RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 STOMP27105 288 aa17.36■□□□□ 0.37
NCKIPSD-206ENST00000439518 TMEM33P57088 247 aa17.36■□□□□ 0.37
NCKIPSD-206ENST00000439518 PSG4Q00888 419 aa17.36■□□□□ 0.37
NCKIPSD-206ENST00000439518 ALKBH6Q3KRA9 238 aa17.36■□□□□ 0.37
NCKIPSD-206ENST00000439518 UGT2A3Q6UWM9 527 aa17.36■□□□□ 0.37
NCKIPSD-206ENST00000439518 FOXL2NBQ6ZUU3 175 aa17.36■□□□□ 0.37
NCKIPSD-206ENST00000439518 FAM156AQ8NDB6 213 aa17.36■□□□□ 0.37
NCKIPSD-206ENST00000439518 OR13C2Q8NGS9 318 aa17.36■□□□□ 0.37
NCKIPSD-206ENST00000439518 HSH2DQ96JZ2 352 aa17.36■□□□□ 0.37
NCKIPSD-206ENST00000439518 SLCO1C1Q9NYB5 712 aa17.36■□□□□ 0.37
NCKIPSD-206ENST00000439518 LOC100509620A0A075B734 347 aa17.35■□□□□ 0.37
NCKIPSD-206ENST00000439518 A6NIZ1 184 aa17.35■□□□□ 0.37
NCKIPSD-206ENST00000439518 NDUFAB1O14561 156 aa17.35■□□□□ 0.37
NCKIPSD-206ENST00000439518 SERPINA1P01009 418 aa17.35■□□□□ 0.37
NCKIPSD-206ENST00000439518 WNT5AP41221 380 aa17.35■□□□□ 0.37
NCKIPSD-206ENST00000439518 MAGEB1P43366 347 aa17.35■□□□□ 0.37
NCKIPSD-206ENST00000439518 GPR6P46095 362 aaPredicted RBP17.35■□□□□ 0.37
NCKIPSD-206ENST00000439518 SLC9A3P48764 834 aa17.35■□□□□ 0.37
NCKIPSD-206ENST00000439518 NUDT2P50583 147 aa17.35■□□□□ 0.37
NCKIPSD-206ENST00000439518 RAP1BP61224 184 aa17.35■□□□□ 0.37
NCKIPSD-206ENST00000439518 RAP1AP62834 184 aa17.35■□□□□ 0.37
NCKIPSD-206ENST00000439518 TBPL2Q6SJ96 375 aa17.35■□□□□ 0.37
NCKIPSD-206ENST00000439518 ZNF730Q6ZMV8 503 aa17.35■□□□□ 0.37
NCKIPSD-206ENST00000439518 TMPRSS11FQ6ZWK6 438 aa17.35■□□□□ 0.37
NCKIPSD-206ENST00000439518 MBOAT2Q6ZWT7 520 aa17.35■□□□□ 0.37
NCKIPSD-206ENST00000439518 FKBP9P1Q75LS8 142 aa17.35■□□□□ 0.37
NCKIPSD-206ENST00000439518 NMNAT1Q9HAN9 279 aaPredicted RBP17.35■□□□□ 0.37
NCKIPSD-206ENST00000439518 ZNF275Q9NSD4 429 aaPredicted RBP17.35■□□□□ 0.37
NCKIPSD-206ENST00000439518 NKIRAS2Q9NYR9 191 aa17.35■□□□□ 0.37
NCKIPSD-206ENST00000439518 ABCD2Q9UBJ2 740 aa17.35■□□□□ 0.37
NCKIPSD-206ENST00000439518 CDC42EP2O14613 210 aa17.34■□□□□ 0.37
NCKIPSD-206ENST00000439518 IGHV3-13P01766 116 aa17.34■□□□□ 0.37
NCKIPSD-206ENST00000439518 CST2P09228 141 aa17.34■□□□□ 0.37
NCKIPSD-206ENST00000439518 ZNF26P17031 533 aaPredicted RBP17.34■□□□□ 0.37
NCKIPSD-206ENST00000439518 LAP3P28838 519 aa17.34■□□□□ 0.37
NCKIPSD-206ENST00000439518 ERVK-25P63136 954 aa17.34■□□□□ 0.37
NCKIPSD-206ENST00000439518 CCNIQ14094 377 aa17.34■□□□□ 0.37
NCKIPSD-206ENST00000439518 PCGF3Q3KNV8 242 aa17.34■□□□□ 0.37
NCKIPSD-206ENST00000439518 ZNF101Q8IZC7 436 aa17.34■□□□□ 0.37
NCKIPSD-206ENST00000439518 OR1J1Q8NGS3 322 aa17.34■□□□□ 0.37
NCKIPSD-206ENST00000439518 AKR7LQ8NHP1 331 aa17.34■□□□□ 0.37
NCKIPSD-206ENST00000439518 CLDND2Q8NHS1 167 aa17.34■□□□□ 0.37
NCKIPSD-206ENST00000439518 KCTD14Q9BQ13 255 aaPredicted RBP17.34■□□□□ 0.37
NCKIPSD-206ENST00000439518 OR2H1Q9GZK4 316 aa17.34■□□□□ 0.37
NCKIPSD-206ENST00000439518 WNT5BQ9H1J7 359 aa17.34■□□□□ 0.37
NCKIPSD-206ENST00000439518 MYLK2Q9H1R3 596 aa17.34■□□□□ 0.37
NCKIPSD-206ENST00000439518 ANKRD19PQ9H560 264 aa17.34■□□□□ 0.37
NCKIPSD-206ENST00000439518 ENPP4Q9Y6X5 453 aa17.34■□□□□ 0.37
NCKIPSD-206ENST00000439518 C5orf49A4QMS7 147 aa17.33■□□□□ 0.36
NCKIPSD-206ENST00000439518 WNT9BO14905 357 aa17.33■□□□□ 0.36
NCKIPSD-206ENST00000439518 NCK1P16333 377 aa17.33■□□□□ 0.36
NCKIPSD-206ENST00000439518 CCNOP22674 350 aa17.33■□□□□ 0.36
NCKIPSD-206ENST00000439518 GPR4P46093 362 aa17.33■□□□□ 0.36
NCKIPSD-206ENST00000439518 CCL8P80075 99 aa17.33■□□□□ 0.36
NCKIPSD-206ENST00000439518 ENDOGQ14249 297 aaKnown RBP17.33■□□□□ 0.36
NCKIPSD-206ENST00000439518 TMEM154Q6P9G4 183 aa17.33■□□□□ 0.36
NCKIPSD-206ENST00000439518 ICA1LQ8NDH6 482 aa17.33■□□□□ 0.36
NCKIPSD-206ENST00000439518 SLC7A13Q8TCU3 470 aa17.33■□□□□ 0.36
NCKIPSD-206ENST00000439518 SNX33Q8WV41 574 aa17.33■□□□□ 0.36
NCKIPSD-206ENST00000439518 ZNF416Q9BWM5 594 aa17.33■□□□□ 0.36
NCKIPSD-206ENST00000439518 TMEFF2Q9UIK5 374 aaPredicted RBP17.33■□□□□ 0.36
NCKIPSD-206ENST00000439518 TIMM10BQ9Y5J6 103 aa17.33■□□□□ 0.36
NCKIPSD-206ENST00000439518 B4DSR2 109 aa17.32■□□□□ 0.36
NCKIPSD-206ENST00000439518 ICMTO60725 284 aa17.32■□□□□ 0.36
NCKIPSD-206ENST00000439518 GDI2P50395 445 aaKnown RBP17.32■□□□□ 0.36
NCKIPSD-206ENST00000439518 DVL1P1P54792 670 aaPredicted RBP17.32■□□□□ 0.36
NCKIPSD-206ENST00000439518 PSME3P61289 254 aa17.32■□□□□ 0.36
NCKIPSD-206ENST00000439518 PCBD1P61457 104 aa17.32■□□□□ 0.36
NCKIPSD-206ENST00000439518 MOGQ16653 247 aa17.32■□□□□ 0.36
NCKIPSD-206ENST00000439518 KRTAP24-1Q3LI83 254 aa17.32■□□□□ 0.36
NCKIPSD-206ENST00000439518 ZBED5Q49AG3 693 aa17.32■□□□□ 0.36
NCKIPSD-206ENST00000439518 ALDH16A1Q8IZ83 802 aa17.32■□□□□ 0.36
NCKIPSD-206ENST00000439518 GTF3AQ92664 365 aaKnown RBP17.32■□□□□ 0.36
NCKIPSD-206ENST00000439518 FAM162AQ96A26 154 aa17.32■□□□□ 0.36
NCKIPSD-206ENST00000439518 CMTM5Q96DZ9 223 aa17.32■□□□□ 0.36
NCKIPSD-206ENST00000439518 MARS2Q96GW9 593 aaKnown RBP17.32■□□□□ 0.36
NCKIPSD-206ENST00000439518 ELAC2Q9BQ52 826 aaKnown RBP17.32■□□□□ 0.36
NCKIPSD-206ENST00000439518 EIF3KQ9UBQ5 218 aaKnown RBP17.32■□□□□ 0.36
NCKIPSD-206ENST00000439518 ADAM18Q9Y3Q7 739 aa17.32■□□□□ 0.36
NCKIPSD-206ENST00000439518 A0A1W2PRQ8 180 aa17.31■□□□□ 0.36
NCKIPSD-206ENST00000439518 PPIHO43447 177 aaKnown RBP17.31■□□□□ 0.36
NCKIPSD-206ENST00000439518 AHCYL1O43865 530 aa17.31■□□□□ 0.36
NCKIPSD-206ENST00000439518 SCG5P05408 212 aa17.31■□□□□ 0.36
NCKIPSD-206ENST00000439518 CD14P08571 375 aa17.31■□□□□ 0.36
NCKIPSD-206ENST00000439518 MSR1P21757 451 aa17.31■□□□□ 0.36
NCKIPSD-206ENST00000439518 MPV17P39210 176 aa17.31■□□□□ 0.36
NCKIPSD-206ENST00000439518 GUCA1AP43080 201 aaPredicted RBP17.31■□□□□ 0.36
NCKIPSD-206ENST00000439518 CRYBB2P43320 205 aa17.31■□□□□ 0.36
NCKIPSD-206ENST00000439518 LMO4P61968 165 aa17.31■□□□□ 0.36
NCKIPSD-206ENST00000439518 DGCR6Q14129 220 aa17.31■□□□□ 0.36
NCKIPSD-206ENST00000439518 ZNF718Q3SXZ3 478 aa17.31■□□□□ 0.36
NCKIPSD-206ENST00000439518 TMEM255AQ5JRV8 349 aa17.31■□□□□ 0.36
NCKIPSD-206ENST00000439518 FAM122BQ7Z309 247 aa17.31■□□□□ 0.36
NCKIPSD-206ENST00000439518 SYT9Q86SS6 491 aa17.31■□□□□ 0.36
NCKIPSD-206ENST00000439518 CYP4Z1Q86W10 505 aa17.31■□□□□ 0.36
NCKIPSD-206ENST00000439518 C7orf34Q96L11 122 aa17.31■□□□□ 0.36
NCKIPSD-206ENST00000439518 Q96M85 177 aa17.31■□□□□ 0.36
NCKIPSD-206ENST00000439518 NARFLQ9H6Q4 476 aa17.31■□□□□ 0.36
NCKIPSD-206ENST00000439518 POLE4Q9NR33 117 aa17.31■□□□□ 0.36
NCKIPSD-206ENST00000439518 NDUFAF4Q9P032 175 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms