RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 ZFAND5O76080 213 aa12.76□□□□□ -0.37
LIMD1-202ENST00000440097 TGM6O95932 706 aa12.76□□□□□ -0.37
LIMD1-202ENST00000440097 ATF1P18846 271 aa12.76□□□□□ -0.37
LIMD1-202ENST00000440097 CENPAP49450 140 aa12.76□□□□□ -0.37
LIMD1-202ENST00000440097 TAS2R43P59537 309 aa12.76□□□□□ -0.37
LIMD1-202ENST00000440097 ACTA2P62736 377 aa12.76□□□□□ -0.37
LIMD1-202ENST00000440097 ACTG2P63267 376 aa12.76□□□□□ -0.37
LIMD1-202ENST00000440097 RIPPLY1Q0D2K3 151 aa12.76□□□□□ -0.37
LIMD1-202ENST00000440097 TMEM255AQ5JRV8 349 aa12.76□□□□□ -0.37
LIMD1-202ENST00000440097 PEAR1Q5VY43 1037 aaPredicted RBP12.76□□□□□ -0.37
LIMD1-202ENST00000440097 MAMDC2Q7Z304 686 aaPredicted RBP12.76□□□□□ -0.37
LIMD1-202ENST00000440097 GRINAQ7Z429 371 aa12.76□□□□□ -0.37
LIMD1-202ENST00000440097 GPR119Q8TDV5 335 aa12.76□□□□□ -0.37
LIMD1-202ENST00000440097 WDR77Q9BQA1 342 aaPredicted RBP12.76□□□□□ -0.37
LIMD1-202ENST00000440097 DEFB126Q9BYW3 111 aa12.76□□□□□ -0.37
LIMD1-202ENST00000440097 ARRDC1-AS1Q9H2J1 176 aa12.76□□□□□ -0.37
LIMD1-202ENST00000440097 MED9Q9NWA0 146 aa12.76□□□□□ -0.37
LIMD1-202ENST00000440097 GLS2Q9UI32 602 aa12.76□□□□□ -0.37
LIMD1-202ENST00000440097 VSTM2BA6NLU5 285 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 GATBO75879 557 aaKnown RBP12.75□□□□□ -0.37
LIMD1-202ENST00000440097 DHODHQ02127 395 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 C17orf67Q0P5P2 114 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 DYRK1AQ13627 763 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 SHEQ5VZ18 495 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 NUBPLQ8TB37 319 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 RHBDD1Q8TEB9 315 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 TMEM234Q8WY98 164 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 ST8SIA2Q92186 375 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 GCDHQ92947 438 aaPredicted RBP12.75□□□□□ -0.37
LIMD1-202ENST00000440097 GPX7Q96SL4 187 aaPredicted RBP12.75□□□□□ -0.37
LIMD1-202ENST00000440097 METTL7AQ9H8H3 244 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 NPDC1Q9NQX5 325 aaPredicted RBP12.75□□□□□ -0.37
LIMD1-202ENST00000440097 EMC3Q9P0I2 261 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 RCE1Q9Y256 329 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 PTRH2Q9Y3E5 179 aaKnown RBP12.75□□□□□ -0.37
LIMD1-202ENST00000440097 CACNA1CQ13936 2221 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 TMEM72A0PK05 275 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 M0R296 226 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 AHSA1O95433 338 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 FGF5P12034 268 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 NFYAP23511 347 aaPredicted RBP12.75□□□□□ -0.37
LIMD1-202ENST00000440097 RAD52P43351 418 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 ACSM3Q53FZ2 586 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 FAM69AQ5T7M9 428 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 C1orf140Q5VVS0 124 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 SLC6A19Q695T7 634 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 FAM122BQ7Z309 247 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.75□□□□□ -0.37
LIMD1-202ENST00000440097 GHSRQ92847 366 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 TSPAN32Q96QS1 320 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 SYT4Q9H2B2 425 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 RXFP3Q9NSD7 469 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 MYOTQ9UBF9 498 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 CAMK2AQ9UQM7 478 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 SLC6A5Q9Y345 797 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 COL5A1P20908 1838 aaPredicted RBP12.75□□□□□ -0.37
LIMD1-202ENST00000440097 TVP23AA6NH52 213 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 A8MVM7 634 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 C9J4A7 227 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 PDCD5O14737 125 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 ARPC1BO15143 372 aaKnown RBP12.75□□□□□ -0.37
LIMD1-202ENST00000440097 PLPP2O43688 288 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 GLCEO94923 617 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 RENP00797 406 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 HLA-DQA2P01906 255 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 PSMB10P40306 273 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 SLC25A25Q6KCM7 469 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 ATRAIDQ6UW56 229 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 PXKQ7Z7A4 578 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 SMIM4Q8WVI0 70 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 LIPHQ8WWY8 451 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 FBXL2Q9UKC9 423 aa12.75□□□□□ -0.37
LIMD1-202ENST00000440097 CNTRLQ7Z7A1 2325 aa12.74□□□□□ -0.37
LIMD1-202ENST00000440097 MCRIP1C9JLW8 97 aa12.74□□□□□ -0.37
LIMD1-202ENST00000440097 GSTZ1O43708 216 aaPredicted RBP12.74□□□□□ -0.37
LIMD1-202ENST00000440097 LDOC1O95751 146 aaPredicted RBP12.74□□□□□ -0.37
LIMD1-202ENST00000440097 IGF2P01344 180 aa12.74□□□□□ -0.37
LIMD1-202ENST00000440097 PSMB1P20618 241 aaKnown RBP12.74□□□□□ -0.37
LIMD1-202ENST00000440097 MPLP40238 635 aa12.74□□□□□ -0.37
LIMD1-202ENST00000440097 CCR9P51686 369 aa12.74□□□□□ -0.37
LIMD1-202ENST00000440097 HLXQ14774 488 aaPredicted RBP12.74□□□□□ -0.37
LIMD1-202ENST00000440097 SLC35D3Q5M8T2 416 aa12.74□□□□□ -0.37
LIMD1-202ENST00000440097 METTL11BQ5VVY1 283 aa12.74□□□□□ -0.37
LIMD1-202ENST00000440097 MISPQ8IVT2 679 aa12.74□□□□□ -0.37
LIMD1-202ENST00000440097 BVESQ8NE79 360 aa12.74□□□□□ -0.37
LIMD1-202ENST00000440097 OR10G3Q8NGC4 313 aa12.74□□□□□ -0.37
LIMD1-202ENST00000440097 PELI1Q96FA3 418 aa12.74□□□□□ -0.37
LIMD1-202ENST00000440097 HRASLSQ9HDD0 168 aa12.74□□□□□ -0.37
LIMD1-202ENST00000440097 SLC39A1Q9NY26 324 aa12.74□□□□□ -0.37
LIMD1-202ENST00000440097 PPP4R1LQ9P1A2 415 aa12.74□□□□□ -0.37
LIMD1-202ENST00000440097 FBXO4Q9UKT5 387 aa12.74□□□□□ -0.37
LIMD1-202ENST00000440097 COPS3Q9UNS2 423 aa12.74□□□□□ -0.37
LIMD1-202ENST00000440097 MUC6Q6W4X9 2439 aa12.74□□□□□ -0.37
LIMD1-202ENST00000440097 TRBV2A0A0J9YWF9 115 aa12.74□□□□□ -0.37
LIMD1-202ENST00000440097 DCTN6O00399 190 aa12.74□□□□□ -0.37
LIMD1-202ENST00000440097 PRAF2O60831 178 aa12.74□□□□□ -0.37
LIMD1-202ENST00000440097 FGF2P09038 288 aa12.74□□□□□ -0.37
LIMD1-202ENST00000440097 EDNRAP25101 427 aa12.74□□□□□ -0.37
LIMD1-202ENST00000440097 KIF26BQ2KJY2 2108 aa12.74□□□□□ -0.37
LIMD1-202ENST00000440097 ISXQ2M1V0 245 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms