RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 AQP2P41181 271 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 LIMS1P48059 325 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 PCBD1P61457 104 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 MRPS34P82930 218 aaKnown RBP6.62□□□□□ -1.35
VPS50-203ENST00000436177 RPL18Q07020 188 aaKnown RBP6.62□□□□□ -1.35
VPS50-203ENST00000436177 TAF11Q15544 211 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 SGCAQ16586 387 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 VMACQ2NL98 169 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 ZNF718Q3SXZ3 478 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 PABPC1L2AQ5JQF8 200 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 BEND6Q5SZJ8 279 aaPredicted RBP6.62□□□□□ -1.35
VPS50-203ENST00000436177 SPATA46Q5T0L3 261 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 NHLRC1Q6VVB1 395 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 ZNF771Q7L3S4 317 aaPredicted RBP6.62□□□□□ -1.35
VPS50-203ENST00000436177 ZER1Q7Z7L7 766 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 RBM45Q8IUH3 476 aaKnown RBP6.62□□□□□ -1.35
VPS50-203ENST00000436177 ZNF584Q8IVC4 421 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 WDFY1Q8IWB7 410 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 C1orf174Q8IYL3 243 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 PAQR4Q8N4S7 273 aaPredicted RBP6.62□□□□□ -1.35
VPS50-203ENST00000436177 OR10A6Q8NH74 314 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 FGFBP3Q8TAT2 258 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 NANPQ8TBE9 248 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 ST7LQ8TDW4 575 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 TSPEARQ8WU66 669 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 TMEM239Q8WW34 195 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 ASB10Q8WXI3 467 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 CCL17Q92583 94 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 NSMAFQ92636 917 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 ZNF75AQ96N20 296 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 ZNF347Q96SE7 839 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 WFDC6Q9BQY6 131 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 SIKE1Q9BRV8 207 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 POLR2J2Q9GZM3 115 aaKnown RBP6.62□□□□□ -1.35
VPS50-203ENST00000436177 RACGAP1Q9H0H5 632 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 PCDHAC1Q9H158 963 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 POLR2J3Q9H1A7 115 aaKnown RBP6.62□□□□□ -1.35
VPS50-203ENST00000436177 KAT8Q9H7Z6 458 aaKnown RBP6.62□□□□□ -1.35
VPS50-203ENST00000436177 NANOGQ9H9S0 305 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 SIAEQ9HAT2 523 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 SMURF2Q9HAU4 748 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 NPHS2Q9NP85 383 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 CYSLTR2Q9NS75 346 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 TAS2R5Q9NYW4 299 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 CGGBP1Q9UFW8 167 aaPredicted RBP6.62□□□□□ -1.35
VPS50-203ENST00000436177 A0A1W2PPL8 197 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 C12orf71A8MTZ7 269 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 HMGB1P1B2RPK0 211 aaPredicted RBP6.61□□□□□ -1.35
VPS50-203ENST00000436177 H3BSA7 217 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 WNT9BO14905 357 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 SPRY3O43610 288 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 PLPP2O43688 288 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 TIMM8AO60220 97 aaPredicted RBP6.61□□□□□ -1.35
VPS50-203ENST00000436177 TRMUO75648 421 aaKnown RBP6.61□□□□□ -1.35
VPS50-203ENST00000436177 OR5F1O95221 314 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 SLC2A10O95528 541 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 IGHV3-13P01766 116 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 IGHV2-5P01817 119 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 ASAH2BP0C7U1 165 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 THRBP10828 461 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 FUT1P19526 365 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 GSTM3P21266 225 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 CFPP27918 469 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 CDAP32320 146 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 LIPAP38571 399 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 CRYBB2P43320 205 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 ARHGDIAP52565 204 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 UGT2B15P54855 530 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 HILS1P60008 231 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 PSMA6P60900 246 aaKnown RBP6.61□□□□□ -1.35
VPS50-203ENST00000436177 ERVS71-1P61550 626 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 LMO4P61968 165 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 PPP1CBP62140 327 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 SELPLGQ14242 412 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 MAPRE2Q15555 327 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 LRRC23Q53EV4 343 aaPredicted RBP6.61□□□□□ -1.35
VPS50-203ENST00000436177 ALG10Q5BKT4 473 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 C10orf128Q5T292 105 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 LCE3BQ5TA77 95 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 FAM205BPQ63HN1 556 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 ERICH5Q6P6B1 374 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 USP43Q70EL4 1123 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 C1QL2Q7Z5L3 287 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 SEMA6DQ8NFY4 1073 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 PFN4Q8NHR9 129 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 ABHD4Q8TB40 342 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 FNDC8Q8TC99 324 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 TMEM255BQ8WV15 326 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 IPCEF1Q8WWN9 437 aaPredicted RBP6.61□□□□□ -1.35
VPS50-203ENST00000436177 STON2Q8WXE9 905 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 LZICQ8WZA0 190 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 TSPAN32Q96QS1 320 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 RBP7Q96R05 134 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 DIRC2Q96SL1 478 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 ZNF426Q9BUY5 554 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 ALG12Q9BV10 488 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 RSPO3Q9BXY4 272 aaPredicted RBP6.61□□□□□ -1.35
VPS50-203ENST00000436177 C7orf69Q9H7B7 122 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 ELOVL3Q9HB03 270 aa6.61□□□□□ -1.35
VPS50-203ENST00000436177 WIPI2Q9Y4P8 454 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms