RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 RACGAP1Q9H0H5 632 aa1.89□□□□□ -2.11
PTPN4-205ENST00000433888 SRMSQ9H3Y6 488 aa1.89□□□□□ -2.11
PTPN4-205ENST00000433888 SYNDIG1Q9H7V2 258 aa1.89□□□□□ -2.11
PTPN4-205ENST00000433888 AGPAT3Q9NRZ7 376 aa1.89□□□□□ -2.11
PTPN4-205ENST00000433888 DDX19BQ9UMR2 479 aa1.89□□□□□ -2.11
PTPN4-205ENST00000433888 ST3GAL6Q9Y274 331 aa1.89□□□□□ -2.11
PTPN4-205ENST00000433888 AK9Q5TCS8 1911 aa1.89□□□□□ -2.11
PTPN4-205ENST00000433888 IGHV7-81A0A0B4J1V7 117 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 GLYATL1P3A0A0U1RQE8 302 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 ZNF726A6NNF4 738 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 USP27XA6NNY8 438 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 K7EMT4 169 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 M0R3G1 203 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 CDC7O00311 574 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 PES1O00541 588 aaKnown RBP1.88□□□□□ -2.11
PTPN4-205ENST00000433888 PLPP1O14494 284 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 ZBTB5O15062 677 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 RRP8O43159 456 aaKnown RBP1.88□□□□□ -2.11
PTPN4-205ENST00000433888 SOX15O60248 233 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 EIF4E2O60573 245 aaKnown RBP1.88□□□□□ -2.11
PTPN4-205ENST00000433888 LYPLA1O75608 230 aaPredicted RBP1.88□□□□□ -2.11
PTPN4-205ENST00000433888 SUPT7LO94864 414 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 OXTP01178 125 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 C2P06681 752 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 SERPINE2P07093 398 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 STAG3L2P0CL84 134 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 ZNF823P16415 610 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 CSNK2A2P19784 350 aaPredicted RBP1.88□□□□□ -2.11
PTPN4-205ENST00000433888 TCN1P20061 433 aaPredicted RBP1.88□□□□□ -2.11
PTPN4-205ENST00000433888 CPN2P22792 545 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 GABRR1P24046 479 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 CD1BP29016 333 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 PRDX3P30048 256 aaKnown RBP1.88□□□□□ -2.11
PTPN4-205ENST00000433888 CASQ1P31415 396 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 MAS1LP35410 378 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 GPR6P46095 362 aaPredicted RBP1.88□□□□□ -2.11
PTPN4-205ENST00000433888 RPS10P46783 165 aaKnown RBP1.88□□□□□ -2.11
PTPN4-205ENST00000433888 YAP1P46937 504 aaKnown RBP1.88□□□□□ -2.11
PTPN4-205ENST00000433888 NPBWR2P48146 333 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 SERPINB8P50452 374 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 SUB1P53999 127 aaKnown RBP eCLIP1.88□□□□□ -2.11
PTPN4-205ENST00000433888 PSMD4P55036 377 aaKnown RBP1.88□□□□□ -2.11
PTPN4-205ENST00000433888 DAOAP59103 153 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 ERVK-25P63136 954 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 SPAG1Q07617 926 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 UNC119Q13432 240 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 ZNF266Q14584 549 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 KIAA0087Q14695 138 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 CYTH1Q15438 398 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 KLHL40Q2TBA0 621 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 PTPN20Q4JDL3 420 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 AADACL4Q5VUY2 407 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 SPECC1LQ69YQ0 1117 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 DNAJC24Q6P3W2 148 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 TTC23LQ6PF05 361 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 SSX9Q7RTT3 188 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 FAM122BQ7Z309 247 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 PPP1R27Q86WC6 154 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 MICU2Q8IYU8 434 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 CMTM8Q8IZV2 173 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 ZADH2Q8N4Q0 377 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 TTC29Q8NA56 475 aaPredicted RBP1.88□□□□□ -2.11
PTPN4-205ENST00000433888 TRPV1Q8NER1 839 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 OR9A1PQ8NGU1 263 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 GLYATL2Q8WU03 294 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 TSEN15Q8WW01 171 aaKnown RBP1.88□□□□□ -2.11
PTPN4-205ENST00000433888 PIH1D2Q8WWB5 315 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 CACNG8Q8WXS5 425 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 OR1E3Q8WZA6 343 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 RDH5Q92781 318 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 TMEM54Q969K7 222 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 TMIGD2Q96BF3 282 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 NRTNQ99748 197 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 ARHGDIGQ99819 225 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 UQCC2Q9BRT2 126 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 CHID1Q9BWS9 393 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 MFFQ9GZY8 342 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 PIGUQ9H490 435 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 CLSTN2Q9H4D0 955 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 CLMPQ9H6B4 373 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 RPF2Q9H7B2 306 aaKnown RBP1.88□□□□□ -2.11
PTPN4-205ENST00000433888 MRPS30Q9NP92 439 aaKnown RBP1.88□□□□□ -2.11
PTPN4-205ENST00000433888 HRASLS2Q9NWW9 162 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 MARCH5Q9NX47 278 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 STOX2Q9P2F5 926 aaPredicted RBP1.88□□□□□ -2.11
PTPN4-205ENST00000433888 CLCF1Q9UBD9 225 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 MTRF1LQ9UGC7 380 aaKnown RBP1.88□□□□□ -2.11
PTPN4-205ENST00000433888 SLC17A4Q9Y2C5 497 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 MRPS18BQ9Y676 258 aaKnown RBP1.88□□□□□ -2.11
PTPN4-205ENST00000433888 CDH10Q9Y6N8 788 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 KIF27Q86VH2 1401 aa1.88□□□□□ -2.11
PTPN4-205ENST00000433888 USP47Q96K76 1375 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 PLEKHG2Q9H7P9 1386 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 KBTBD11-OT1A0A1B0GTJ5 212 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 PSMB11A5LHX3 300 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 C12orf71A8MTZ7 269 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 SERPINE3A8MV23 424 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 ZNF99A8MXY4 864 aaPredicted RBP1.87□□□□□ -2.11
PTPN4-205ENST00000433888 NDUFS8O00217 210 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 SIRPB1O00241 398 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms