RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 OPN4Q9UHM6 478 aa12.2□□□□□ -0.46
HERPUD1-204ENST00000439977 MRPS18BQ9Y676 258 aaKnown RBP12.2□□□□□ -0.46
HERPUD1-204ENST00000439977 FREM3P0C091 2139 aa12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 TRAV36DV7A0A075B6V5 113 aa12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 TMED7-TICAM2A0A0A6YYA0 188 aa12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 OR2M5A3KFT3 312 aa12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 FITM1A5D6W6 292 aa12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 SHISA8B8ZZ34 492 aa12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 ACSM4P0C7M7 580 aa12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 GP1BBP13224 206 aa12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 CPN1P15169 458 aa12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 ABCD3P28288 659 aa12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 MNDAP41218 407 aa12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 FASLGP48023 281 aa12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 CCR5P51681 352 aa12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 RAP2BP61225 183 aa12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 RPL27P61353 136 aaKnown RBP12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 MAMDC2Q7Z304 686 aaPredicted RBP12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 ADGRG3Q86Y34 549 aa12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 ZNF679Q8IYX0 411 aa12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 SPICQ8N5J4 248 aa12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 CMKLR1Q99788 373 aa12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 TINAGL1Q9GZM7 467 aaPredicted RBP12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 ZNF230Q9UIE0 474 aaPredicted RBP12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 FBXO4Q9UKT5 387 aa12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 TMED7Q9Y3B3 224 aa12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 AUP1Q9Y679 476 aa12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 MED12Q93074 2177 aa12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 FAUP35544 74 aaKnown RBP12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 SORDQ00796 357 aa12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 NKPD1Q17RQ9 610 aa12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 MOGAT2Q3SYC2 334 aa12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 EMC4Q5J8M3 183 aa12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 TMEM225Q6GV28 225 aa12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 SLC18B1Q6NT16 456 aa12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 ASB5Q8WWX0 329 aa12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 SLC25A44Q96H78 314 aaPredicted RBP12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 RADILQ96JH8 1075 aa12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 C8orf33Q9H7E9 229 aaPredicted RBP12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 EXOSC3Q9NQT5 275 aaKnown RBP12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 ZNF275Q9NSD4 429 aaPredicted RBP12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 CENPMQ9NSP4 180 aa12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 EMC3Q9P0I2 261 aa12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 LRP12Q9Y561 859 aa12.19□□□□□ -0.46
HERPUD1-204ENST00000439977 LRP4O75096 1905 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 TLCD2A6NGC4 264 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 RHPN2P1A8MT19 583 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 OR2A4O95047 310 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 LDOC1O95751 146 aaPredicted RBP12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 ZNF28P17035 718 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 SEC61A1P61619 476 aaKnown RBP12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 HLXQ14774 488 aaPredicted RBP12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 LRRC37A5PQ49AS3 106 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 SCGB2B2Q4G0G5 96 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 NHLRC3Q5JS37 347 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 STEAP1BQ6NZ63 245 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 OR2AK2Q8NG84 335 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 OR4S1Q8NGB4 309 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 ADAMTS18Q8TE60 1221 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 RBPMSQ93062 196 aaKnown RBP12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 ARL5BQ96KC2 179 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 OR2A7Q96R45 310 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 MRI1Q9BV20 369 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 B3GNT4Q9C0J1 378 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 POFUT1Q9H488 388 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 KCNN3Q9UGI6 736 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 FBXL2Q9UKC9 423 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 LOC100289279A0A1B0GTE1 492 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 LOC105371267A0A1B0GV96 52 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 TCRBV16S1A1N1A0A5B0 115 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 TPD52L2O43399 206 aaKnown RBP12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 ALOX12BO75342 701 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 SPDEFO95238 335 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 FOLR1P15328 257 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 DLX5P56178 289 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 MFSD13AQ14CX5 517 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 C1orf140Q5VVS0 124 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 GALNT16Q8N428 558 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 GALNT11Q8NCW6 608 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 OR1L3Q8NH93 324 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 FAM46BQ96A09 425 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 LINC00052Q96N35 136 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 ZNF285Q96NJ3 590 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 DMRTA2Q96SC8 542 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 DPYSL5Q9BPU6 564 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 GPR27Q9NS67 375 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 MED29Q9NX70 200 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 VDAC3Q9Y277 283 aa12.18□□□□□ -0.46
HERPUD1-204ENST00000439977 SLC22A23A1A5C7 686 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 SLC17A2O00624 439 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 AKAIN1P0CW23 69 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 CD38P28907 300 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 ARRB1P49407 418 aaPredicted RBP12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 MAP2K6P52564 334 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 DMRTC1Q5HYR2 192 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 IDO2Q6ZQW0 420 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 TMUB2Q71RG4 321 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 CD163Q86VB7 1156 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms