RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 TMEM272A0A1B0GTI8 110 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 A0A1W2PPC1 479 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 PLPP3O14495 311 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 LDLRAD4O15165 306 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 FADS1O60427 444 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 SRSF10O75494 262 aaKnown RBP12.3□□□□□ -0.44
COL6A3-207ENST00000433762 AHSA1O95433 338 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 GTF2F2P13984 249 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 RPA2P15927 270 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 ZP3P21754 424 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 MPZP25189 248 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 GFERP55789 205 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 SRSF4Q08170 494 aaKnown RBP12.3□□□□□ -0.44
COL6A3-207ENST00000433762 C1orf100Q5SVJ3 147 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 C1orf140Q5VVS0 124 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 STEAP1BQ6NZ63 245 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 C9orf40Q8IXQ3 194 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 FAM160A2Q8N612 972 aaPredicted RBP12.3□□□□□ -0.44
COL6A3-207ENST00000433762 GPR119Q8TDV5 335 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 ASB5Q8WWX0 329 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 WBP1Q96G27 269 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 CHIAQ9BZP6 476 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 NARFLQ9H6Q4 476 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 R4GMQ9 66 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 CDH23Q9H251 3354 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 TRAV18A0A075B6X5 111 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 A0A1B0GTH9 108 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 LMO7DNF2Z398 122 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 BET1O15155 118 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 CD74P04233 296 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 HTR2CP28335 458 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 CD38P28907 300 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 PTGS2P35354 604 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 SUMO3P55854 103 aaPredicted RBP12.29□□□□□ -0.44
COL6A3-207ENST00000433762 HSD11B2P80365 405 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 HLXQ14774 488 aaPredicted RBP12.29□□□□□ -0.44
COL6A3-207ENST00000433762 C14orf28Q4W4Y0 310 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 PHF19Q5T6S3 580 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 OR5M10Q6IEU7 315 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 ZNF704Q6ZNC4 412 aaPredicted RBP12.29□□□□□ -0.44
COL6A3-207ENST00000433762 ADGRE4PQ86SQ3 457 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 METTL27Q8N6F8 245 aaPredicted RBP12.29□□□□□ -0.44
COL6A3-207ENST00000433762 OR1J4Q8NGS1 313 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 TMEM234Q8WY98 164 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 ST8SIA1Q92185 356 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 TSLPQ969D9 159 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 OMA1Q96E52 524 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 HHLA2Q9UM44 414 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 TMA7Q9Y2S6 64 aaKnown RBP12.29□□□□□ -0.44
COL6A3-207ENST00000433762 MTCH2Q9Y6C9 303 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 SESN1Q9Y6P5 492 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 EXPH5Q8NEV8 1989 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 H0YC42 278 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 HRGP04196 525 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 PTHLHP12272 177 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 ENPP1P22413 925 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 IGFBP4P22692 258 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 LTBRP36941 435 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 SLC26A5P58743 744 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 TDGQ13569 410 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 COL19A1Q14993 1142 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 CLVS2Q5SYC1 327 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 RAB12Q6IQ22 244 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 FAAP20Q6NZ36 180 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 TMUB2Q71RG4 321 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 KMT5CQ86Y97 462 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 GABRG1Q8N1C3 465 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 LMX1AQ8TE12 382 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 SLC41A2Q96JW4 573 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 NUDT16L1Q9BRJ7 211 aaKnown RBP12.29□□□□□ -0.44
COL6A3-207ENST00000433762 ABHD6Q9BV23 337 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 PISDQ9UG56 409 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 CYB5R1Q9UHQ9 305 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 TRIOBPQ9H2D6 2365 aa12.29□□□□□ -0.44
COL6A3-207ENST00000433762 IGHV1OR15-9A0A0B4J2B8 117 aa12.28□□□□□ -0.44
COL6A3-207ENST00000433762 SLC16A7O60669 478 aa12.28□□□□□ -0.44
COL6A3-207ENST00000433762 SCGNO76038 276 aa12.28□□□□□ -0.44
COL6A3-207ENST00000433762 HLA-DQA2P01906 255 aa12.28□□□□□ -0.44
COL6A3-207ENST00000433762 AGTR1P30556 359 aa12.28□□□□□ -0.44
COL6A3-207ENST00000433762 EFNB2P52799 333 aa12.28□□□□□ -0.44
COL6A3-207ENST00000433762 HNRNPKP61978 463 aaKnown RBP eCLIP12.28□□□□□ -0.44
COL6A3-207ENST00000433762 ADAM8P78325 824 aa12.28□□□□□ -0.44
COL6A3-207ENST00000433762 PLA2G7Q13093 441 aa12.28□□□□□ -0.44
COL6A3-207ENST00000433762 ASPHD2Q6ICH7 369 aa12.28□□□□□ -0.44
COL6A3-207ENST00000433762 TSSK4Q6SA08 328 aa12.28□□□□□ -0.44
COL6A3-207ENST00000433762 TMEM205Q6UW68 189 aa12.28□□□□□ -0.44
COL6A3-207ENST00000433762 TTLL10Q6ZVT0 673 aa12.28□□□□□ -0.44
COL6A3-207ENST00000433762 MARCH3Q86UD3 253 aa12.28□□□□□ -0.44
COL6A3-207ENST00000433762 EIF4E3Q8N5X7 224 aaKnown RBP12.28□□□□□ -0.44
COL6A3-207ENST00000433762 PLPP5Q8NEB5 264 aa12.28□□□□□ -0.44
COL6A3-207ENST00000433762 OR51S1Q8NGJ8 323 aa12.28□□□□□ -0.44
COL6A3-207ENST00000433762 GAL3ST4Q96RP7 486 aa12.28□□□□□ -0.44
COL6A3-207ENST00000433762 EDEM2Q9BV94 578 aa12.28□□□□□ -0.44
COL6A3-207ENST00000433762 RTN4RQ9BZR6 473 aa12.28□□□□□ -0.44
COL6A3-207ENST00000433762 FANCFQ9NPI8 374 aa12.28□□□□□ -0.44
COL6A3-207ENST00000433762 SLC2A8Q9NY64 477 aa12.28□□□□□ -0.44
COL6A3-207ENST00000433762 TMEM265A0A087WTH1 108 aa12.28□□□□□ -0.44
COL6A3-207ENST00000433762 MFSD2BA6NFX1 497 aa12.28□□□□□ -0.44
COL6A3-207ENST00000433762 KRBOX1C9JBD0 128 aa12.28□□□□□ -0.44
COL6A3-207ENST00000433762 FTCDNL1E5RQL4 147 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms