RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 C1orf189Q5VU69 101 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 C1orf140Q5VVS0 124 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 TMEM225Q6GV28 225 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 FAM198BQ6UWH4 519 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 C3P1Q6ZMU1 363 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 ADGRG3Q86Y34 549 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 MUC20Q8N307 709 aaPredicted RBP10.63□□□□□ -0.71
CD44-209ENST00000433892 ASB17Q8WXJ9 295 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 C8orf44Q96CB5 159 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 CHST6Q9GZX3 395 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 EPHA6Q9UF33 1036 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 SLC22A23A1A5C7 686 aa10.62□□□□□ -0.71
CD44-209ENST00000433892 RHPN2P1A8MT19 583 aa10.62□□□□□ -0.71
CD44-209ENST00000433892 ARPC5O15511 151 aa10.62□□□□□ -0.71
CD44-209ENST00000433892 MT-ATP6P00846 226 aa10.62□□□□□ -0.71
CD44-209ENST00000433892 AKAIN1P0CW23 69 aa10.62□□□□□ -0.71
CD44-209ENST00000433892 HLA-DOBP13765 273 aa10.62□□□□□ -0.71
CD44-209ENST00000433892 C4BPBP20851 252 aa10.62□□□□□ -0.71
CD44-209ENST00000433892 CSF2RBP32927 897 aa10.62□□□□□ -0.71
CD44-209ENST00000433892 ARL4DP49703 201 aa10.62□□□□□ -0.71
CD44-209ENST00000433892 POLR2HP52434 150 aaKnown RBP10.62□□□□□ -0.71
CD44-209ENST00000433892 OR1D5P58170 312 aa10.62□□□□□ -0.71
CD44-209ENST00000433892 DCAF7P61962 342 aa10.62□□□□□ -0.71
CD44-209ENST00000433892 EIF2B1Q14232 305 aaKnown RBP10.62□□□□□ -0.71
CD44-209ENST00000433892 SLC38A6Q8IZM9 456 aa10.62□□□□□ -0.71
CD44-209ENST00000433892 TSTD1Q8NFU3 115 aa10.62□□□□□ -0.71
CD44-209ENST00000433892 OR6N1Q8NGY5 312 aa10.62□□□□□ -0.71
CD44-209ENST00000433892 OR1L3Q8NH93 324 aa10.62□□□□□ -0.71
CD44-209ENST00000433892 DUSP19Q8WTR2 217 aa10.62□□□□□ -0.71
CD44-209ENST00000433892 ASB5Q8WWX0 329 aa10.62□□□□□ -0.71
CD44-209ENST00000433892 ZNF587Q96SQ5 575 aaPredicted RBP10.62□□□□□ -0.71
CD44-209ENST00000433892 ABHD6Q9BV23 337 aa10.62□□□□□ -0.71
CD44-209ENST00000433892 TXNIPQ9H3M7 391 aa10.62□□□□□ -0.71
CD44-209ENST00000433892 RDH8Q9NYR8 311 aa10.62□□□□□ -0.71
CD44-209ENST00000433892 MYEF2Q9P2K5 600 aaKnown RBP10.62□□□□□ -0.71
CD44-209ENST00000433892 COPS7AQ9UBW8 275 aa10.62□□□□□ -0.71
CD44-209ENST00000433892 OPN4Q9UHM6 478 aa10.62□□□□□ -0.71
CD44-209ENST00000433892 LRP12Q9Y561 859 aa10.62□□□□□ -0.71
CD44-209ENST00000433892 A0A1W2PR77 199 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 GOSR2O14653 212 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 NPIPB7O75200 414 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 DXOO77932 396 aaKnown RBP10.61□□□□□ -0.71
CD44-209ENST00000433892 ZNF35P13682 527 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 POU3F2P20265 443 aaPredicted RBP10.61□□□□□ -0.71
CD44-209ENST00000433892 IL11P20809 199 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 CFPP27918 469 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 RIDAP52758 137 aaKnown RBP10.61□□□□□ -0.71
CD44-209ENST00000433892 SEC61A1P61619 476 aaKnown RBP10.61□□□□□ -0.71
CD44-209ENST00000433892 ROM1Q03395 351 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 NHLRC3Q5JS37 347 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 GLYATL3Q5SZD4 288 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 FAM166AQ6J272 317 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 KCTD18Q6PI47 426 aaPredicted RBP10.61□□□□□ -0.71
CD44-209ENST00000433892 SHISA6Q6ZSJ9 500 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.61□□□□□ -0.71
CD44-209ENST00000433892 DAZLQ92904 295 aaKnown RBP10.61□□□□□ -0.71
CD44-209ENST00000433892 TMEM138Q9NPI0 162 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 TAS2R4Q9NYW5 299 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 COQ3Q9NZJ6 369 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 VSX1Q9NZR4 365 aaPredicted RBP10.61□□□□□ -0.71
CD44-209ENST00000433892 CGGBP1Q9UFW8 167 aaPredicted RBP10.61□□□□□ -0.71
CD44-209ENST00000433892 MKL2Q9ULH7 1088 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 COA3Q9Y2R0 106 aaPredicted RBP10.61□□□□□ -0.71
CD44-209ENST00000433892 FXYD6-FXYD2A0A087WZ82 144 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 A0A1W2PQD3 144 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 A8MVM7 634 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 PLPP3O14495 311 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 FBLP22087 321 aaKnown RBP10.61□□□□□ -0.71
CD44-209ENST00000433892 CD27P26842 260 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 HSD11B2P80365 405 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 SQSTM1Q13501 440 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 C4orf46Q504U0 113 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 DCAF12L2Q5VW00 463 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 STEAP1BQ6NZ63 245 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 TMEM205Q6UW68 189 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 C16orf47Q6ZP98 133 aaPredicted RBP10.61□□□□□ -0.71
CD44-209ENST00000433892 IDO2Q6ZQW0 420 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 SYT13Q7L8C5 426 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 ZNF627Q7L945 461 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 SLC29A4Q7RTT9 530 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 C17orf82Q86X59 251 aaPredicted RBP10.61□□□□□ -0.71
CD44-209ENST00000433892 CLEC1AQ8NC01 280 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 OR2AK2Q8NG84 335 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 OR51A2Q8NGJ7 313 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 TNFAIP8L1Q8WVP5 186 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 THRSPQ92748 146 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 SLC25A28Q96A46 364 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 PNPLA2Q96AD5 504 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 C1QTNF6Q9BXI9 259 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 TMPRSS13Q9BYE2 586 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 CHRNA10Q9GZZ6 450 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 FXYD6Q9H0Q3 95 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 EXO5Q9H790 373 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 ZMAT3Q9HA38 289 aaKnown RBP10.61□□□□□ -0.71
CD44-209ENST00000433892 ZNF304Q9HCX3 659 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 SLC2A4RGQ9NR83 387 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 CKLFQ9UBR5 152 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 EMC9Q9Y3B6 208 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 UNC13CQ8NB66 2214 aa10.61□□□□□ -0.71
CD44-209ENST00000433892 DCDC2BA2VCK2 349 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms