ZNF770Q6IQ21 691 aaPredicted RBP5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 SH2D5Q6ZV89 423 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 STRADAQ7RTN6 431 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 BCDIN3DQ7Z5W3 292 aaKnown RBP5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 PTAR1Q7Z6K3 402 aaPredicted RBP5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 C9orf62Q8N4C0 152 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 CBR4Q8N4T8 237 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 EMC1Q8N766 993 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 GDPD1Q8N9F7 314 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 C8orf31Q8N9H6 132 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 ZNF738Q8NE65 137 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 OR1J2Q8NGS2 313 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 C1orf54Q8WWF1 131 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 C8orf44Q96CB5 159 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 YIPF6Q96EC8 236 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 VSTM2LQ96N03 204 aa5.24□□□□□ -1.57
ALMS1-IT1-201ENST00000441587 LINC00052Q96N35 136 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms