RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 RAB39BQ96DA2 213 aa12.05□□□□□ -0.48
LINC01088-201ENST00000437737 RSPO3Q9BXY4 272 aaPredicted RBP12.05□□□□□ -0.48
LINC01088-201ENST00000437737 NMNAT1Q9HAN9 279 aaPredicted RBP12.05□□□□□ -0.48
LINC01088-201ENST00000437737 A4GNTQ9UNA3 340 aa12.05□□□□□ -0.48
LINC01088-201ENST00000437737 A0A1W2PPW3 197 aa12.04□□□□□ -0.48
LINC01088-201ENST00000437737 J3QLI3 93 aa12.04□□□□□ -0.48
LINC01088-201ENST00000437737 NCR1O76036 304 aa12.04□□□□□ -0.48
LINC01088-201ENST00000437737 SEC14L2O76054 403 aa12.04□□□□□ -0.48
LINC01088-201ENST00000437737 DIRAS1O95057 198 aa12.04□□□□□ -0.48
LINC01088-201ENST00000437737 GKN3PP0CG01 181 aa12.04□□□□□ -0.48
LINC01088-201ENST00000437737 ZFP36P26651 326 aaKnown RBP12.04□□□□□ -0.48
LINC01088-201ENST00000437737 IFNGR2P38484 337 aa12.04□□□□□ -0.48
LINC01088-201ENST00000437737 ACAA2P42765 397 aaKnown RBP12.04□□□□□ -0.48
LINC01088-201ENST00000437737 YAP1P46937 504 aaKnown RBP12.04□□□□□ -0.48
LINC01088-201ENST00000437737 P2RY4P51582 365 aa12.04□□□□□ -0.48
LINC01088-201ENST00000437737 CDH12P55289 794 aa12.04□□□□□ -0.48
LINC01088-201ENST00000437737 CLDN17P56750 224 aa12.04□□□□□ -0.48
LINC01088-201ENST00000437737 MRPS11P82912 194 aaKnown RBP12.04□□□□□ -0.48
LINC01088-201ENST00000437737 MVKQ03426 396 aa12.04□□□□□ -0.48
LINC01088-201ENST00000437737 PIN1Q13526 163 aaPredicted RBP12.04□□□□□ -0.48
LINC01088-201ENST00000437737 TRAM2Q15035 370 aa12.04□□□□□ -0.48
LINC01088-201ENST00000437737 OR1Q1Q15612 314 aa12.04□□□□□ -0.48
LINC01088-201ENST00000437737 CEACAM16Q2WEN9 425 aa12.04□□□□□ -0.48
LINC01088-201ENST00000437737 SWT1Q5T5J6 900 aaKnown RBP12.04□□□□□ -0.48
LINC01088-201ENST00000437737 AVPI1Q5T686 147 aa12.04□□□□□ -0.48
LINC01088-201ENST00000437737 WBP2NLQ6ICG8 309 aa12.04□□□□□ -0.48
LINC01088-201ENST00000437737 ULK3Q6PHR2 472 aa12.04□□□□□ -0.48
LINC01088-201ENST00000437737 RRM2BQ7LG56 351 aa12.04□□□□□ -0.48
LINC01088-201ENST00000437737 TSEN54Q7Z6J9 526 aaKnown RBP12.04□□□□□ -0.48
LINC01088-201ENST00000437737 COMTD1Q86VU5 262 aa12.04□□□□□ -0.48
LINC01088-201ENST00000437737 RBM45Q8IUH3 476 aaKnown RBP12.04□□□□□ -0.48
LINC01088-201ENST00000437737 OFCC1Q8IZS5 231 aa12.04□□□□□ -0.48
LINC01088-201ENST00000437737 GPR137CQ8N3F9 429 aa12.04□□□□□ -0.48
LINC01088-201ENST00000437737 RNF217Q8TC41 542 aa12.04□□□□□ -0.48
LINC01088-201ENST00000437737 ADAMTS16Q8TE57 1224 aa12.04□□□□□ -0.48
LINC01088-201ENST00000437737 SLC38A4Q969I6 547 aa12.04□□□□□ -0.48
LINC01088-201ENST00000437737 MPP4Q96JB8 637 aa12.04□□□□□ -0.48
LINC01088-201ENST00000437737 DHRS1Q96LJ7 313 aa12.04□□□□□ -0.48
LINC01088-201ENST00000437737 KRCC1Q9NPI7 259 aaPredicted RBP12.04□□□□□ -0.48
LINC01088-201ENST00000437737 FZR1Q9UM11 496 aa12.04□□□□□ -0.48
LINC01088-201ENST00000437737 RASD1Q9Y272 281 aa12.04□□□□□ -0.48
LINC01088-201ENST00000437737 HTR3EA5X5Y0 456 aa12.03□□□□□ -0.48
LINC01088-201ENST00000437737 ARRDC5A6NEK1 342 aa12.03□□□□□ -0.48
LINC01088-201ENST00000437737 CPSF4LA6NMK7 179 aaKnown RBP12.03□□□□□ -0.48
LINC01088-201ENST00000437737 H0YJX3 145 aa12.03□□□□□ -0.48
LINC01088-201ENST00000437737 RPL36A-HNRNPH2H7BZ11 118 aa12.03□□□□□ -0.48
LINC01088-201ENST00000437737 J3KTA2 159 aa12.03□□□□□ -0.48
LINC01088-201ENST00000437737 FRS3O43559 492 aa12.03□□□□□ -0.48
LINC01088-201ENST00000437737 CDC14BO60729 498 aa12.03□□□□□ -0.48
LINC01088-201ENST00000437737 SLC43A1O75387 559 aa12.03□□□□□ -0.48
LINC01088-201ENST00000437737 RP2O75695 350 aa12.03□□□□□ -0.48
LINC01088-201ENST00000437737 PNMTP11086 282 aa12.03□□□□□ -0.48
LINC01088-201ENST00000437737 NAT2P11245 290 aa12.03□□□□□ -0.48
LINC01088-201ENST00000437737 PRG2P13727 222 aa12.03□□□□□ -0.48
LINC01088-201ENST00000437737 ANXA8P13928 327 aa12.03□□□□□ -0.48
LINC01088-201ENST00000437737 GLRXP35754 106 aa12.03□□□□□ -0.48
LINC01088-201ENST00000437737 GALK2Q01415 458 aa12.03□□□□□ -0.48
LINC01088-201ENST00000437737 NPTX1Q15818 432 aa12.03□□□□□ -0.48
LINC01088-201ENST00000437737 MICAQ29983 383 aa12.03□□□□□ -0.48
LINC01088-201ENST00000437737 LRP11Q86VZ4 500 aa12.03□□□□□ -0.48
LINC01088-201ENST00000437737 CCDC36Q8IYA8 594 aa12.03□□□□□ -0.48
LINC01088-201ENST00000437737 RNF113BQ8IZP6 322 aaKnown RBP12.03□□□□□ -0.48
LINC01088-201ENST00000437737 CADM2Q8N3J6 435 aa12.03□□□□□ -0.48
LINC01088-201ENST00000437737 ANKK1Q8NFD2 765 aa12.03□□□□□ -0.48
LINC01088-201ENST00000437737 GIPC3Q8TF64 312 aa12.03□□□□□ -0.48
LINC01088-201ENST00000437737 DNAJC9Q8WXX5 260 aa12.03□□□□□ -0.48
LINC01088-201ENST00000437737 SLC41A3Q96GZ6 507 aa12.03□□□□□ -0.48
LINC01088-201ENST00000437737 DUX5Q96PT3 197 aa12.03□□□□□ -0.48
LINC01088-201ENST00000437737 CIB1Q99828 191 aa12.03□□□□□ -0.48
LINC01088-201ENST00000437737 RBM4BQ9BQ04 359 aaKnown RBP12.03□□□□□ -0.48
LINC01088-201ENST00000437737 C1QTNF5Q9BXJ0 243 aa12.03□□□□□ -0.48
LINC01088-201ENST00000437737 C7orf69Q9H7B7 122 aa12.03□□□□□ -0.48
LINC01088-201ENST00000437737 C12orf10Q9HB07 376 aa12.03□□□□□ -0.48
LINC01088-201ENST00000437737 GPR35Q9HC97 309 aa12.03□□□□□ -0.48
LINC01088-201ENST00000437737 MYEF2Q9P2K5 600 aaKnown RBP12.03□□□□□ -0.48
LINC01088-201ENST00000437737 DUSP13Q9UII6 198 aa12.03□□□□□ -0.48
LINC01088-201ENST00000437737 OAZ3Q9UMX2 235 aa12.03□□□□□ -0.48
LINC01088-201ENST00000437737 LYVE1Q9Y5Y7 322 aa12.03□□□□□ -0.48
LINC01088-201ENST00000437737 U3KQV3 271 aa12.03□□□□□ -0.48
LINC01088-201ENST00000437737 SAC3D1A6NKF1 404 aa12.02□□□□□ -0.49
LINC01088-201ENST00000437737 A8MVM7 634 aa12.02□□□□□ -0.49
LINC01088-201ENST00000437737 FFAR1O14842 300 aa12.02□□□□□ -0.49
LINC01088-201ENST00000437737 CHP2O43745 196 aa12.02□□□□□ -0.49
LINC01088-201ENST00000437737 TPST2O60704 377 aa12.02□□□□□ -0.49
LINC01088-201ENST00000437737 ZNF432O94892 652 aa12.02□□□□□ -0.49
LINC01088-201ENST00000437737 CCNB2O95067 398 aa12.02□□□□□ -0.49
LINC01088-201ENST00000437737 HPRP00739 348 aa12.02□□□□□ -0.49
LINC01088-201ENST00000437737 CD79AP11912 226 aa12.02□□□□□ -0.49
LINC01088-201ENST00000437737 ZNF43P17038 809 aa12.02□□□□□ -0.49
LINC01088-201ENST00000437737 GTF2E2P29084 291 aaKnown RBP12.02□□□□□ -0.49
LINC01088-201ENST00000437737 RBM34P42696 430 aaKnown RBP12.02□□□□□ -0.49
LINC01088-201ENST00000437737 HSPA13P48723 471 aa12.02□□□□□ -0.49
LINC01088-201ENST00000437737 RPS23P62266 143 aaKnown RBP12.02□□□□□ -0.49
LINC01088-201ENST00000437737 LRRC36Q1X8D7 754 aa12.02□□□□□ -0.49
LINC01088-201ENST00000437737 GSG1Q2KHT4 349 aa12.02□□□□□ -0.49
LINC01088-201ENST00000437737 ALKBH6Q3KRA9 238 aa12.02□□□□□ -0.49
LINC01088-201ENST00000437737 FGD3Q5JSP0 725 aa12.02□□□□□ -0.49
LINC01088-201ENST00000437737 C1orf140Q5VVS0 124 aa12.02□□□□□ -0.49
LINC01088-201ENST00000437737 KDM8Q8N371 416 aa12.02□□□□□ -0.49
LINC01088-201ENST00000437737 SIGLECL1Q8N7X8 197 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms