RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 TLX1P31314 330 aaPredicted RBP18.35■□□□□ 0.53
SHOX2-203ENST00000441443 TMEM31Q5JXX7 168 aa18.35■□□□□ 0.53
SHOX2-203ENST00000441443 LRRC69Q6ZNQ3 347 aa18.35■□□□□ 0.53
SHOX2-203ENST00000441443 DPY19L4Q7Z388 723 aa18.35■□□□□ 0.53
SHOX2-203ENST00000441443 PHPT1Q9NRX4 125 aaPredicted RBP18.35■□□□□ 0.53
SHOX2-203ENST00000441443 SHPKQ9UHJ6 478 aa18.35■□□□□ 0.53
SHOX2-203ENST00000441443 VSIG4Q9Y279 399 aa18.35■□□□□ 0.53
SHOX2-203ENST00000441443 SPEGQ15772 3267 aa18.35■□□□□ 0.53
SHOX2-203ENST00000441443 FCARP24071 287 aa18.34■□□□□ 0.53
SHOX2-203ENST00000441443 PPP1R1AQ13522 171 aa18.34■□□□□ 0.53
SHOX2-203ENST00000441443 ULK3Q6PHR2 472 aa18.34■□□□□ 0.53
SHOX2-203ENST00000441443 PRSS41Q7RTY9 318 aa18.34■□□□□ 0.53
SHOX2-203ENST00000441443 JAZF1Q86VZ6 243 aa18.34■□□□□ 0.53
SHOX2-203ENST00000441443 PPP1R14AQ96A00 147 aa18.34■□□□□ 0.53
SHOX2-203ENST00000441443 RAB7BQ96AH8 199 aa18.34■□□□□ 0.53
SHOX2-203ENST00000441443 LOC100289279A0A1B0GTE1 492 aa18.34■□□□□ 0.53
SHOX2-203ENST00000441443 ZNF736B4DX44 427 aaPredicted RBP18.34■□□□□ 0.53
SHOX2-203ENST00000441443 LINC01565O15544 149 aa18.34■□□□□ 0.53
SHOX2-203ENST00000441443 CYB5AP00167 134 aa18.34■□□□□ 0.53
SHOX2-203ENST00000441443 ZNF735P0CB33 412 aa18.34■□□□□ 0.53
SHOX2-203ENST00000441443 ABOP16442 354 aa18.34■□□□□ 0.53
SHOX2-203ENST00000441443 SKP1P63208 163 aa18.34■□□□□ 0.53
SHOX2-203ENST00000441443 HABP2Q14520 560 aaPredicted RBP18.34■□□□□ 0.53
SHOX2-203ENST00000441443 PGAP1Q75T13 922 aa18.34■□□□□ 0.53
SHOX2-203ENST00000441443 ZNF595Q8IYB9 648 aa18.34■□□□□ 0.53
SHOX2-203ENST00000441443 SAMD14Q8IZD0 417 aaPredicted RBP18.34■□□□□ 0.53
SHOX2-203ENST00000441443 FGF14Q92915 247 aa18.34■□□□□ 0.53
SHOX2-203ENST00000441443 PIK3IP1Q96FE7 263 aa18.34■□□□□ 0.53
SHOX2-203ENST00000441443 MICU1Q9BPX6 476 aa18.34■□□□□ 0.53
SHOX2-203ENST00000441443 WDR76Q9H967 626 aa18.34■□□□□ 0.53
SHOX2-203ENST00000441443 FBXL21Q9UKT6 434 aa18.34■□□□□ 0.53
SHOX2-203ENST00000441443 MYO15AQ9UKN7 3530 aa18.34■□□□□ 0.53
SHOX2-203ENST00000441443 ZNF208O43345 1280 aa18.33■□□□□ 0.53
SHOX2-203ENST00000441443 APODP05090 189 aa18.33■□□□□ 0.53
SHOX2-203ENST00000441443 MELTFP08582 738 aa18.33■□□□□ 0.53
SHOX2-203ENST00000441443 ATXN8OSP0DMR3 200 aa18.33■□□□□ 0.53
SHOX2-203ENST00000441443 PGDP52209 483 aa18.33■□□□□ 0.53
SHOX2-203ENST00000441443 LBX1P52954 281 aa18.33■□□□□ 0.53
SHOX2-203ENST00000441443 NKAPLQ5M9Q1 402 aa18.33■□□□□ 0.53
SHOX2-203ENST00000441443 PARM1Q6UWI2 310 aa18.33■□□□□ 0.53
SHOX2-203ENST00000441443 LINC00114Q6XXX2 140 aa18.33■□□□□ 0.53
SHOX2-203ENST00000441443 C10orf53Q8N6V4 93 aa18.33■□□□□ 0.53
SHOX2-203ENST00000441443 TMEM229BQ8NBD8 167 aa18.33■□□□□ 0.53
SHOX2-203ENST00000441443 OR6S1Q8NH40 331 aa18.33■□□□□ 0.53
SHOX2-203ENST00000441443 PHOSPHO2Q8TCD6 241 aa18.33■□□□□ 0.53
SHOX2-203ENST00000441443 CST11Q9H112 138 aa18.33■□□□□ 0.53
SHOX2-203ENST00000441443 MTIF3Q9H2K0 278 aaKnown RBP18.33■□□□□ 0.53
SHOX2-203ENST00000441443 C13orf42A0A1B0GVH6 325 aa18.33■□□□□ 0.52
SHOX2-203ENST00000441443 C5orf67F2Z3F1 127 aa18.33■□□□□ 0.52
SHOX2-203ENST00000441443 ARPC3O15145 178 aa18.33■□□□□ 0.52
SHOX2-203ENST00000441443 F13BP05160 661 aa18.33■□□□□ 0.52
SHOX2-203ENST00000441443 GFOD2Q3B7J2 385 aa18.33■□□□□ 0.52
SHOX2-203ENST00000441443 OR10K2Q6IF99 312 aa18.33■□□□□ 0.52
SHOX2-203ENST00000441443 LPCAT3Q6P1A2 487 aa18.33■□□□□ 0.52
SHOX2-203ENST00000441443 TMPRSS9Q7Z410 1059 aa18.33■□□□□ 0.52
SHOX2-203ENST00000441443 OR5T3Q8NGG3 340 aa18.33■□□□□ 0.52
SHOX2-203ENST00000441443 STACQ99469 402 aa18.33■□□□□ 0.52
SHOX2-203ENST00000441443 RAB11FIP5Q9BXF6 653 aa18.33■□□□□ 0.52
SHOX2-203ENST00000441443 HRH4Q9H3N8 390 aa18.33■□□□□ 0.52
SHOX2-203ENST00000441443 SEMA6CQ9H3T2 930 aa18.33■□□□□ 0.52
SHOX2-203ENST00000441443 YBX2Q9Y2T7 364 aaKnown RBP18.33■□□□□ 0.52
SHOX2-203ENST00000441443 TRBV23-1A0A0A0MS06 115 aa18.33■□□□□ 0.52
SHOX2-203ENST00000441443 FITM1A5D6W6 292 aa18.33■□□□□ 0.52
SHOX2-203ENST00000441443 IGKV1D-16P01601 117 aa18.33■□□□□ 0.52
SHOX2-203ENST00000441443 S100A9P06702 114 aaKnown RBP18.33■□□□□ 0.52
SHOX2-203ENST00000441443 VAMP1P23763 118 aa18.33■□□□□ 0.52
SHOX2-203ENST00000441443 AIMP2Q13155 320 aaKnown RBP18.33■□□□□ 0.52
SHOX2-203ENST00000441443 ETV3LQ6ZN32 361 aa18.33■□□□□ 0.52
SHOX2-203ENST00000441443 SLC43A2Q8N370 569 aa18.33■□□□□ 0.52
SHOX2-203ENST00000441443 MCHR2Q969V1 340 aa18.33■□□□□ 0.52
SHOX2-203ENST00000441443 AMELYQ99218 206 aa18.33■□□□□ 0.52
SHOX2-203ENST00000441443 MRPS2Q9Y399 296 aaKnown RBP18.33■□□□□ 0.52
SHOX2-203ENST00000441443 DOCK8Q8NF50 2099 aa18.33■□□□□ 0.52
SHOX2-203ENST00000441443 C2orf16Q68DN1 1984 aa18.32■□□□□ 0.52
SHOX2-203ENST00000441443 B3GALT2O43825 422 aa18.32■□□□□ 0.52
SHOX2-203ENST00000441443 SLC35G6P0C7Q6 338 aa18.32■□□□□ 0.52
SHOX2-203ENST00000441443 CD79AP11912 226 aa18.32■□□□□ 0.52
SHOX2-203ENST00000441443 AKR1C3P42330 323 aa18.32■□□□□ 0.52
SHOX2-203ENST00000441443 SRSF4Q08170 494 aaKnown RBP18.32■□□□□ 0.52
SHOX2-203ENST00000441443 ELP5Q8TE02 316 aa18.32■□□□□ 0.52
SHOX2-203ENST00000441443 SEC11CQ9BY50 192 aa18.32■□□□□ 0.52
SHOX2-203ENST00000441443 TMED7Q9Y3B3 224 aa18.32■□□□□ 0.52
SHOX2-203ENST00000441443 KIR3DL2P43630 455 aa18.32■□□□□ 0.52
SHOX2-203ENST00000441443 SCAND1P57086 179 aa18.32■□□□□ 0.52
SHOX2-203ENST00000441443 PEA15Q15121 130 aa18.32■□□□□ 0.52
SHOX2-203ENST00000441443 DCUN1D4Q92564 292 aa18.32■□□□□ 0.52
SHOX2-203ENST00000441443 FOXN4Q96NZ1 517 aa18.32■□□□□ 0.52
SHOX2-203ENST00000441443 ACKR4Q9NPB9 350 aa18.32■□□□□ 0.52
SHOX2-203ENST00000441443 COLCA2A8K830 154 aa18.31■□□□□ 0.52
SHOX2-203ENST00000441443 IL13RA1P78552 427 aa18.31■□□□□ 0.52
SHOX2-203ENST00000441443 NNATQ16517 81 aa18.31■□□□□ 0.52
SHOX2-203ENST00000441443 MOGAT2Q3SYC2 334 aa18.31■□□□□ 0.52
SHOX2-203ENST00000441443 WDR38Q5JTN6 314 aa18.31■□□□□ 0.52
SHOX2-203ENST00000441443 EXOSC6Q5RKV6 272 aaKnown RBP18.31■□□□□ 0.52
SHOX2-203ENST00000441443 RNF141Q8WVD5 230 aa18.31■□□□□ 0.52
SHOX2-203ENST00000441443 TCEAL3Q969E4 200 aa18.31■□□□□ 0.52
SHOX2-203ENST00000441443 TINAGQ9UJW2 476 aa18.31■□□□□ 0.52
SHOX2-203ENST00000441443 SLC22A13Q9Y226 551 aa18.31■□□□□ 0.52
SHOX2-203ENST00000441443 CSAG2Q9Y5P2 127 aa18.31■□□□□ 0.52
SHOX2-203ENST00000441443 SLC22A7Q9Y694 548 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms